RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 SMG6Q86US8 1419 aaKnown RBP-0.08□□□□□ -2.42
RNU6-48P-201ENST00000384161 PREX2Q70Z35 1606 aa-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 ERVK-7P63135 1459 aa-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 PLXNA2O75051 1894 aa-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 LOC107984640A0A0U1RRK4 108 aa-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 CDC42EP2O14613 210 aa-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 IFNA21P01568 189 aa-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 HBDP02042 147 aa-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 IL7P13232 177 aa-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 CKS2P33552 79 aa-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 POLR2HP52434 150 aaKnown RBP-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 KRTAP6-1Q3LI64 71 aa-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 UNQ5815/PRO19632Q6UWF5 114 aa-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 NAT14Q8WUY8 206 aa-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 HELZP42694 1942 aaKnown RBP-0.09□□□□□ -2.42
RNU6-48P-201ENST00000384161 TNS1Q9HBL0 1735 aaKnown RBP-0.1□□□□□ -2.42
RNU6-48P-201ENST00000384161 UGGT1Q9NYU2 1555 aa-0.1□□□□□ -2.42
RNU6-48P-201ENST00000384161 TRBV10-1A0A0K0K1A3 114 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 TEX49A0A1B0GTD5 131 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 M0R2T5 61 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 IGKCP01834 107 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 CCKP06307 115 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 MPC1LP0DKB6 136 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 RPL22P35268 128 aaKnown RBP-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 HRCT1Q6UXD1 115 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 TOMM20LQ6UXN7 152 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 OR4S1Q8NGB4 309 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 VPS25Q9BRG1 176 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 CBLN4Q9NTU7 201 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 COA4Q9NYJ1 87 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 ABCA3Q99758 1704 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 TEX14Q8IWB6 1497 aa-0.1□□□□□ -2.43
RNU6-48P-201ENST00000384161 IGHV1-24A0A0C4DH33 117 aa-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 UQCRQO14949 82 aa-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 APOC1P02654 83 aa-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 ADCYAP1P18509 176 aa-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 POLR2JP52435 117 aaKnown RBP-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 OR9Q1Q8NGQ5 310 aa-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 OTOSQ8NHW6 89 aa-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 PRR15LQ9BU68 103 aa-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 CPDO75976 1380 aa-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 ZNF142P52746 1687 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 ZNF831Q5JPB2 1677 aa-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 PAPPA2Q9BXP8 1791 aa-0.11□□□□□ -2.43
RNU6-48P-201ENST00000384161 ARHGAP31Q2M1Z3 1444 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 TRAV12-2A0A075B6T6 113 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 G0S2P27469 103 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 GNG10P50151 68 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 MT1HP80294 61 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 IQCJQ1A5X6 159 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 BRK1Q8WUW1 75 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 PPDPFLQ8WWR9 84 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 CENPHQ9H3R5 247 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 TRAPPC2LQ9UL33 140 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 PLEKHH2Q8IVE3 1493 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 RAPGEF2Q9Y4G8 1499 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 DNMBPQ6XZF7 1577 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 DIP2BQ9P265 1576 aa-0.12□□□□□ -2.43
RNU6-48P-201ENST00000384161 KIF21BO75037 1637 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 PBRM1Q86U86 1689 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 MBD5Q9P267 1494 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 MED23Q9ULK4 1368 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 A0A1B0GV72 72 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 F2Z2F3 143 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 OR2H2O95918 312 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 PCBD1P61457 104 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 PSPHP78330 225 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 TFAMQ00059 246 aaKnown RBP-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 KRTAP8-1Q8IUC2 63 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 CCDC115Q96NT0 180 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 BET1LQ9NYM9 111 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 V9GYQ6 96 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 MAP3K1Q13233 1512 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 KDM5DQ9BY66 1539 aa-0.13□□□□□ -2.43
RNU6-48P-201ENST00000384161 PLXNA1Q9UIW2 1896 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 CFTRP13569 1480 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 TRAV2A0A0B4J234 112 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 C9JAW5 83 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 M0QZK8 103 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 PYYP10082 97 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 HIST1H1BP16401 226 aaKnown RBP-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 PLGLB1Q02325 96 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 SAMD13Q5VXD3 122 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 FAM213BQ8TBF2 198 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 TMEM141Q96I45 108 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 METTL1Q9UBP6 276 aaKnown RBP-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 SMPXQ9UHP9 88 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 LRRC37A2A6NM11 1700 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 SOGA1O94964 1423 aa-0.14□□□□□ -2.43
RNU6-48P-201ENST00000384161 TARBP1Q13395 1621 aaKnown RBP-0.15□□□□□ -2.43
RNU6-48P-201ENST00000384161 LYNX1G3V0Z9 82 aa-0.15□□□□□ -2.43
RNU6-48P-201ENST00000384161 RPL7P18124 248 aaKnown RBP-0.15□□□□□ -2.43
RNU6-48P-201ENST00000384161 COX6A2Q02221 97 aa-0.15□□□□□ -2.43
RNU6-48P-201ENST00000384161 PPP1R2P3Q6NXS1 205 aa-0.15□□□□□ -2.43
RNU6-48P-201ENST00000384161 BPESC1Q9GZL8 116 aa-0.15□□□□□ -2.43
RNU6-48P-201ENST00000384161 TAS2R8Q9NYW2 309 aa-0.15□□□□□ -2.43
RNU6-48P-201ENST00000384161 CASZ1Q86V15 1759 aa-0.15□□□□□ -2.43
RNU6-48P-201ENST00000384161 MAGI1Q96QZ7 1491 aaPredicted RBP-0.16□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms