RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 NPYP01303 97 aa13.21□□□□□ -0.29
GTF3A-201ENST00000381140 UBE2D3P61077 147 aa13.21□□□□□ -0.29
GTF3A-201ENST00000381140 UBE2D2P62837 147 aa13.21□□□□□ -0.29
GTF3A-201ENST00000381140 C6orf223Q8N319 242 aa13.21□□□□□ -0.29
GTF3A-201ENST00000381140 NRACQ8N912 160 aa13.21□□□□□ -0.29
GTF3A-201ENST00000381140 H7C1H1 209 aa13.2□□□□□ -0.3
GTF3A-201ENST00000381140 TNFRSF6BO95407 300 aa13.2□□□□□ -0.3
GTF3A-201ENST00000381140 C5orf52A6NGY3 159 aa13.2□□□□□ -0.3
GTF3A-201ENST00000381140 M0QY20 66 aa13.2□□□□□ -0.3
GTF3A-201ENST00000381140 IQCJQ1A5X6 159 aa13.2□□□□□ -0.3
GTF3A-201ENST00000381140 BAGE3Q86Y29 109 aa13.2□□□□□ -0.3
GTF3A-201ENST00000381140 TNFRSF18Q9Y5U5 241 aa13.2□□□□□ -0.3
GTF3A-201ENST00000381140 DNAH10Q8IVF4 4471 aa13.19□□□□□ -0.3
GTF3A-201ENST00000381140 TRAV9-2A0A087WT02 112 aa13.19□□□□□ -0.3
GTF3A-201ENST00000381140 PRSS47A8MTI9 375 aa13.19□□□□□ -0.3
GTF3A-201ENST00000381140 IGHV3-30P01768 117 aa13.19□□□□□ -0.3
GTF3A-201ENST00000381140 IGHV3-33P01772 117 aa13.19□□□□□ -0.3
GTF3A-201ENST00000381140 DNAH10OSP0CZ25 163 aa13.19□□□□□ -0.3
GTF3A-201ENST00000381140 IGHV3-30-3P0DP02 117 aa13.19□□□□□ -0.3
GTF3A-201ENST00000381140 IGHV3-30-5P0DP03 117 aa13.19□□□□□ -0.3
GTF3A-201ENST00000381140 LINC00310P59036 64 aa13.18□□□□□ -0.3
GTF3A-201ENST00000381140 SNRPEP62304 92 aaKnown RBP13.18□□□□□ -0.3
GTF3A-201ENST00000381140 C20orf78Q9BR46 151 aa13.18□□□□□ -0.3
GTF3A-201ENST00000381140 MAP1LC3AQ9H492 121 aa13.18□□□□□ -0.3
GTF3A-201ENST00000381140 PRSS29PA6NIE9 313 aa13.17□□□□□ -0.3
GTF3A-201ENST00000381140 ESDP10768 282 aa13.17□□□□□ -0.3
GTF3A-201ENST00000381140 LINC00336Q6ZUF6 198 aa13.17□□□□□ -0.3
GTF3A-201ENST00000381140 TRBV6-5A0A0K0K1A5 114 aa13.16□□□□□ -0.3
GTF3A-201ENST00000381140 SERF1AO75920 110 aa13.16□□□□□ -0.3
GTF3A-201ENST00000381140 RPL39LQ96EH5 51 aaKnown RBP13.16□□□□□ -0.3
GTF3A-201ENST00000381140 DNAJC30Q96LL9 226 aa13.16□□□□□ -0.3
GTF3A-201ENST00000381140 SUMO2P61956 95 aaKnown RBP13.15□□□□□ -0.3
GTF3A-201ENST00000381140 RPL32P62910 135 aaKnown RBP13.15□□□□□ -0.3
GTF3A-201ENST00000381140 LINC01556Q5JQF7 62 aa13.15□□□□□ -0.3
GTF3A-201ENST00000381140 Q8N3U1 123 aa13.15□□□□□ -0.3
GTF3A-201ENST00000381140 CHCHD1Q96BP2 118 aaKnown RBP13.15□□□□□ -0.3
GTF3A-201ENST00000381140 URB1-AS1Q96HZ7 61 aa13.15□□□□□ -0.3
GTF3A-201ENST00000381140 FRAS1Q86XX4 4008 aa13.14□□□□□ -0.31
GTF3A-201ENST00000381140 NIT1Q86X76 327 aa13.14□□□□□ -0.31
GTF3A-201ENST00000381140 NXT2Q9NPJ8 142 aaKnown RBP13.14□□□□□ -0.31
GTF3A-201ENST00000381140 NIT2Q9NQR4 276 aa13.14□□□□□ -0.31
GTF3A-201ENST00000381140 LINC00614P0C842 121 aa13.13□□□□□ -0.31
GTF3A-201ENST00000381140 DAZ4Q86SG3 579 aaKnown RBP13.13□□□□□ -0.31
GTF3A-201ENST00000381140 HIST3H2BBQ8N257 126 aa13.13□□□□□ -0.31
GTF3A-201ENST00000381140 PRSS3P2Q8NHM4 247 aa13.13□□□□□ -0.31
GTF3A-201ENST00000381140 DEFB104AQ8WTQ1 72 aa13.13□□□□□ -0.31
GTF3A-201ENST00000381140 SMIM2Q9BVW6 85 aa13.13□□□□□ -0.31
GTF3A-201ENST00000381140 DAZ3Q9NR90 486 aaKnown RBP13.13□□□□□ -0.31
GTF3A-201ENST00000381140 LOC389332A0A1B0GUA5 103 aa13.12□□□□□ -0.31
GTF3A-201ENST00000381140 LINC01546A6NGU7 62 aa13.12□□□□□ -0.31
GTF3A-201ENST00000381140 NUPR1O60356 82 aa13.12□□□□□ -0.31
GTF3A-201ENST00000381140 PMCHP20382 165 aa13.12□□□□□ -0.31
GTF3A-201ENST00000381140 IFI27P40305 119 aaPredicted RBP13.12□□□□□ -0.31
GTF3A-201ENST00000381140 RNASEKQ6P5S7 137 aaKnown RBP13.12□□□□□ -0.31
GTF3A-201ENST00000381140 FA2HQ7L5A8 372 aa13.12□□□□□ -0.31
GTF3A-201ENST00000381140 C10orf126Q8N4M7 172 aa13.12□□□□□ -0.31
GTF3A-201ENST00000381140 Q8N8P6 123 aa13.12□□□□□ -0.31
GTF3A-201ENST00000381140 ST20Q9HBF5 79 aa13.12□□□□□ -0.31
GTF3A-201ENST00000381140 TRBV6-8A0A0A6YYG3 113 aa13.11□□□□□ -0.31
GTF3A-201ENST00000381140 POLR2KP53803 58 aaKnown RBP13.1□□□□□ -0.31
GTF3A-201ENST00000381140 TNP2Q05952 138 aa13.1□□□□□ -0.31
GTF3A-201ENST00000381140 CHCHD5Q9BSY4 110 aa13.1□□□□□ -0.31
GTF3A-201ENST00000381140 TMEM70Q9BUB7 260 aa13.1□□□□□ -0.31
GTF3A-201ENST00000381140 AP5S1Q9NUS5 200 aa13.1□□□□□ -0.31
GTF3A-201ENST00000381140 DNAH2Q9P225 4427 aa13.1□□□□□ -0.31
GTF3A-201ENST00000381140 TMEM262E9PQX1 116 aa13.09□□□□□ -0.31
GTF3A-201ENST00000381140 K7EP13 123 aa13.09□□□□□ -0.31
GTF3A-201ENST00000381140 NTM-AS1Q6ZSK4 140 aa13.09□□□□□ -0.31
GTF3A-201ENST00000381140 Q9HAA7 133 aa13.09□□□□□ -0.31
GTF3A-201ENST00000381140 EPPK1P58107 5090 aaKnown RBP13.09□□□□□ -0.31
GTF3A-201ENST00000381140 TRBV27A0A0K0K1C4 114 aa13.08□□□□□ -0.31
GTF3A-201ENST00000381140 SDHAF1A6NFY7 115 aa13.08□□□□□ -0.31
GTF3A-201ENST00000381140 K7EMI3 77 aa13.08□□□□□ -0.31
GTF3A-201ENST00000381140 HSBP1O75506 76 aa13.08□□□□□ -0.31
GTF3A-201ENST00000381140 TMEM97Q5BJF2 176 aa13.08□□□□□ -0.31
GTF3A-201ENST00000381140 PACRGQ96M98 296 aaPredicted RBP13.08□□□□□ -0.31
GTF3A-201ENST00000381140 A0A087WX48 190 aa13.07□□□□□ -0.32
GTF3A-201ENST00000381140 BTF3P20290 206 aaKnown RBP13.07□□□□□ -0.32
GTF3A-201ENST00000381140 S100A2P29034 98 aa13.07□□□□□ -0.32
GTF3A-201ENST00000381140 PDZD11Q5EBL8 140 aa13.07□□□□□ -0.32
GTF3A-201ENST00000381140 TRBV25-1A0A075B6N4 114 aa13.07□□□□□ -0.32
GTF3A-201ENST00000381140 LOC105371267A0A1B0GV96 52 aa13.07□□□□□ -0.32
GTF3A-201ENST00000381140 IFITM10A6NMD0 228 aa13.07□□□□□ -0.32
GTF3A-201ENST00000381140 IBA57-AS1B1ANH7 110 aa13.07□□□□□ -0.32
GTF3A-201ENST00000381140 VCYO14598 125 aa13.07□□□□□ -0.32
GTF3A-201ENST00000381140 NFE4Q86UQ8 179 aa13.07□□□□□ -0.32
GTF3A-201ENST00000381140 DNAH17Q9UFH2 4485 aa13.06□□□□□ -0.32
GTF3A-201ENST00000381140 IGHV1-24A0A0C4DH33 117 aa13.06□□□□□ -0.32
GTF3A-201ENST00000381140 GAGE6Q13070 117 aa13.06□□□□□ -0.32
GTF3A-201ENST00000381140 Q6ZRN7 208 aaPredicted RBP13.06□□□□□ -0.32
GTF3A-201ENST00000381140 TMEM18Q96B42 140 aa13.06□□□□□ -0.32
GTF3A-201ENST00000381140 HIST1H2BLQ99880 126 aa13.06□□□□□ -0.32
GTF3A-201ENST00000381140 AMTP48728 403 aa13.05□□□□□ -0.32
GTF3A-201ENST00000381140 COTL1Q14019 142 aa13.05□□□□□ -0.32
GTF3A-201ENST00000381140 A0A1B0GVY2 172 aa13.04□□□□□ -0.32
GTF3A-201ENST00000381140 TCAPO15273 167 aa13.04□□□□□ -0.32
GTF3A-201ENST00000381140 KIR2DL4Q99706 377 aa13.04□□□□□ -0.32
GTF3A-201ENST00000381140 KLK12Q9UKR0 248 aa13.04□□□□□ -0.32
GTF3A-201ENST00000381140 I3L3M4 83 aa13.03□□□□□ -0.32
GTF3A-201ENST00000381140 LAGE3Q14657 143 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms