RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 TRAV8-4A0A0B4J246 113 aa6.86□□□□□ -1.31
TRAV4-201ENST00000390426 A0A1B0GUV1 79 aa6.86□□□□□ -1.31
TRAV4-201ENST00000390426 SERTAD4-AS1Q5TG53 156 aa6.86□□□□□ -1.31
TRAV4-201ENST00000390426 NUDT10Q8NFP7 164 aa6.86□□□□□ -1.31
TRAV4-201ENST00000390426 NUDT11Q96G61 164 aa6.86□□□□□ -1.31
TRAV4-201ENST00000390426 BIN3Q9NQY0 253 aa6.86□□□□□ -1.31
TRAV4-201ENST00000390426 UBE2L6O14933 153 aa6.85□□□□□ -1.31
TRAV4-201ENST00000390426 BCL2P10415 239 aa6.85□□□□□ -1.31
TRAV4-201ENST00000390426 AMTP48728 403 aa6.85□□□□□ -1.31
TRAV4-201ENST00000390426 COTL1Q14019 142 aa6.85□□□□□ -1.31
TRAV4-201ENST00000390426 TWIST1Q15672 202 aa6.85□□□□□ -1.31
TRAV4-201ENST00000390426 WDR73Q6P4I2 378 aa6.85□□□□□ -1.31
TRAV4-201ENST00000390426 C9orf62Q8N4C0 152 aa6.85□□□□□ -1.31
TRAV4-201ENST00000390426 DPH3Q96FX2 82 aa6.85□□□□□ -1.31
TRAV4-201ENST00000390426 PGLYRP4Q96LB8 373 aa6.85□□□□□ -1.31
TRAV4-201ENST00000390426 TRAV26-2A0A0B4J265 109 aa6.84□□□□□ -1.31
TRAV4-201ENST00000390426 SLPIP03973 132 aa6.84□□□□□ -1.31
TRAV4-201ENST00000390426 CNBPP62633 177 aaKnown RBP6.84□□□□□ -1.31
TRAV4-201ENST00000390426 GATD1Q8NB37 220 aa6.84□□□□□ -1.31
TRAV4-201ENST00000390426 RNASE7Q9H1E1 156 aaKnown RBP6.84□□□□□ -1.31
TRAV4-201ENST00000390426 AP5S1Q9NUS5 200 aa6.84□□□□□ -1.31
TRAV4-201ENST00000390426 IGHV3-64A0A075B6Q5 118 aa6.83□□□□□ -1.32
TRAV4-201ENST00000390426 IGKV3OR2-268A0A0C4DH90 116 aa6.83□□□□□ -1.32
TRAV4-201ENST00000390426 GAGE12HA6NDE8 117 aa6.83□□□□□ -1.32
TRAV4-201ENST00000390426 CHTF8P0CG12 524 aa6.83□□□□□ -1.32
TRAV4-201ENST00000390426 CTRLP40313 264 aa6.83□□□□□ -1.32
TRAV4-201ENST00000390426 OCC1Q8TAD7 63 aa6.83□□□□□ -1.32
TRAV4-201ENST00000390426 RPP21Q9H633 154 aaKnown RBP6.83□□□□□ -1.32
TRAV4-201ENST00000390426 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.82□□□□□ -1.32
TRAV4-201ENST00000390426 K7EN84 100 aa6.82□□□□□ -1.32
TRAV4-201ENST00000390426 FOXA3P55318 350 aaPredicted RBP6.82□□□□□ -1.32
TRAV4-201ENST00000390426 CIRBPQ14011 172 aaKnown RBP6.82□□□□□ -1.32
TRAV4-201ENST00000390426 SLC51BQ86UW2 128 aa6.82□□□□□ -1.32
TRAV4-201ENST00000390426 A0A087WYN8 130 aa6.81□□□□□ -1.32
TRAV4-201ENST00000390426 AMMECR1LQ6DCA0 310 aa6.81□□□□□ -1.32
TRAV4-201ENST00000390426 Q6ZNX1 250 aa6.81□□□□□ -1.32
TRAV4-201ENST00000390426 TCTE3Q8IZS6 198 aa6.81□□□□□ -1.32
TRAV4-201ENST00000390426 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
TRAV4-201ENST00000390426 CNFNQ9BYD5 112 aa6.81□□□□□ -1.32
TRAV4-201ENST00000390426 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.8□□□□□ -1.32
TRAV4-201ENST00000390426 IGKV2-29A2NJV5 120 aaPredicted RBP6.8□□□□□ -1.32
TRAV4-201ENST00000390426 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
TRAV4-201ENST00000390426 TAGLN2P37802 199 aaKnown RBP6.8□□□□□ -1.32
TRAV4-201ENST00000390426 HIGD2BQ4VC39 106 aa6.8□□□□□ -1.32
TRAV4-201ENST00000390426 RNASEKQ6P5S7 137 aaKnown RBP6.8□□□□□ -1.32
TRAV4-201ENST00000390426 CFAP161Q6P656 301 aa6.8□□□□□ -1.32
TRAV4-201ENST00000390426 SMIM15Q7Z3B0 74 aa6.8□□□□□ -1.32
TRAV4-201ENST00000390426 C15orf56Q8N910 161 aa6.8□□□□□ -1.32
TRAV4-201ENST00000390426 GTSF1Q8WW33 167 aa6.8□□□□□ -1.32
TRAV4-201ENST00000390426 PLA2G2DQ9UNK4 145 aa6.8□□□□□ -1.32
TRAV4-201ENST00000390426 GATCO43716 136 aaKnown RBP6.79□□□□□ -1.32
TRAV4-201ENST00000390426 SPACA4Q8TDM5 124 aa6.79□□□□□ -1.32
TRAV4-201ENST00000390426 CHCHD10Q8WYQ3 142 aaPredicted RBP6.79□□□□□ -1.32
TRAV4-201ENST00000390426 RNF185Q96GF1 192 aa6.79□□□□□ -1.32
TRAV4-201ENST00000390426 LRP1Q07954 4544 aaKnown RBP6.78□□□□□ -1.32
TRAV4-201ENST00000390426 SDHAF1A6NFY7 115 aa6.78□□□□□ -1.32
TRAV4-201ENST00000390426 NCR2O95944 276 aa6.78□□□□□ -1.32
TRAV4-201ENST00000390426 APCSP02743 223 aa6.78□□□□□ -1.32
TRAV4-201ENST00000390426 FGF6P10767 208 aa6.78□□□□□ -1.32
TRAV4-201ENST00000390426 RPS10P46783 165 aaKnown RBP6.78□□□□□ -1.32
TRAV4-201ENST00000390426 COX6A2Q02221 97 aa6.78□□□□□ -1.32
TRAV4-201ENST00000390426 PRSS3P2Q8NHM4 247 aa6.78□□□□□ -1.32
TRAV4-201ENST00000390426 MT1HL1P0DM35 61 aa6.77□□□□□ -1.33
TRAV4-201ENST00000390426 PMCHP20382 165 aa6.77□□□□□ -1.33
TRAV4-201ENST00000390426 CEBPGP53567 150 aa6.77□□□□□ -1.33
TRAV4-201ENST00000390426 Q6ZRU5 148 aa6.77□□□□□ -1.33
TRAV4-201ENST00000390426 PLAC8Q9NZF1 115 aa6.77□□□□□ -1.33
TRAV4-201ENST00000390426 IGKV2-24A0A0C4DH68 120 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 FAM231BA6NCW3 169 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 A8MWL6 223 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 TMEM250H0YL14 139 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 H7C423 109 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 I3L3M4 83 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 PHOX2AO14813 284 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 GAS8-AS1O95177 125 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 BLOC1S1P78537 153 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 FOXI1Q12951 378 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 MAJINQ3KP22 176 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 TEX261Q6UWH6 196 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 ALKAL2Q6UX46 152 aa6.76□□□□□ -1.33
TRAV4-201ENST00000390426 GVQW2A0A096LPI5 108 aaPredicted RBP6.75□□□□□ -1.33
TRAV4-201ENST00000390426 NDUFS6O75380 124 aaKnown RBP6.75□□□□□ -1.33
TRAV4-201ENST00000390426 XCL1P47992 114 aa6.75□□□□□ -1.33
TRAV4-201ENST00000390426 FAM231DQ6ZW35 169 aa6.75□□□□□ -1.33
TRAV4-201ENST00000390426 OR5A1Q8NGJ0 315 aa6.75□□□□□ -1.33
TRAV4-201ENST00000390426 C7orf33Q8WU49 177 aa6.75□□□□□ -1.33
TRAV4-201ENST00000390426 TMEM101Q96IK0 257 aa6.75□□□□□ -1.33
TRAV4-201ENST00000390426 BTF3L4Q96K17 158 aa6.75□□□□□ -1.33
TRAV4-201ENST00000390426 TRBV6-5A0A0K0K1A5 114 aa6.74□□□□□ -1.33
TRAV4-201ENST00000390426 CCL25O15444 150 aa6.74□□□□□ -1.33
TRAV4-201ENST00000390426 TSHBP01222 138 aa6.74□□□□□ -1.33
TRAV4-201ENST00000390426 ZNF25P17030 456 aaPredicted RBP6.74□□□□□ -1.33
TRAV4-201ENST00000390426 STPG4Q8N801 248 aa6.74□□□□□ -1.33
TRAV4-201ENST00000390426 LYPD6BQ8NI32 183 aa6.74□□□□□ -1.33
TRAV4-201ENST00000390426 BORCS7Q96B45 105 aa6.74□□□□□ -1.33
TRAV4-201ENST00000390426 LINC00526Q96FQ7 95 aa6.74□□□□□ -1.33
TRAV4-201ENST00000390426 ST20Q9HBF5 79 aa6.74□□□□□ -1.33
TRAV4-201ENST00000390426 TMEM242Q9NWH2 141 aa6.74□□□□□ -1.33
TRAV4-201ENST00000390426 A0A096LNI7 61 aa6.73□□□□□ -1.33
TRAV4-201ENST00000390426 LINC00959A0A1B0GUT2 108 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms