RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 TMEM167AQ8TBQ9 72 aa8.54□□□□□ -1.04
TRAF3IP2-208ENST00000392556 TMEM263Q8WUH6 116 aaKnown RBP8.53□□□□□ -1.04
TRAF3IP2-208ENST00000392556 B9D2Q9BPU9 175 aa8.53□□□□□ -1.04
TRAF3IP2-208ENST00000392556 NOTCH3Q9UM47 2321 aa8.53□□□□□ -1.04
TRAF3IP2-208ENST00000392556 ASCL2Q99929 193 aa8.52□□□□□ -1.04
TRAF3IP2-208ENST00000392556 E7EUB6 86 aa8.52□□□□□ -1.05
TRAF3IP2-208ENST00000392556 IGHV3-48P01763 117 aa8.52□□□□□ -1.05
TRAF3IP2-208ENST00000392556 ORM1P02763 201 aa8.52□□□□□ -1.05
TRAF3IP2-208ENST00000392556 ELANEP08246 267 aa8.52□□□□□ -1.05
TRAF3IP2-208ENST00000392556 EGR2P11161 476 aaPredicted RBP8.52□□□□□ -1.05
TRAF3IP2-208ENST00000392556 ZNF575Q86XF7 245 aa8.52□□□□□ -1.05
TRAF3IP2-208ENST00000392556 KLK5Q9Y337 293 aaPredicted RBP8.52□□□□□ -1.05
TRAF3IP2-208ENST00000392556 IGHV1-3A0A0C4DH29 117 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 TRBV30A0A0K0K1B3 111 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 CXCL5P42830 114 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 Q8N6K4 173 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 RNF152Q8N8N0 203 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 NRACQ8N912 160 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 LEAP2Q969E1 77 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 TOMM6Q96B49 74 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 DPH3Q96FX2 82 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 C2orf48Q96LS8 159 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 MSRB1Q9NZV6 116 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 OVOL1O14753 267 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 GATA1P15976 413 aaPredicted RBP8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 TMEM258P61165 79 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 C2orf82Q6UX34 121 aa8.51□□□□□ -1.05
TRAF3IP2-208ENST00000392556 KRTAP10-11P60412 298 aa8.5□□□□□ -1.05
TRAF3IP2-208ENST00000392556 HERVK_113P61574 105 aa8.5□□□□□ -1.05
TRAF3IP2-208ENST00000392556 ORMDL2Q53FV1 153 aa8.5□□□□□ -1.05
TRAF3IP2-208ENST00000392556 PAPPA-AS1Q5QFB9 102 aa8.5□□□□□ -1.05
TRAF3IP2-208ENST00000392556 CEMP1Q6PRD7 247 aaPredicted RBP8.5□□□□□ -1.05
TRAF3IP2-208ENST00000392556 KLHL30-AS1Q8NEE0 82 aa8.5□□□□□ -1.05
TRAF3IP2-208ENST00000392556 SCGB3A1Q96QR1 104 aa8.5□□□□□ -1.05
TRAF3IP2-208ENST00000392556 ERCC8Q13216 396 aa8.49□□□□□ -1.05
TRAF3IP2-208ENST00000392556 C10orf99Q6UWK7 81 aa8.49□□□□□ -1.05
TRAF3IP2-208ENST00000392556 LINC00643Q86TS7 51 aa8.49□□□□□ -1.05
TRAF3IP2-208ENST00000392556 WWC2-AS2Q96NR7 200 aa8.49□□□□□ -1.05
TRAF3IP2-208ENST00000392556 SHANK2-AS3Q9BTD1 123 aa8.49□□□□□ -1.05
TRAF3IP2-208ENST00000392556 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.49□□□□□ -1.05
TRAF3IP2-208ENST00000392556 TRACP01848 142 aa8.49□□□□□ -1.05
TRAF3IP2-208ENST00000392556 PDE6HQ13956 83 aa8.49□□□□□ -1.05
TRAF3IP2-208ENST00000392556 C9orf66Q5T8R8 295 aa8.49□□□□□ -1.05
TRAF3IP2-208ENST00000392556 ZNF833PQ6ZTB9 187 aa8.49□□□□□ -1.05
TRAF3IP2-208ENST00000392556 H7C423 109 aa8.48□□□□□ -1.05
TRAF3IP2-208ENST00000392556 CCL24O00175 119 aa8.48□□□□□ -1.05
TRAF3IP2-208ENST00000392556 Q5XG85 94 aa8.48□□□□□ -1.05
TRAF3IP2-208ENST00000392556 C5orf38Q86SI9 138 aa8.48□□□□□ -1.05
TRAF3IP2-208ENST00000392556 Q8N9W7 124 aa8.48□□□□□ -1.05
TRAF3IP2-208ENST00000392556 METTL26Q96S19 204 aa8.48□□□□□ -1.05
TRAF3IP2-208ENST00000392556 LINC00527Q9UJ94 153 aa8.48□□□□□ -1.05
TRAF3IP2-208ENST00000392556 H3BRN7 92 aa8.48□□□□□ -1.05
TRAF3IP2-208ENST00000392556 EIF4EBP3O60516 100 aaPredicted RBP8.48□□□□□ -1.05
TRAF3IP2-208ENST00000392556 IGF1P05019 195 aa8.48□□□□□ -1.05
TRAF3IP2-208ENST00000392556 LYZP61626 148 aa8.48□□□□□ -1.05
TRAF3IP2-208ENST00000392556 C17orf77Q96MU5 243 aa8.48□□□□□ -1.05
TRAF3IP2-208ENST00000392556 HOXD3P31249 432 aaPredicted RBP8.47□□□□□ -1.05
TRAF3IP2-208ENST00000392556 SDIM1Q6ZPB5 146 aa8.47□□□□□ -1.05
TRAF3IP2-208ENST00000392556 C4orf3Q8WVX3 66 aa8.47□□□□□ -1.05
TRAF3IP2-208ENST00000392556 DNAH3Q8TD57 4116 aa8.47□□□□□ -1.05
TRAF3IP2-208ENST00000392556 CNTFRP26992 372 aa8.46□□□□□ -1.05
TRAF3IP2-208ENST00000392556 C4orf26Q17RF5 130 aa8.46□□□□□ -1.05
TRAF3IP2-208ENST00000392556 ZNF256Q9Y2P7 627 aaPredicted RBP8.46□□□□□ -1.05
TRAF3IP2-208ENST00000392556 HIST1H4AP62805 103 aaKnown RBP8.46□□□□□ -1.06
TRAF3IP2-208ENST00000392556 CFHR3Q02985 330 aa8.46□□□□□ -1.06
TRAF3IP2-208ENST00000392556 SMIM2Q9BVW6 85 aa8.46□□□□□ -1.06
TRAF3IP2-208ENST00000392556 ATOX1O00244 68 aa8.45□□□□□ -1.06
TRAF3IP2-208ENST00000392556 C10orf55Q5SWW7 151 aa8.45□□□□□ -1.06
TRAF3IP2-208ENST00000392556 M0R3E3 92 aa8.45□□□□□ -1.06
TRAF3IP2-208ENST00000392556 ZNF80P51504 273 aaPredicted RBP8.45□□□□□ -1.06
TRAF3IP2-208ENST00000392556 UBE2E2Q96LR5 201 aa8.45□□□□□ -1.06
TRAF3IP2-208ENST00000392556 AMELXQ99217 191 aa8.45□□□□□ -1.06
TRAF3IP2-208ENST00000392556 PRO0628Q9UI54 55 aa8.45□□□□□ -1.06
TRAF3IP2-208ENST00000392556 IGLV2-23P01705 113 aa8.44□□□□□ -1.06
TRAF3IP2-208ENST00000392556 ZNF22P17026 224 aaPredicted RBP8.44□□□□□ -1.06
TRAF3IP2-208ENST00000392556 MALP21145 153 aa8.44□□□□□ -1.06
TRAF3IP2-208ENST00000392556 PSMB8P28062 276 aa8.44□□□□□ -1.06
TRAF3IP2-208ENST00000392556 HRCT1Q6UXD1 115 aa8.44□□□□□ -1.06
TRAF3IP2-208ENST00000392556 IGHV3-72A0A0B4J1Y9 119 aa8.44□□□□□ -1.06
TRAF3IP2-208ENST00000392556 IGHV4-4A0A075B6R2 117 aa8.43□□□□□ -1.06
TRAF3IP2-208ENST00000392556 TMEM223A0PJW6 202 aa8.43□□□□□ -1.06
TRAF3IP2-208ENST00000392556 C11orf86A6NJI1 115 aa8.43□□□□□ -1.06
TRAF3IP2-208ENST00000392556 TRIAP1O43715 76 aa8.43□□□□□ -1.06
TRAF3IP2-208ENST00000392556 C18orf65Q6ZTR6 163 aa8.43□□□□□ -1.06
TRAF3IP2-208ENST00000392556 hADV29S1A0JD25 119 aa8.42□□□□□ -1.06
TRAF3IP2-208ENST00000392556 OXTP01178 125 aa8.42□□□□□ -1.06
TRAF3IP2-208ENST00000392556 Q1RN00 199 aa8.42□□□□□ -1.06
TRAF3IP2-208ENST00000392556 VMA21Q3ZAQ7 101 aa8.42□□□□□ -1.06
TRAF3IP2-208ENST00000392556 NPBQ8NG41 125 aa8.42□□□□□ -1.06
TRAF3IP2-208ENST00000392556 IGLV4-69A0A075B6H9 119 aa8.42□□□□□ -1.06
TRAF3IP2-208ENST00000392556 MRGPRG-AS1Q2M3A8 158 aa8.42□□□□□ -1.06
TRAF3IP2-208ENST00000392556 RNF5Q99942 180 aa8.42□□□□□ -1.06
TRAF3IP2-208ENST00000392556 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
TRAF3IP2-208ENST00000392556 C3orf84H3BNL1 204 aa8.41□□□□□ -1.06
TRAF3IP2-208ENST00000392556 NBR2O15453 112 aa8.41□□□□□ -1.06
TRAF3IP2-208ENST00000392556 IGLV1-40P01703 118 aa8.41□□□□□ -1.06
TRAF3IP2-208ENST00000392556 COX6CP09669 75 aa8.41□□□□□ -1.06
TRAF3IP2-208ENST00000392556 C2orf66Q6UXQ4 117 aa8.41□□□□□ -1.06
TRAF3IP2-208ENST00000392556 ZNF491Q8N8L2 437 aa8.41□□□□□ -1.06
TRAF3IP2-208ENST00000392556 JPT2Q9H910 190 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms