RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 NEXN-AS1Q8NBZ9 246 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 HIST1H2BHQ93079 126 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 HIST1H2BNQ99877 126 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 HIST1H2BMQ99879 126 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 Q9UF83 564 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 IGHV3-38A0A0C4DH36 116 aa4.63□□□□□ -1.67
UBBP1-201ENST00000392399 LOC105371267A0A1B0GV96 52 aa4.63□□□□□ -1.67
UBBP1-201ENST00000392399 C5orf52A6NGY3 159 aa4.63□□□□□ -1.67
UBBP1-201ENST00000392399 EIF4EBP3O60516 100 aaPredicted RBP4.63□□□□□ -1.67
UBBP1-201ENST00000392399 PPP1R17O96001 155 aa4.63□□□□□ -1.67
UBBP1-201ENST00000392399 DNAH10OSP0CZ25 163 aa4.63□□□□□ -1.67
UBBP1-201ENST00000392399 RAB4AP20338 218 aa4.63□□□□□ -1.67
UBBP1-201ENST00000392399 Q0VG73 95 aa4.63□□□□□ -1.67
UBBP1-201ENST00000392399 OR10J3Q5JRS4 329 aa4.63□□□□□ -1.67
UBBP1-201ENST00000392399 Q6ZR54 194 aa4.63□□□□□ -1.67
UBBP1-201ENST00000392399 MRAP2Q96G30 205 aa4.63□□□□□ -1.67
UBBP1-201ENST00000392399 DNAH17Q9UFH2 4485 aa4.63□□□□□ -1.67
UBBP1-201ENST00000392399 IGLV2-18A0A075B6J9 118 aa4.62□□□□□ -1.67
UBBP1-201ENST00000392399 TRBV6-8A0A0A6YYG3 113 aa4.62□□□□□ -1.67
UBBP1-201ENST00000392399 TRBV6-5A0A0K0K1A5 114 aa4.62□□□□□ -1.67
UBBP1-201ENST00000392399 EREGO14944 169 aa4.62□□□□□ -1.67
UBBP1-201ENST00000392399 APCSP02743 223 aa4.62□□□□□ -1.67
UBBP1-201ENST00000392399 ESDP10768 282 aa4.62□□□□□ -1.67
UBBP1-201ENST00000392399 CAMPP49913 170 aa4.62□□□□□ -1.67
UBBP1-201ENST00000392399 PKIAP61925 76 aa4.62□□□□□ -1.67
UBBP1-201ENST00000392399 FABP9Q0Z7S8 132 aa4.62□□□□□ -1.67
UBBP1-201ENST00000392399 LINC01556Q5JQF7 62 aa4.62□□□□□ -1.67
UBBP1-201ENST00000392399 FAM104BQ5XKR9 115 aa4.62□□□□□ -1.67
UBBP1-201ENST00000392399 MRPL54Q6P161 138 aaKnown RBP4.62□□□□□ -1.67
UBBP1-201ENST00000392399 C10orf126Q8N4M7 172 aa4.62□□□□□ -1.67
UBBP1-201ENST00000392399 M0R2N4 97 aa4.61□□□□□ -1.67
UBBP1-201ENST00000392399 PPBPP02775 128 aa4.61□□□□□ -1.67
UBBP1-201ENST00000392399 C1orf134Q5TEV5 83 aa4.61□□□□□ -1.67
UBBP1-201ENST00000392399 LINC00336Q6ZUF6 198 aa4.61□□□□□ -1.67
UBBP1-201ENST00000392399 WFDC10BQ8IUB3 73 aa4.61□□□□□ -1.67
UBBP1-201ENST00000392399 AMN1Q8IY45 258 aa4.61□□□□□ -1.67
UBBP1-201ENST00000392399 RNF185Q96GF1 192 aa4.61□□□□□ -1.67
UBBP1-201ENST00000392399 PACRGQ96M98 296 aaPredicted RBP4.61□□□□□ -1.67
UBBP1-201ENST00000392399 CHCHD7Q9BUK0 85 aa4.61□□□□□ -1.67
UBBP1-201ENST00000392399 LAMTOR2Q9Y2Q5 125 aa4.61□□□□□ -1.67
UBBP1-201ENST00000392399 TRBV25-1A0A075B6N4 114 aa4.6□□□□□ -1.67
UBBP1-201ENST00000392399 TRAV26-2A0A0B4J265 109 aa4.6□□□□□ -1.67
UBBP1-201ENST00000392399 NCR2O95944 276 aa4.6□□□□□ -1.67
UBBP1-201ENST00000392399 CKS2P33552 79 aa4.6□□□□□ -1.67
UBBP1-201ENST00000392399 COTL1Q14019 142 aa4.6□□□□□ -1.67
UBBP1-201ENST00000392399 IQCJQ1A5X6 159 aa4.6□□□□□ -1.67
UBBP1-201ENST00000392399 NFE4Q86UQ8 179 aa4.6□□□□□ -1.67
UBBP1-201ENST00000392399 NIT1Q86X76 327 aa4.6□□□□□ -1.67
UBBP1-201ENST00000392399 C6orf223Q8N319 242 aa4.6□□□□□ -1.67
UBBP1-201ENST00000392399 ST20Q9HBF5 79 aa4.6□□□□□ -1.67
UBBP1-201ENST00000392399 FAT2Q9NYQ8 4349 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 A0A087WX48 190 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 IGHV1-24A0A0C4DH33 117 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 TRBV27A0A0K0K1C4 114 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 SDHAF1A6NFY7 115 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 IBA57-AS1B1ANH7 110 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 I3L3M4 83 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 VCYO14598 125 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 PMCHP20382 165 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 POLR2KP53803 58 aaKnown RBP4.59□□□□□ -1.67
UBBP1-201ENST00000392399 NDUFA6P56556 154 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 SNRPEP62304 92 aaKnown RBP4.59□□□□□ -1.67
UBBP1-201ENST00000392399 MRPL51Q4U2R6 128 aaKnown RBP4.59□□□□□ -1.67
UBBP1-201ENST00000392399 NTM-AS1Q6ZSK4 140 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 HIST3H2BBQ8N257 126 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 RPL39LQ96EH5 51 aaKnown RBP4.59□□□□□ -1.67
UBBP1-201ENST00000392399 C20orf78Q9BR46 151 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 ALKBH7Q9BT30 221 aaPredicted RBP4.59□□□□□ -1.67
UBBP1-201ENST00000392399 TMEM70Q9BUB7 260 aa4.59□□□□□ -1.67
UBBP1-201ENST00000392399 TMEM262E9PQX1 116 aa4.58□□□□□ -1.68
UBBP1-201ENST00000392399 H7C423 109 aa4.58□□□□□ -1.68
UBBP1-201ENST00000392399 TCAPO15273 167 aa4.58□□□□□ -1.68
UBBP1-201ENST00000392399 SUMO2P61956 95 aaKnown RBP4.58□□□□□ -1.68
UBBP1-201ENST00000392399 RPL32P62910 135 aaKnown RBP4.58□□□□□ -1.68
UBBP1-201ENST00000392399 LAGE3Q14657 143 aa4.58□□□□□ -1.68
UBBP1-201ENST00000392399 ORMDL3Q8N138 153 aa4.58□□□□□ -1.68
UBBP1-201ENST00000392399 NRACQ8N912 160 aa4.58□□□□□ -1.68
UBBP1-201ENST00000392399 C18orf32Q8TCD1 76 aa4.58□□□□□ -1.68
UBBP1-201ENST00000392399 CHCHD5Q9BSY4 110 aa4.58□□□□□ -1.68
UBBP1-201ENST00000392399 TMEM243Q9BU79 118 aa4.58□□□□□ -1.68
UBBP1-201ENST00000392399 TRAV8-3A0A0A6YYJ7 113 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 A0A1B0GUV1 79 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 D6R8Y8 96 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 RTL8CO15255 209 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 TNFRSF6BO95407 300 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 IGHV3-30P01768 117 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 IGHV3-33P01772 117 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 IGHV3-30-3P0DP02 117 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 IGHV3-30-5P0DP03 117 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 AMTP48728 403 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 CDPF1Q6NVV7 123 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 TMEM18Q96B42 140 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 CHCHD1Q96BP2 118 aaKnown RBP4.57□□□□□ -1.68
UBBP1-201ENST00000392399 KIR2DL4Q99706 377 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 KRTAP1-5Q9BYS1 174 aa4.57□□□□□ -1.68
UBBP1-201ENST00000392399 COX11Q9Y6N1 276 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms