RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 RPL39P62891 51 aaKnown RBP6.63□□□□□ -1.35
GPNMB-202ENST00000381990 FAM159AQ6UWV7 190 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 UBE2E2Q96LR5 201 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 SONP18583 2426 aaKnown RBP6.63□□□□□ -1.35
GPNMB-202ENST00000381990 MYO9AB2RTY4 2548 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 TMEM223A0PJW6 202 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 DUX5Q96PT3 197 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 ITPR2Q14571 2701 aa6.62□□□□□ -1.35
GPNMB-202ENST00000381990 SPRY2O43597 315 aa6.62□□□□□ -1.35
GPNMB-202ENST00000381990 RPL11P62913 178 aaKnown RBP6.62□□□□□ -1.35
GPNMB-202ENST00000381990 RAX2Q96IS3 184 aa6.62□□□□□ -1.35
GPNMB-202ENST00000381990 TRBV30A0A0K0K1B3 111 aa6.62□□□□□ -1.35
GPNMB-202ENST00000381990 KRTAP1-1Q07627 177 aa6.62□□□□□ -1.35
GPNMB-202ENST00000381990 MDFICQ9P1T7 246 aa6.62□□□□□ -1.35
GPNMB-202ENST00000381990 NDUFV3P56181 108 aaKnown RBP6.61□□□□□ -1.35
GPNMB-202ENST00000381990 TRBV10-2A0A0K0K1G8 114 aa6.61□□□□□ -1.35
GPNMB-202ENST00000381990 F5H697 171 aa6.61□□□□□ -1.35
GPNMB-202ENST00000381990 M0R2P5 195 aa6.61□□□□□ -1.35
GPNMB-202ENST00000381990 LINC01620Q4KN68 170 aa6.61□□□□□ -1.35
GPNMB-202ENST00000381990 Q8N1Y9 231 aa6.61□□□□□ -1.35
GPNMB-202ENST00000381990 TRPT1Q86TN4 253 aaKnown RBP6.6□□□□□ -1.35
GPNMB-202ENST00000381990 TRAV2A0A0B4J234 112 aa6.6□□□□□ -1.35
GPNMB-202ENST00000381990 IFITM1P13164 125 aa6.6□□□□□ -1.35
GPNMB-202ENST00000381990 EDN2P20800 178 aa6.6□□□□□ -1.35
GPNMB-202ENST00000381990 MRPL23Q16540 153 aaKnown RBP6.6□□□□□ -1.35
GPNMB-202ENST00000381990 Q1RN00 199 aa6.6□□□□□ -1.35
GPNMB-202ENST00000381990 TTC32Q5I0X7 151 aa6.6□□□□□ -1.35
GPNMB-202ENST00000381990 MUSTN1Q8IVN3 82 aa6.6□□□□□ -1.35
GPNMB-202ENST00000381990 IGKV3-7A0A075B6H7 116 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 GAGE12JA6NER3 117 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 DNAJC9-AS1A6NH13 148 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 GAGE7O76087 117 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 NHLRC4P0CG21 123 aaPredicted RBP6.59□□□□□ -1.35
GPNMB-202ENST00000381990 GAGE12FP0CL80 117 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 GAGE12GP0CL81 117 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 GAGE12IP0CL82 117 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 ZNF22P17026 224 aaPredicted RBP6.59□□□□□ -1.35
GPNMB-202ENST00000381990 ID1P41134 155 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 GAGE4Q13068 117 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 NTN5Q8WTR8 489 aaPredicted RBP6.59□□□□□ -1.35
GPNMB-202ENST00000381990 ODF3Q96PU9 254 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 YAE1D1Q9NRH1 226 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 MUC4Q99102 2169 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 ACANP16112 2415 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 GCN1Q92616 2671 aaKnown RBP6.59□□□□□ -1.35
GPNMB-202ENST00000381990 A0A087WWL8 130 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 F6UB75 175 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 M0QY20 66 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 HOXD3P31249 432 aaPredicted RBP6.59□□□□□ -1.35
GPNMB-202ENST00000381990 SYNJ2BPP57105 145 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 C9orf85Q96MD7 179 aa6.59□□□□□ -1.35
GPNMB-202ENST00000381990 TRAV8-4A0A0B4J246 113 aa6.58□□□□□ -1.36
GPNMB-202ENST00000381990 FAM240AA0A1B0GVK7 77 aa6.58□□□□□ -1.36
GPNMB-202ENST00000381990 H3BMM0 161 aa6.58□□□□□ -1.36
GPNMB-202ENST00000381990 H3BT86 120 aa6.58□□□□□ -1.36
GPNMB-202ENST00000381990 EIF4EBP3O60516 100 aaPredicted RBP6.58□□□□□ -1.36
GPNMB-202ENST00000381990 C20orf203Q8NBC4 194 aa6.58□□□□□ -1.36
GPNMB-202ENST00000381990 DCANP1Q8TF63 244 aa6.58□□□□□ -1.36
GPNMB-202ENST00000381990 UBE2WQ96B02 151 aa6.58□□□□□ -1.36
GPNMB-202ENST00000381990 TRAV4A0A0B4J268 109 aa6.58□□□□□ -1.36
GPNMB-202ENST00000381990 A0A0J9YXY3 114 aa6.58□□□□□ -1.36
GPNMB-202ENST00000381990 I3L3M4 83 aa6.58□□□□□ -1.36
GPNMB-202ENST00000381990 COX6CP09669 75 aa6.58□□□□□ -1.36
GPNMB-202ENST00000381990 Q6ZSV7 163 aa6.58□□□□□ -1.36
GPNMB-202ENST00000381990 ZNF256Q9Y2P7 627 aaPredicted RBP6.58□□□□□ -1.36
GPNMB-202ENST00000381990 B5MCH6 92 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 DEFB1P60022 68 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 JPT2Q9H910 190 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 SS18L2Q9UHA2 77 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 PYGO1Q9Y3Y4 419 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 NBPF19A0A087WUL8 3843 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 H7C2G1 150 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 ZNF56Q15929 161 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 C4orf3Q8WVX3 66 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 SPANXDQ9BXN6 97 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 SPANXCQ9NY87 97 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 FASNP49327 2511 aaKnown RBP6.57□□□□□ -1.36
GPNMB-202ENST00000381990 IGHV3-16A0A0C4DH30 117 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 TEX49A0A1B0GTD5 131 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 TRIAP1O43715 76 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 FAM74A4Q5TZK3 123 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 ESM1Q9NQ30 184 aa6.57□□□□□ -1.36
GPNMB-202ENST00000381990 IGLV4-3A0A075B6K6 122 aa6.56□□□□□ -1.36
GPNMB-202ENST00000381990 TIMM21Q9BVV7 248 aa6.56□□□□□ -1.36
GPNMB-202ENST00000381990 CRLF1O75462 422 aa6.56□□□□□ -1.36
GPNMB-202ENST00000381990 IGHV3-30-3P0DP02 117 aa6.56□□□□□ -1.36
GPNMB-202ENST00000381990 MRPS36P82909 103 aaKnown RBP6.56□□□□□ -1.36
GPNMB-202ENST00000381990 C18orf65Q6ZTR6 163 aa6.56□□□□□ -1.36
GPNMB-202ENST00000381990 EDA2RQ9HAV5 297 aa6.56□□□□□ -1.36
GPNMB-202ENST00000381990 ICOSQ9Y6W8 199 aa6.56□□□□□ -1.36
GPNMB-202ENST00000381990 HECTD1Q9ULT8 2610 aa6.55□□□□□ -1.36
GPNMB-202ENST00000381990 TRAV12-3A0A0B4J271 114 aa6.55□□□□□ -1.36
GPNMB-202ENST00000381990 K7EQG2 157 aa6.55□□□□□ -1.36
GPNMB-202ENST00000381990 SLURP1P55000 103 aa6.55□□□□□ -1.36
GPNMB-202ENST00000381990 DEFB136Q30KP8 78 aa6.55□□□□□ -1.36
GPNMB-202ENST00000381990 KHDC1LQ5JSQ8 128 aa6.55□□□□□ -1.36
GPNMB-202ENST00000381990 C2orf82Q6UX34 121 aa6.55□□□□□ -1.36
GPNMB-202ENST00000381990 LITAFQ99732 161 aa6.55□□□□□ -1.36
GPNMB-202ENST00000381990 ZNF469Q96JG9 3925 aaPredicted RBP6.55□□□□□ -1.36
GPNMB-202ENST00000381990 A0A0J9YXV3 536 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms