RNA–Protein interactions for RNA: ENST00000393062.6

SPIRE2-202, Transcript of spire type actin nucleation factor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE2, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-202ENST00000393062 CEMP1Q6PRD7 247 aaPredicted RBP15.35■□□□□ 0.05
SPIRE2-202ENST00000393062 CEND1Q8N111 149 aa15.34■□□□□ 0.05
SPIRE2-202ENST00000393062 FAM104AQ969W3 186 aa15.34■□□□□ 0.05
SPIRE2-202ENST00000393062 TENM1Q9UKZ4 2725 aa15.33■□□□□ 0.05
SPIRE2-202ENST00000393062 IGHV3-38A0A0C4DH36 116 aa15.33■□□□□ 0.04
SPIRE2-202ENST00000393062 RS1O15537 224 aa15.33■□□□□ 0.04
SPIRE2-202ENST00000393062 RPL35AP18077 110 aaKnown RBP15.33■□□□□ 0.04
SPIRE2-202ENST00000393062 RNASE8Q8TDE3 154 aaKnown RBP15.33■□□□□ 0.04
SPIRE2-202ENST00000393062 IGLV4-3A0A075B6K6 122 aa15.32■□□□□ 0.04
SPIRE2-202ENST00000393062 TRGV1A0A0A0MS02 117 aa15.32■□□□□ 0.04
SPIRE2-202ENST00000393062 H3BUT2 72 aa15.32■□□□□ 0.04
SPIRE2-202ENST00000393062 K7ERJ3 54 aa15.32■□□□□ 0.04
SPIRE2-202ENST00000393062 TMEM170BQ5T4T1 132 aa15.32■□□□□ 0.04
SPIRE2-202ENST00000393062 IL17DQ8TAD2 202 aa15.32■□□□□ 0.04
SPIRE2-202ENST00000393062 C9orf118A6NHY6 69 aa15.32■□□□□ 0.04
SPIRE2-202ENST00000393062 IGHV3-53P01767 116 aa15.32■□□□□ 0.04
SPIRE2-202ENST00000393062 PHLDA1Q8WV24 401 aaPredicted RBP15.32■□□□□ 0.04
SPIRE2-202ENST00000393062 PLEKHB2Q96CS7 222 aa15.31■□□□□ 0.04
SPIRE2-202ENST00000393062 TM2D2Q9BX73 214 aa15.31■□□□□ 0.04
SPIRE2-202ENST00000393062 Q6ZTI0 123 aa15.31■□□□□ 0.04
SPIRE2-202ENST00000393062 ZNF815PA8K554 130 aa15.3■□□□□ 0.04
SPIRE2-202ENST00000393062 ZNF479Q96JC4 524 aa15.3■□□□□ 0.04
SPIRE2-202ENST00000393062 HIST1H4GQ99525 98 aa15.3■□□□□ 0.04
SPIRE2-202ENST00000393062 RHODO00212 210 aa15.29■□□□□ 0.04
SPIRE2-202ENST00000393062 TSPEAR-AS2P59090 65 aa15.29■□□□□ 0.04
SPIRE2-202ENST00000393062 RNASE13Q5GAN3 156 aaKnown RBP15.29■□□□□ 0.04
SPIRE2-202ENST00000393062 PAPPA-AS1Q5QFB9 102 aa15.29■□□□□ 0.04
SPIRE2-202ENST00000393062 CHCHD7Q9BUK0 85 aa15.29■□□□□ 0.04
SPIRE2-202ENST00000393062 NHP2Q9NX24 153 aaKnown RBP15.29■□□□□ 0.04
SPIRE2-202ENST00000393062 OR4C5Q8NGB2 326 aa15.29■□□□□ 0.04
SPIRE2-202ENST00000393062 TRBV7-3A0A075B6L6 115 aa15.28■□□□□ 0.04
SPIRE2-202ENST00000393062 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.28■□□□□ 0.04
SPIRE2-202ENST00000393062 IGKV2-29A2NJV5 120 aaPredicted RBP15.28■□□□□ 0.04
SPIRE2-202ENST00000393062 SMIM13P0DJ93 91 aa15.28■□□□□ 0.04
SPIRE2-202ENST00000393062 VCX2Q9H322 139 aa15.28■□□□□ 0.04
SPIRE2-202ENST00000393062 A0A0J9YXV3 536 aa15.27■□□□□ 0.04
SPIRE2-202ENST00000393062 NOP10Q9NPE3 64 aaKnown RBP15.27■□□□□ 0.04
SPIRE2-202ENST00000393062 NFE4Q86UQ8 179 aa15.26■□□□□ 0.03
SPIRE2-202ENST00000393062 TMEM263Q8WUH6 116 aaKnown RBP15.26■□□□□ 0.03
SPIRE2-202ENST00000393062 SPATA3Q8NHX4 192 aa15.26■□□□□ 0.03
SPIRE2-202ENST00000393062 HERVK_113P61574 105 aa15.25■□□□□ 0.03
SPIRE2-202ENST00000393062 CMC4P56277 68 aaPredicted RBP15.25■□□□□ 0.03
SPIRE2-202ENST00000393062 TAL2Q16559 108 aa15.25■□□□□ 0.03
SPIRE2-202ENST00000393062 SCGB1D4Q6XE38 83 aa15.25■□□□□ 0.03
SPIRE2-202ENST00000393062 CSNK1G2-AS1Q8NCQ2 148 aa15.25■□□□□ 0.03
SPIRE2-202ENST00000393062 PYGO1Q9Y3Y4 419 aa15.25■□□□□ 0.03
SPIRE2-202ENST00000393062 TRRAPQ9Y4A5 3859 aa15.25■□□□□ 0.03
SPIRE2-202ENST00000393062 NBEAL2Q6ZNJ1 2754 aa15.24■□□□□ 0.03
SPIRE2-202ENST00000393062 PLAC8L1A1L4L8 177 aa15.24■□□□□ 0.03
SPIRE2-202ENST00000393062 NDUFA11Q86Y39 141 aa15.24■□□□□ 0.03
SPIRE2-202ENST00000393062 IGHV3-64A0A075B6Q5 118 aa15.24■□□□□ 0.03
SPIRE2-202ENST00000393062 ZNF22P17026 224 aaPredicted RBP15.24■□□□□ 0.03
SPIRE2-202ENST00000393062 AMELXQ99217 191 aa15.24■□□□□ 0.03
SPIRE2-202ENST00000393062 FAM110AQ9BQ89 295 aa15.24■□□□□ 0.03
SPIRE2-202ENST00000393062 PF4P02776 101 aa15.23■□□□□ 0.03
SPIRE2-202ENST00000393062 DNAJC30Q96LL9 226 aa15.23■□□□□ 0.03
SPIRE2-202ENST00000393062 UBE2D4Q9Y2X8 147 aa15.23■□□□□ 0.03
SPIRE2-202ENST00000393062 GAGE10A6NGK3 116 aa15.22■□□□□ 0.03
SPIRE2-202ENST00000393062 LINC00482Q8N8I6 264 aa15.22■□□□□ 0.03
SPIRE2-202ENST00000393062 TMEM223A0PJW6 202 aa15.22■□□□□ 0.03
SPIRE2-202ENST00000393062 A0A1W2PPM0 123 aa15.21■□□□□ 0.03
SPIRE2-202ENST00000393062 COTL1Q14019 142 aa15.21■□□□□ 0.03
SPIRE2-202ENST00000393062 C12orf74Q32Q52 190 aa15.21■□□□□ 0.02
SPIRE2-202ENST00000393062 F8P00451 2351 aa15.2■□□□□ 0.02
SPIRE2-202ENST00000393062 J3QQQ9 107 aa15.2■□□□□ 0.02
SPIRE2-202ENST00000393062 SAMD5Q5TGI4 173 aa15.2■□□□□ 0.02
SPIRE2-202ENST00000393062 A0A0J9YY99 117 aa15.19■□□□□ 0.02
SPIRE2-202ENST00000393062 SLC25A29Q8N8R3 303 aa15.19■□□□□ 0.02
SPIRE2-202ENST00000393062 ATRQ13535 2644 aa15.19■□□□□ 0.02
SPIRE2-202ENST00000393062 GAGE12BA1L429 117 aa15.18■□□□□ 0.02
SPIRE2-202ENST00000393062 GAGE7O76087 117 aa15.18■□□□□ 0.02
SPIRE2-202ENST00000393062 GAGE12FP0CL80 117 aa15.18■□□□□ 0.02
SPIRE2-202ENST00000393062 GAGE12GP0CL81 117 aa15.18■□□□□ 0.02
SPIRE2-202ENST00000393062 GAGE12IP0CL82 117 aa15.18■□□□□ 0.02
SPIRE2-202ENST00000393062 DAZ2Q13117 558 aaKnown RBP15.18■□□□□ 0.02
SPIRE2-202ENST00000393062 Q6ZUT4 128 aa15.18■□□□□ 0.02
SPIRE2-202ENST00000393062 TRAV4A0A0B4J268 109 aa15.18■□□□□ 0.02
SPIRE2-202ENST00000393062 BAHCC1Q9P281 2608 aa15.17■□□□□ 0.02
SPIRE2-202ENST00000393062 K7EQD1 137 aa15.17■□□□□ 0.02
SPIRE2-202ENST00000393062 SRSF9Q13242 221 aaKnown RBP eCLIP15.17■□□□□ 0.02
SPIRE2-202ENST00000393062 C16orf74Q96GX8 76 aa15.17■□□□□ 0.02
SPIRE2-202ENST00000393062 K7EP34 96 aa15.17■□□□□ 0.02
SPIRE2-202ENST00000393062 MRPS36P82909 103 aaKnown RBP15.17■□□□□ 0.02
SPIRE2-202ENST00000393062 LEPROTO15243 131 aa15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 LGALS3P17931 250 aaKnown RBP15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 NTM-AS1Q6ZSK4 140 aa15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 SPANXA1Q9NS26 97 aa15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 GAGE12JA6NER3 117 aa15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 IGLL5B9A064 214 aa15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 LINC00694P0DN24 101 aa15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 GAGE4Q13068 117 aa15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 GAGE5Q13069 117 aa15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 RRN3P1Q2M238 152 aa15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 GAGE13Q4V321 117 aa15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 C1QTNF4Q9BXJ3 329 aa15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 SPCS1Q9Y6A9 102 aa15.15■□□□□ 0.02
SPIRE2-202ENST00000393062 TRGV2A0A075B6R0 118 aa15.14■□□□□ 0.01
SPIRE2-202ENST00000393062 TRAV8-3A0A0A6YYJ7 113 aa15.14■□□□□ 0.01
SPIRE2-202ENST00000393062 TEP1Q99973 2627 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms