RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 LINC01006Q8NI28 216 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 PHLDA1Q8WV24 401 aaPredicted RBP5.24□□□□□ -1.57
SMAD1-202ENST00000394092 PLEKHB2Q96CS7 222 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 CITED2Q99967 270 aaPredicted RBP5.24□□□□□ -1.57
SMAD1-202ENST00000394092 SPANXB1Q9NS25 103 aaPredicted RBP5.24□□□□□ -1.57
SMAD1-202ENST00000394092 FLNAP21333 2647 aaKnown RBP5.24□□□□□ -1.57
SMAD1-202ENST00000394092 AKAP9Q99996 3911 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 IGLV4-3A0A075B6K6 122 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 J3QQQ9 107 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 K7ERU9 68 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 SAP30O75446 220 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 EMP1P54849 157 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 COTL1Q14019 142 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 C12orf74Q32Q52 190 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 LYRM7Q5U5X0 104 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 C11orf44Q8N8P7 122 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 ZNRF2Q8NHG8 242 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 TMEM263Q8WUH6 116 aaKnown RBP5.23□□□□□ -1.57
SMAD1-202ENST00000394092 ZNF479Q96JC4 524 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 MRPL16Q9NX20 251 aaKnown RBP5.23□□□□□ -1.57
SMAD1-202ENST00000394092 XCL2Q9UBD3 114 aa5.23□□□□□ -1.57
SMAD1-202ENST00000394092 SONP18583 2426 aaKnown RBP5.22□□□□□ -1.57
SMAD1-202ENST00000394092 WNK1Q9H4A3 2382 aa5.22□□□□□ -1.57
SMAD1-202ENST00000394092 TMEM223A0PJW6 202 aa5.22□□□□□ -1.57
SMAD1-202ENST00000394092 IGLL5B9A064 214 aa5.22□□□□□ -1.57
SMAD1-202ENST00000394092 K7ERJ3 54 aa5.22□□□□□ -1.57
SMAD1-202ENST00000394092 SMAGPQ0VAQ4 97 aa5.22□□□□□ -1.57
SMAD1-202ENST00000394092 IL17DQ8TAD2 202 aa5.22□□□□□ -1.57
SMAD1-202ENST00000394092 DEFB104AQ8WTQ1 72 aa5.22□□□□□ -1.57
SMAD1-202ENST00000394092 AMELXQ99217 191 aa5.22□□□□□ -1.57
SMAD1-202ENST00000394092 NAA38Q9BRA0 125 aaKnown RBP5.22□□□□□ -1.57
SMAD1-202ENST00000394092 C1QTNF4Q9BXJ3 329 aa5.22□□□□□ -1.57
SMAD1-202ENST00000394092 ZNF469Q96JG9 3925 aaPredicted RBP5.21□□□□□ -1.57
SMAD1-202ENST00000394092 A0A0J9YY99 117 aa5.21□□□□□ -1.57
SMAD1-202ENST00000394092 TRBV10-1A0A0K0K1A3 114 aa5.21□□□□□ -1.57
SMAD1-202ENST00000394092 CIDEAO60543 219 aa5.21□□□□□ -1.57
SMAD1-202ENST00000394092 ZNF22P17026 224 aaPredicted RBP5.21□□□□□ -1.57
SMAD1-202ENST00000394092 AZU1P20160 251 aa5.21□□□□□ -1.57
SMAD1-202ENST00000394092 RRN3P1Q2M238 152 aa5.21□□□□□ -1.57
SMAD1-202ENST00000394092 OCIAD2Q56VL3 154 aa5.21□□□□□ -1.57
SMAD1-202ENST00000394092 HIST2H2BCQ6DN03 193 aa5.21□□□□□ -1.57
SMAD1-202ENST00000394092 C1orf158Q8N1D5 194 aa5.21□□□□□ -1.57
SMAD1-202ENST00000394092 CCDC168Q8NDH2 2452 aa5.21□□□□□ -1.58
SMAD1-202ENST00000394092 IGHV3OR16-12A0A075B7B8 117 aa5.21□□□□□ -1.58
SMAD1-202ENST00000394092 TRGV1A0A0A0MS02 117 aa5.21□□□□□ -1.58
SMAD1-202ENST00000394092 TRAV4A0A0B4J268 109 aa5.21□□□□□ -1.58
SMAD1-202ENST00000394092 TMEM238C9JI98 176 aa5.21□□□□□ -1.58
SMAD1-202ENST00000394092 IGLV1-51P01701 117 aa5.21□□□□□ -1.58
SMAD1-202ENST00000394092 PROK1P58294 105 aa5.21□□□□□ -1.58
SMAD1-202ENST00000394092 MRPS36P82909 103 aaKnown RBP5.21□□□□□ -1.58
SMAD1-202ENST00000394092 RPL36AP83881 106 aaKnown RBP5.21□□□□□ -1.58
SMAD1-202ENST00000394092 RNASE8Q8TDE3 154 aaKnown RBP5.21□□□□□ -1.58
SMAD1-202ENST00000394092 RPL36ALQ969Q0 106 aaKnown RBP5.21□□□□□ -1.58
SMAD1-202ENST00000394092 C16orf74Q96GX8 76 aa5.21□□□□□ -1.58
SMAD1-202ENST00000394092 TIMM21Q9BVV7 248 aa5.21□□□□□ -1.58
SMAD1-202ENST00000394092 NBPF19A0A087WUL8 3843 aa5.2□□□□□ -1.58
SMAD1-202ENST00000394092 A0A0J9YXV3 536 aa5.2□□□□□ -1.58
SMAD1-202ENST00000394092 TINCRA0A1B0GVN0 87 aa5.2□□□□□ -1.58
SMAD1-202ENST00000394092 K7EQD1 137 aa5.2□□□□□ -1.58
SMAD1-202ENST00000394092 UBE2D1P51668 147 aa5.2□□□□□ -1.58
SMAD1-202ENST00000394092 SLC25A29Q8N8R3 303 aa5.2□□□□□ -1.58
SMAD1-202ENST00000394092 OPRPNQ99935 248 aaPredicted RBP5.2□□□□□ -1.58
SMAD1-202ENST00000394092 CHCHD7Q9BUK0 85 aa5.2□□□□□ -1.58
SMAD1-202ENST00000394092 UBE2D4Q9Y2X8 147 aa5.2□□□□□ -1.58
SMAD1-202ENST00000394092 TSPEAR-AS2P59090 65 aa5.19□□□□□ -1.58
SMAD1-202ENST00000394092 DAZ2Q13117 558 aaKnown RBP5.19□□□□□ -1.58
SMAD1-202ENST00000394092 HIST2H2BDQ6DRA6 164 aa5.19□□□□□ -1.58
SMAD1-202ENST00000394092 DGAT2L7PQ6IED9 249 aa5.19□□□□□ -1.58
SMAD1-202ENST00000394092 DAZ4Q86SG3 579 aaKnown RBP5.19□□□□□ -1.58
SMAD1-202ENST00000394092 NDUFA11Q86Y39 141 aa5.19□□□□□ -1.58
SMAD1-202ENST00000394092 DAZ3Q9NR90 486 aaKnown RBP5.19□□□□□ -1.58
SMAD1-202ENST00000394092 F8W1H4 67 aa5.18□□□□□ -1.58
SMAD1-202ENST00000394092 IGHV3-30P01768 117 aa5.18□□□□□ -1.58
SMAD1-202ENST00000394092 PRM2P04554 102 aa5.18□□□□□ -1.58
SMAD1-202ENST00000394092 IGHV3-30-5P0DP03 117 aa5.18□□□□□ -1.58
SMAD1-202ENST00000394092 RBX1P62877 108 aa5.18□□□□□ -1.58
SMAD1-202ENST00000394092 RPL24P83731 157 aaKnown RBP5.18□□□□□ -1.58
SMAD1-202ENST00000394092 Q6ZSN1 163 aa5.18□□□□□ -1.58
SMAD1-202ENST00000394092 GEMIN7Q9H840 131 aaKnown RBP5.18□□□□□ -1.58
SMAD1-202ENST00000394092 PGPEP1Q9NXJ5 209 aa5.18□□□□□ -1.58
SMAD1-202ENST00000394092 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.18□□□□□ -1.58
SMAD1-202ENST00000394092 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.18□□□□□ -1.58
SMAD1-202ENST00000394092 IGHV1-58A0A0C4DH39 117 aa5.18□□□□□ -1.58
SMAD1-202ENST00000394092 IGKV2-29A2NJV5 120 aaPredicted RBP5.18□□□□□ -1.58
SMAD1-202ENST00000394092 PF4P02776 101 aa5.18□□□□□ -1.58
SMAD1-202ENST00000394092 IGHV3-30-3P0DP02 117 aa5.18□□□□□ -1.58
SMAD1-202ENST00000394092 CHD6Q8TD26 2715 aa5.17□□□□□ -1.58
SMAD1-202ENST00000394092 TENM4Q6N022 2769 aa5.17□□□□□ -1.58
SMAD1-202ENST00000394092 IGHV3-38A0A0C4DH36 116 aa5.17□□□□□ -1.58
SMAD1-202ENST00000394092 ADARB2-AS1A8MUL3 147 aa5.17□□□□□ -1.58
SMAD1-202ENST00000394092 APOMO95445 188 aa5.17□□□□□ -1.58
SMAD1-202ENST00000394092 TIRAPP58753 221 aa5.17□□□□□ -1.58
SMAD1-202ENST00000394092 RNF151Q2KHN1 245 aa5.17□□□□□ -1.58
SMAD1-202ENST00000394092 C4orf48Q5BLP8 95 aa5.17□□□□□ -1.58
SMAD1-202ENST00000394092 Q6ZTI0 123 aa5.17□□□□□ -1.58
SMAD1-202ENST00000394092 Q6ZUT4 128 aa5.17□□□□□ -1.58
SMAD1-202ENST00000394092 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
SMAD1-202ENST00000394092 VPS25Q9BRG1 176 aa5.17□□□□□ -1.58
SMAD1-202ENST00000394092 CSDC2Q9Y534 153 aaKnown RBP5.17□□□□□ -1.58
SMAD1-202ENST00000394092 KMT2BQ9UMN6 2715 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms