RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TMEM256-PLSCR3K7ERE1 68 aa9.92□□□□□ -0.82
LCA5-202ENST00000392959 P0DMU3 169 aa9.92□□□□□ -0.82
LCA5-202ENST00000392959 FAM231AP0DMU4 169 aa9.92□□□□□ -0.82
LCA5-202ENST00000392959 FAM231CP0DMU5 169 aa9.92□□□□□ -0.82
LCA5-202ENST00000392959 DIRC1Q969H9 104 aa9.92□□□□□ -0.82
LCA5-202ENST00000392959 PRO0255Q9UI72 69 aa9.92□□□□□ -0.82
LCA5-202ENST00000392959 MYCNOSP40205 109 aa9.91□□□□□ -0.82
LCA5-202ENST00000392959 CRIP1P50238 77 aa9.91□□□□□ -0.82
LCA5-202ENST00000392959 C22orf34Q6ZV56 151 aa9.91□□□□□ -0.82
LCA5-202ENST00000392959 IGKV2D-26A0A0A0MRZ7 120 aa9.91□□□□□ -0.82
LCA5-202ENST00000392959 DEFB135Q30KP9 77 aa9.91□□□□□ -0.82
LCA5-202ENST00000392959 C4orf3Q8WVX3 66 aa9.91□□□□□ -0.82
LCA5-202ENST00000392959 MAP6D1Q9H9H5 199 aa9.91□□□□□ -0.82
LCA5-202ENST00000392959 TNFRSF13BO14836 293 aaPredicted RBP9.91□□□□□ -0.82
LCA5-202ENST00000392959 HIST2H2BDQ6DRA6 164 aa9.91□□□□□ -0.82
LCA5-202ENST00000392959 ODF3Q96PU9 254 aa9.91□□□□□ -0.82
LCA5-202ENST00000392959 MP68P56378 58 aa9.9□□□□□ -0.82
LCA5-202ENST00000392959 TIRAPP58753 221 aa9.9□□□□□ -0.82
LCA5-202ENST00000392959 IGF1P05019 195 aa9.9□□□□□ -0.82
LCA5-202ENST00000392959 C14orf132Q9NPU4 83 aa9.9□□□□□ -0.82
LCA5-202ENST00000392959 CDKN2A-AS1Q9UH64 79 aa9.9□□□□□ -0.82
LCA5-202ENST00000392959 KIAA1549Q9HCM3 1950 aa9.9□□□□□ -0.83
LCA5-202ENST00000392959 DEFB4AO15263 64 aa9.9□□□□□ -0.83
LCA5-202ENST00000392959 K7EQG2 157 aa9.89□□□□□ -0.83
LCA5-202ENST00000392959 SPANXB1Q9NS25 103 aaPredicted RBP9.89□□□□□ -0.83
LCA5-202ENST00000392959 HIGD2BQ4VC39 106 aa9.89□□□□□ -0.83
LCA5-202ENST00000392959 ZNF22P17026 224 aaPredicted RBP9.89□□□□□ -0.83
LCA5-202ENST00000392959 MAPKAPK5-AS1Q8N8E1 139 aa9.89□□□□□ -0.83
LCA5-202ENST00000392959 ZNF106Q9H2Y7 1883 aaKnown RBP9.89□□□□□ -0.83
LCA5-202ENST00000392959 PDE6GP18545 87 aa9.88□□□□□ -0.83
LCA5-202ENST00000392959 C5orf47Q569G3 176 aa9.88□□□□□ -0.83
LCA5-202ENST00000392959 NDUFB1O75438 58 aa9.88□□□□□ -0.83
LCA5-202ENST00000392959 MT-ATP8P03928 68 aa9.88□□□□□ -0.83
LCA5-202ENST00000392959 Q6ZTI0 123 aa9.88□□□□□ -0.83
LCA5-202ENST00000392959 TMEM131Q92545 1883 aa9.88□□□□□ -0.83
LCA5-202ENST00000392959 DSCAMO60469 2012 aa9.88□□□□□ -0.83
LCA5-202ENST00000392959 HCFC1P51610 2035 aa9.88□□□□□ -0.83
LCA5-202ENST00000392959 TNRC6BQ9UPQ9 1833 aaKnown RBP9.88□□□□□ -0.83
LCA5-202ENST00000392959 TEX49A0A1B0GTD5 131 aa9.88□□□□□ -0.83
LCA5-202ENST00000392959 ZFAND3Q9H8U3 227 aa9.88□□□□□ -0.83
LCA5-202ENST00000392959 PKIGQ9Y2B9 76 aa9.88□□□□□ -0.83
LCA5-202ENST00000392959 RNF183Q96D59 192 aa9.87□□□□□ -0.83
LCA5-202ENST00000392959 FSTL3O95633 263 aa9.87□□□□□ -0.83
LCA5-202ENST00000392959 EBI3Q14213 229 aa9.87□□□□□ -0.83
LCA5-202ENST00000392959 ZFAND2AQ8N6M9 145 aa9.87□□□□□ -0.83
LCA5-202ENST00000392959 IGLV4-3A0A075B6K6 122 aa9.87□□□□□ -0.83
LCA5-202ENST00000392959 RNF185Q96GF1 192 aa9.87□□□□□ -0.83
LCA5-202ENST00000392959 U3KQK5 164 aa9.87□□□□□ -0.83
LCA5-202ENST00000392959 C20orf173Q96LM9 149 aa9.86□□□□□ -0.83
LCA5-202ENST00000392959 WFDC9Q8NEX5 89 aa9.86□□□□□ -0.83
LCA5-202ENST00000392959 LINC00467Q9BRT7 94 aa9.86□□□□□ -0.83
LCA5-202ENST00000392959 PRB2P02812 416 aaPredicted RBP9.85□□□□□ -0.83
LCA5-202ENST00000392959 NDUFV3P56181 108 aaKnown RBP9.85□□□□□ -0.83
LCA5-202ENST00000392959 TMEM223A0PJW6 202 aa9.85□□□□□ -0.83
LCA5-202ENST00000392959 IGLV2-11P01706 119 aa9.85□□□□□ -0.83
LCA5-202ENST00000392959 CLPSL1A2RUU4 121 aa9.85□□□□□ -0.83
LCA5-202ENST00000392959 LY6LH3BQJ8 138 aa9.85□□□□□ -0.83
LCA5-202ENST00000392959 SMAD5-AS1Q9Y6J3 95 aa9.85□□□□□ -0.83
LCA5-202ENST00000392959 WDR87Q6ZQQ6 2873 aa9.84□□□□□ -0.83
LCA5-202ENST00000392959 M0QY20 66 aa9.84□□□□□ -0.83
LCA5-202ENST00000392959 COX7BP24311 80 aa9.84□□□□□ -0.83
LCA5-202ENST00000392959 ARHGAP32A7KAX9 2087 aa9.83□□□□□ -0.84
LCA5-202ENST00000392959 TLN2Q9Y4G6 2542 aa9.83□□□□□ -0.84
LCA5-202ENST00000392959 LINC00308Q8TCZ7 52 aa9.83□□□□□ -0.84
LCA5-202ENST00000392959 KIAA1549LQ6ZVL6 1849 aa9.83□□□□□ -0.84
LCA5-202ENST00000392959 F8W735 103 aaPredicted RBP9.82□□□□□ -0.84
LCA5-202ENST00000392959 INSL3P51460 131 aa9.82□□□□□ -0.84
LCA5-202ENST00000392959 RBX1P62877 108 aa9.82□□□□□ -0.84
LCA5-202ENST00000392959 TRAV23DV6A0A075B6W5 121 aa9.82□□□□□ -0.84
LCA5-202ENST00000392959 UFSP1Q6NVU6 142 aa9.82□□□□□ -0.84
LCA5-202ENST00000392959 TRIAP1O43715 76 aa9.82□□□□□ -0.84
LCA5-202ENST00000392959 C2orf91Q6ZV80 131 aa9.82□□□□□ -0.84
LCA5-202ENST00000392959 TRBV27A0A0K0K1C4 114 aa9.82□□□□□ -0.84
LCA5-202ENST00000392959 TRBV30A0A0K0K1B3 111 aa9.81□□□□□ -0.84
LCA5-202ENST00000392959 NDUFC2O95298 119 aa9.81□□□□□ -0.84
LCA5-202ENST00000392959 LINC00269Q8N2A0 174 aa9.81□□□□□ -0.84
LCA5-202ENST00000392959 DEFB114Q30KQ6 69 aa9.81□□□□□ -0.84
LCA5-202ENST00000392959 UBE2AP49459 152 aa9.81□□□□□ -0.84
LCA5-202ENST00000392959 DNAJC9-AS1A6NH13 148 aa9.8□□□□□ -0.84
LCA5-202ENST00000392959 UQCRQO14949 82 aa9.8□□□□□ -0.84
LCA5-202ENST00000392959 USP9XQ93008 2570 aaPredicted RBP9.8□□□□□ -0.84
LCA5-202ENST00000392959 REG3AQ06141 175 aa9.8□□□□□ -0.84
LCA5-202ENST00000392959 SRCAPQ6ZRS2 3230 aa9.8□□□□□ -0.84
LCA5-202ENST00000392959 TRBV6-5A0A0K0K1A5 114 aa9.8□□□□□ -0.84
LCA5-202ENST00000392959 UPK3BQ9BT76 320 aa9.8□□□□□ -0.84
LCA5-202ENST00000392959 IBA57-AS1B1ANH7 110 aa9.79□□□□□ -0.84
LCA5-202ENST00000392959 PIK3CD-AS1Q5SR53 167 aa9.79□□□□□ -0.84
LCA5-202ENST00000392959 C20orf197Q8N268 126 aa9.79□□□□□ -0.84
LCA5-202ENST00000392959 NRACQ8N912 160 aa9.79□□□□□ -0.84
LCA5-202ENST00000392959 SETD2Q9BYW2 2564 aaPredicted RBP9.79□□□□□ -0.84
LCA5-202ENST00000392959 SDIM1Q6ZPB5 146 aa9.79□□□□□ -0.84
LCA5-202ENST00000392959 BPY2O14599 106 aa9.79□□□□□ -0.84
LCA5-202ENST00000392959 WFDC11Q8NEX6 87 aa9.78□□□□□ -0.84
LCA5-202ENST00000392959 JMJD1CQ15652 2540 aa9.78□□□□□ -0.84
LCA5-202ENST00000392959 FAM222AQ5U5X8 452 aa9.78□□□□□ -0.84
LCA5-202ENST00000392959 CFAP126Q5VTH2 177 aa9.78□□□□□ -0.84
LCA5-202ENST00000392959 PYGO1Q9Y3Y4 419 aa9.78□□□□□ -0.84
LCA5-202ENST00000392959 C19orf84I3L1E1 186 aa9.78□□□□□ -0.84
LCA5-202ENST00000392959 CHCHD10Q8WYQ3 142 aaPredicted RBP9.78□□□□□ -0.84
LCA5-202ENST00000392959 FAM110AQ9BQ89 295 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms