RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 C20orf203Q8NBC4 194 aa7.48□□□□□ -1.21
IGHV4-28-201ENST00000390612 TMEM243Q9BU79 118 aa7.48□□□□□ -1.21
IGHV4-28-201ENST00000390612 TMEM70Q9BUB7 260 aa7.48□□□□□ -1.21
IGHV4-28-201ENST00000390612 TMEM191AQ9H0A3 160 aa7.48□□□□□ -1.21
IGHV4-28-201ENST00000390612 NAT8Q9UHE5 227 aa7.48□□□□□ -1.21
IGHV4-28-201ENST00000390612 TRBV6-5A0A0K0K1A5 114 aa7.47□□□□□ -1.21
IGHV4-28-201ENST00000390612 LECT2O14960 151 aa7.47□□□□□ -1.21
IGHV4-28-201ENST00000390612 MIAQ16674 131 aa7.47□□□□□ -1.21
IGHV4-28-201ENST00000390612 SMIM15Q7Z3B0 74 aa7.47□□□□□ -1.21
IGHV4-28-201ENST00000390612 NUP35Q8NFH5 326 aa7.47□□□□□ -1.21
IGHV4-28-201ENST00000390612 RPL39LQ96EH5 51 aaKnown RBP7.47□□□□□ -1.21
IGHV4-28-201ENST00000390612 RNF185Q96GF1 192 aa7.47□□□□□ -1.21
IGHV4-28-201ENST00000390612 GAS8-AS1O95177 125 aa7.46□□□□□ -1.22
IGHV4-28-201ENST00000390612 COTL1Q14019 142 aa7.46□□□□□ -1.22
IGHV4-28-201ENST00000390612 Q6ZSA8 131 aa7.46□□□□□ -1.22
IGHV4-28-201ENST00000390612 LINC00269Q8N2A0 174 aa7.46□□□□□ -1.22
IGHV4-28-201ENST00000390612 C1orf43Q9BWL3 253 aa7.46□□□□□ -1.22
IGHV4-28-201ENST00000390612 FAM30AQ9NZY2 134 aa7.46□□□□□ -1.22
IGHV4-28-201ENST00000390612 IGLV4-60A0A075B6I1 120 aa7.45□□□□□ -1.22
IGHV4-28-201ENST00000390612 SMIM27A0A1W2PRY6 76 aa7.45□□□□□ -1.22
IGHV4-28-201ENST00000390612 NCR2O95944 276 aa7.45□□□□□ -1.22
IGHV4-28-201ENST00000390612 CRPP02741 224 aa7.45□□□□□ -1.22
IGHV4-28-201ENST00000390612 RAB4AP20338 218 aa7.45□□□□□ -1.22
IGHV4-28-201ENST00000390612 DEFB104AQ8WTQ1 72 aa7.45□□□□□ -1.22
IGHV4-28-201ENST00000390612 SDHAF1A6NFY7 115 aa7.44□□□□□ -1.22
IGHV4-28-201ENST00000390612 POLR2KP53803 58 aaKnown RBP7.44□□□□□ -1.22
IGHV4-28-201ENST00000390612 ADIRFQ15847 76 aa7.44□□□□□ -1.22
IGHV4-28-201ENST00000390612 BORCS7Q96B45 105 aa7.44□□□□□ -1.22
IGHV4-28-201ENST00000390612 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.43□□□□□ -1.22
IGHV4-28-201ENST00000390612 ESDP10768 282 aa7.43□□□□□ -1.22
IGHV4-28-201ENST00000390612 RPS10P46783 165 aaKnown RBP7.43□□□□□ -1.22
IGHV4-28-201ENST00000390612 AMTP48728 403 aa7.43□□□□□ -1.22
IGHV4-28-201ENST00000390612 REG3AQ06141 175 aa7.43□□□□□ -1.22
IGHV4-28-201ENST00000390612 RIGQ13278 110 aa7.43□□□□□ -1.22
IGHV4-28-201ENST00000390612 AMN1Q8IY45 258 aa7.43□□□□□ -1.22
IGHV4-28-201ENST00000390612 MRAP2Q96G30 205 aa7.43□□□□□ -1.22
IGHV4-28-201ENST00000390612 NAT8BQ9UHF3 227 aa7.43□□□□□ -1.22
IGHV4-28-201ENST00000390612 FLG2Q5D862 2391 aaPredicted RBP7.43□□□□□ -1.22
IGHV4-28-201ENST00000390612 TRAV8-4A0A0B4J246 113 aa7.42□□□□□ -1.22
IGHV4-28-201ENST00000390612 TRBV27A0A0K0K1C4 114 aa7.42□□□□□ -1.22
IGHV4-28-201ENST00000390612 USP17L23D6RBM5 183 aa7.42□□□□□ -1.22
IGHV4-28-201ENST00000390612 H7C423 109 aa7.42□□□□□ -1.22
IGHV4-28-201ENST00000390612 C14orf177Q52M58 125 aa7.42□□□□□ -1.22
IGHV4-28-201ENST00000390612 CLPSL2Q6UWE3 100 aa7.42□□□□□ -1.22
IGHV4-28-201ENST00000390612 I3L3M4 83 aa7.41□□□□□ -1.22
IGHV4-28-201ENST00000390612 TSHBP01222 138 aa7.41□□□□□ -1.22
IGHV4-28-201ENST00000390612 FAM104BQ5XKR9 115 aa7.41□□□□□ -1.22
IGHV4-28-201ENST00000390612 NRACQ8N912 160 aa7.41□□□□□ -1.22
IGHV4-28-201ENST00000390612 ST20Q9HBF5 79 aa7.41□□□□□ -1.22
IGHV4-28-201ENST00000390612 A0A1B0GW15 77 aa7.4□□□□□ -1.22
IGHV4-28-201ENST00000390612 A0A1B0GXF2 115 aa7.4□□□□□ -1.22
IGHV4-28-201ENST00000390612 EPM2AB3EWF7 344 aa7.4□□□□□ -1.22
IGHV4-28-201ENST00000390612 UBE2L6O14933 153 aa7.4□□□□□ -1.22
IGHV4-28-201ENST00000390612 PRSS1P07477 247 aa7.4□□□□□ -1.22
IGHV4-28-201ENST00000390612 PMCHP20382 165 aa7.4□□□□□ -1.22
IGHV4-28-201ENST00000390612 LINC01620Q4KN68 170 aa7.4□□□□□ -1.22
IGHV4-28-201ENST00000390612 MYCBP2O75592 4640 aa7.39□□□□□ -1.23
IGHV4-28-201ENST00000390612 IGLV10-54A0A075B6I4 117 aa7.39□□□□□ -1.23
IGHV4-28-201ENST00000390612 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.39□□□□□ -1.23
IGHV4-28-201ENST00000390612 IGKV2-29A2NJV5 120 aaPredicted RBP7.39□□□□□ -1.23
IGHV4-28-201ENST00000390612 SMKR1H3BMG3 65 aa7.39□□□□□ -1.23
IGHV4-28-201ENST00000390612 HLA-DQA1P01909 254 aa7.39□□□□□ -1.23
IGHV4-28-201ENST00000390612 APCSP02743 223 aa7.39□□□□□ -1.23
IGHV4-28-201ENST00000390612 FGF6P10767 208 aa7.39□□□□□ -1.23
IGHV4-28-201ENST00000390612 HAMPP81172 84 aa7.39□□□□□ -1.23
IGHV4-28-201ENST00000390612 MRPL51Q4U2R6 128 aaKnown RBP7.39□□□□□ -1.23
IGHV4-28-201ENST00000390612 DGAT2L7PQ6IED9 249 aa7.39□□□□□ -1.23
IGHV4-28-201ENST00000390612 PKHD1L1Q86WI1 4243 aa7.38□□□□□ -1.23
IGHV4-28-201ENST00000390612 TRBV24-1A0A075B6N3 115 aa7.38□□□□□ -1.23
IGHV4-28-201ENST00000390612 PPP1R17O96001 155 aa7.38□□□□□ -1.23
IGHV4-28-201ENST00000390612 SMR3BP02814 79 aaPredicted RBP7.38□□□□□ -1.23
IGHV4-28-201ENST00000390612 ZNF25P17030 456 aaPredicted RBP7.38□□□□□ -1.23
IGHV4-28-201ENST00000390612 IFITM2Q01629 132 aa7.38□□□□□ -1.23
IGHV4-28-201ENST00000390612 CLLU1Q5K131 121 aa7.38□□□□□ -1.23
IGHV4-28-201ENST00000390612 MRPL52Q86TS9 123 aaKnown RBP7.38□□□□□ -1.23
IGHV4-28-201ENST00000390612 CLRN3Q8NCR9 226 aa7.38□□□□□ -1.23
IGHV4-28-201ENST00000390612 TMEM242Q9NWH2 141 aa7.38□□□□□ -1.23
IGHV4-28-201ENST00000390612 LINC00862A6NCI5 91 aa7.37□□□□□ -1.23
IGHV4-28-201ENST00000390612 VCYO14598 125 aa7.37□□□□□ -1.23
IGHV4-28-201ENST00000390612 CAMPP49913 170 aa7.37□□□□□ -1.23
IGHV4-28-201ENST00000390612 RAB14P61106 215 aa7.37□□□□□ -1.23
IGHV4-28-201ENST00000390612 SUMO2P61956 95 aaKnown RBP7.37□□□□□ -1.23
IGHV4-28-201ENST00000390612 RPL32P62910 135 aaKnown RBP7.37□□□□□ -1.23
IGHV4-28-201ENST00000390612 Q5VSD8 79 aa7.37□□□□□ -1.23
IGHV4-28-201ENST00000390612 C9orf163Q8N9P6 203 aa7.37□□□□□ -1.23
IGHV4-28-201ENST00000390612 PPP1R2P9O14990 202 aa7.36□□□□□ -1.23
IGHV4-28-201ENST00000390612 CNBPP62633 177 aaKnown RBP7.36□□□□□ -1.23
IGHV4-28-201ENST00000390612 PNRC1Q12796 327 aaPredicted RBP7.36□□□□□ -1.23
IGHV4-28-201ENST00000390612 AMMECR1LQ6DCA0 310 aa7.36□□□□□ -1.23
IGHV4-28-201ENST00000390612 CHAC1Q9BUX1 264 aa7.36□□□□□ -1.23
IGHV4-28-201ENST00000390612 DMBT1Q9UGM3 2413 aaPredicted RBP7.35□□□□□ -1.23
IGHV4-28-201ENST00000390612 SLPIP03973 132 aa7.35□□□□□ -1.23
IGHV4-28-201ENST00000390612 HBBP68871 147 aa7.35□□□□□ -1.23
IGHV4-28-201ENST00000390612 MRPL54Q6P161 138 aaKnown RBP7.35□□□□□ -1.23
IGHV4-28-201ENST00000390612 RNASEKQ6P5S7 137 aaKnown RBP7.35□□□□□ -1.23
IGHV4-28-201ENST00000390612 SCXQ7RTU7 201 aa7.35□□□□□ -1.23
IGHV4-28-201ENST00000390612 ATP5L2Q7Z4Y8 100 aa7.35□□□□□ -1.23
IGHV4-28-201ENST00000390612 OR5A1Q8NGJ0 315 aa7.35□□□□□ -1.23
IGHV4-28-201ENST00000390612 C20orf78Q9BR46 151 aa7.35□□□□□ -1.23
IGHV4-28-201ENST00000390612 CDC42SE2Q9NRR3 84 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms