RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 PDE6GP18545 87 aa6.41□□□□□ -1.38
GABRA1-202ENST00000393943 LMO4P61968 165 aa6.41□□□□□ -1.38
GABRA1-202ENST00000393943 PRORYQ9H606 182 aa6.41□□□□□ -1.38
GABRA1-202ENST00000393943 TRAV25A0A0B4J276 109 aa6.41□□□□□ -1.38
GABRA1-202ENST00000393943 IGHV3-53P01767 116 aa6.41□□□□□ -1.38
GABRA1-202ENST00000393943 ANKHD1Q8IWZ3 2542 aaKnown RBP6.41□□□□□ -1.38
GABRA1-202ENST00000393943 GRNP28799 593 aaKnown RBP6.4□□□□□ -1.38
GABRA1-202ENST00000393943 LINC00526Q96FQ7 95 aa6.4□□□□□ -1.38
GABRA1-202ENST00000393943 ZNF580Q9UK33 172 aa6.4□□□□□ -1.38
GABRA1-202ENST00000393943 TRBV12-3P01733 135 aa6.4□□□□□ -1.38
GABRA1-202ENST00000393943 TSPEAR-AS2P59090 65 aa6.4□□□□□ -1.38
GABRA1-202ENST00000393943 AMELXQ99217 191 aa6.4□□□□□ -1.38
GABRA1-202ENST00000393943 TMEM256-PLSCR3K7ERE1 68 aa6.4□□□□□ -1.39
GABRA1-202ENST00000393943 VPREB3Q9UKI3 123 aa6.4□□□□□ -1.39
GABRA1-202ENST00000393943 SERP2Q8N6R1 65 aa6.39□□□□□ -1.39
GABRA1-202ENST00000393943 XCL2Q9UBD3 114 aa6.39□□□□□ -1.39
GABRA1-202ENST00000393943 CDKN2A-AS1Q9UH64 79 aa6.39□□□□□ -1.39
GABRA1-202ENST00000393943 GOLGB1Q14789 3259 aaKnown RBP6.39□□□□□ -1.39
GABRA1-202ENST00000393943 NDUFC2O95298 119 aa6.39□□□□□ -1.39
GABRA1-202ENST00000393943 RPL18AQ02543 176 aaKnown RBP6.39□□□□□ -1.39
GABRA1-202ENST00000393943 DSCR8Q96T75 97 aa6.39□□□□□ -1.39
GABRA1-202ENST00000393943 ADORA2A-AS1P86434 159 aa6.39□□□□□ -1.39
GABRA1-202ENST00000393943 KIF25-AS1Q9Y6Z4 181 aa6.39□□□□□ -1.39
GABRA1-202ENST00000393943 LINC01548A6NM66 108 aa6.38□□□□□ -1.39
GABRA1-202ENST00000393943 PFN2P35080 140 aa6.38□□□□□ -1.39
GABRA1-202ENST00000393943 CRLF1O75462 422 aa6.38□□□□□ -1.39
GABRA1-202ENST00000393943 DEFB1P60022 68 aa6.38□□□□□ -1.39
GABRA1-202ENST00000393943 LY6DQ14210 128 aa6.38□□□□□ -1.39
GABRA1-202ENST00000393943 Q6JHZ5 121 aa6.38□□□□□ -1.39
GABRA1-202ENST00000393943 UBE2D4Q9Y2X8 147 aa6.38□□□□□ -1.39
GABRA1-202ENST00000393943 BLCAPP62952 87 aa6.38□□□□□ -1.39
GABRA1-202ENST00000393943 C10orf105Q8TEF2 133 aa6.38□□□□□ -1.39
GABRA1-202ENST00000393943 C16orf74Q96GX8 76 aa6.38□□□□□ -1.39
GABRA1-202ENST00000393943 IBA57-AS1B1ANH7 110 aa6.38□□□□□ -1.39
GABRA1-202ENST00000393943 DNAH12Q6ZR08 3092 aa6.37□□□□□ -1.39
GABRA1-202ENST00000393943 DCANP1Q8TF63 244 aa6.37□□□□□ -1.39
GABRA1-202ENST00000393943 LINC00467Q9BRT7 94 aa6.37□□□□□ -1.39
GABRA1-202ENST00000393943 AKAP6Q13023 2319 aa6.37□□□□□ -1.39
GABRA1-202ENST00000393943 MIR7-3HGQ8N6C7 128 aa6.37□□□□□ -1.39
GABRA1-202ENST00000393943 FAM19A4Q96LR4 140 aa6.37□□□□□ -1.39
GABRA1-202ENST00000393943 LECT2O14960 151 aa6.37□□□□□ -1.39
GABRA1-202ENST00000393943 RS1O15537 224 aa6.37□□□□□ -1.39
GABRA1-202ENST00000393943 IGLV1-40P01703 118 aa6.37□□□□□ -1.39
GABRA1-202ENST00000393943 IGHV4-38-2P0DP08 117 aa6.36□□□□□ -1.39
GABRA1-202ENST00000393943 PSMB8P28062 276 aa6.36□□□□□ -1.39
GABRA1-202ENST00000393943 NBL1P41271 181 aa6.36□□□□□ -1.39
GABRA1-202ENST00000393943 IGKV3D-7A0A0C4DH55 119 aa6.36□□□□□ -1.39
GABRA1-202ENST00000393943 IGHV4-61A0A0C4DH41 118 aa6.36□□□□□ -1.39
GABRA1-202ENST00000393943 CEMP1Q6PRD7 247 aaPredicted RBP6.35□□□□□ -1.39
GABRA1-202ENST00000393943 NDUFC2-KCTD14E9PQ53 114 aa6.35□□□□□ -1.39
GABRA1-202ENST00000393943 DEFB112Q30KQ8 113 aa6.35□□□□□ -1.39
GABRA1-202ENST00000393943 DEFB121Q5J5C9 76 aa6.35□□□□□ -1.39
GABRA1-202ENST00000393943 CSDC2Q9Y534 153 aaKnown RBP6.35□□□□□ -1.39
GABRA1-202ENST00000393943 CACNA1BQ00975 2339 aa6.35□□□□□ -1.39
GABRA1-202ENST00000393943 RPL28P46779 137 aaKnown RBP6.34□□□□□ -1.39
GABRA1-202ENST00000393943 IGHV4-59P01825 116 aa6.34□□□□□ -1.39
GABRA1-202ENST00000393943 LINC00315P59091 139 aa6.34□□□□□ -1.39
GABRA1-202ENST00000393943 HAMPP81172 84 aa6.34□□□□□ -1.39
GABRA1-202ENST00000393943 Q6ZQT7 251 aa6.34□□□□□ -1.39
GABRA1-202ENST00000393943 ATP5EP56381 51 aaPredicted RBP6.34□□□□□ -1.39
GABRA1-202ENST00000393943 C14orf132Q9NPU4 83 aa6.34□□□□□ -1.39
GABRA1-202ENST00000393943 CREBBPQ92793 2442 aa6.34□□□□□ -1.4
GABRA1-202ENST00000393943 COL6A6A6NMZ7 2263 aa6.33□□□□□ -1.4
GABRA1-202ENST00000393943 LINC01600Q96MT4 127 aa6.33□□□□□ -1.4
GABRA1-202ENST00000393943 PPDPFQ9H3Y8 114 aa6.33□□□□□ -1.4
GABRA1-202ENST00000393943 C4orf3Q8WVX3 66 aa6.32□□□□□ -1.4
GABRA1-202ENST00000393943 Q9HAA7 133 aa6.32□□□□□ -1.4
GABRA1-202ENST00000393943 NDUFC1O43677 76 aa6.32□□□□□ -1.4
GABRA1-202ENST00000393943 RPS28P62857 69 aaKnown RBP6.32□□□□□ -1.4
GABRA1-202ENST00000393943 RBM3P98179 157 aaKnown RBP6.32□□□□□ -1.4
GABRA1-202ENST00000393943 MUC7Q8TAX7 377 aa6.32□□□□□ -1.4
GABRA1-202ENST00000393943 SPTAN1Q13813 2472 aaKnown RBP6.32□□□□□ -1.4
GABRA1-202ENST00000393943 NACAE9PAV3 2078 aa6.32□□□□□ -1.4
GABRA1-202ENST00000393943 USP17L23D6RBM5 183 aa6.32□□□□□ -1.4
GABRA1-202ENST00000393943 GNLYP22749 145 aa6.32□□□□□ -1.4
GABRA1-202ENST00000393943 MAP6D1Q9H9H5 199 aa6.32□□□□□ -1.4
GABRA1-202ENST00000393943 C3orf56Q8N813 242 aa6.32□□□□□ -1.4
GABRA1-202ENST00000393943 SDIM1Q6ZPB5 146 aa6.31□□□□□ -1.4
GABRA1-202ENST00000393943 NRGNQ92686 78 aa6.31□□□□□ -1.4
GABRA1-202ENST00000393943 NOP10Q9NPE3 64 aaKnown RBP6.31□□□□□ -1.4
GABRA1-202ENST00000393943 FAM236DA0A1B0GTK5 79 aa6.31□□□□□ -1.4
GABRA1-202ENST00000393943 FAM236CP0DP71 79 aa6.31□□□□□ -1.4
GABRA1-202ENST00000393943 CITED2Q99967 270 aaPredicted RBP6.31□□□□□ -1.4
GABRA1-202ENST00000393943 CHCHD7Q9BUK0 85 aa6.31□□□□□ -1.4
GABRA1-202ENST00000393943 LINC00694P0DN24 101 aa6.3□□□□□ -1.4
GABRA1-202ENST00000393943 ADAMTSL4-AS1Q5T5F5 129 aa6.3□□□□□ -1.4
GABRA1-202ENST00000393943 A0A1W2PRX2 142 aa6.3□□□□□ -1.4
GABRA1-202ENST00000393943 SLURP1P55000 103 aa6.3□□□□□ -1.4
GABRA1-202ENST00000393943 RIF1Q5UIP0 2472 aaKnown RBP6.3□□□□□ -1.4
GABRA1-202ENST00000393943 APC2O95996 2303 aa6.3□□□□□ -1.4
GABRA1-202ENST00000393943 TRBV6-4A0A1B0GX49 114 aa6.3□□□□□ -1.4
GABRA1-202ENST00000393943 CRYGAP11844 174 aa6.3□□□□□ -1.4
GABRA1-202ENST00000393943 C5orf38Q86SI9 138 aa6.3□□□□□ -1.4
GABRA1-202ENST00000393943 MED13LQ71F56 2210 aa6.3□□□□□ -1.4
GABRA1-202ENST00000393943 SMIM9A6NGZ8 99 aa6.29□□□□□ -1.4
GABRA1-202ENST00000393943 RPL35AP18077 110 aaKnown RBP6.29□□□□□ -1.4
GABRA1-202ENST00000393943 LINC00242Q5T6M2 205 aa6.29□□□□□ -1.4
GABRA1-202ENST00000393943 IGLV5-45A0A087WSX0 123 aa6.29□□□□□ -1.4
GABRA1-202ENST00000393943 SMIM1B2RUZ4 78 aa6.29□□□□□ -1.4
GABRA1-202ENST00000393943 IGHV4-30-2A0A087WSY4 118 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms