RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 FAM74A4Q5TZK3 123 aa12.67□□□□□ -0.38
PDX1-201ENST00000381033 KIF25-AS1Q9Y6Z4 181 aa12.67□□□□□ -0.38
PDX1-201ENST00000381033 PRSS1P07477 247 aa12.67□□□□□ -0.38
PDX1-201ENST00000381033 RPL35AP18077 110 aaKnown RBP12.67□□□□□ -0.38
PDX1-201ENST00000381033 LGALS9BQ3B8N2 356 aa12.67□□□□□ -0.38
PDX1-201ENST00000381033 LGALS9CQ6DKI2 356 aa12.67□□□□□ -0.38
PDX1-201ENST00000381033 RBMY1BA6NDE4 496 aaKnown RBP12.66□□□□□ -0.38
PDX1-201ENST00000381033 RBMY1EA6NEQ0 496 aaKnown RBP12.66□□□□□ -0.38
PDX1-201ENST00000381033 RBMY1DP0C7P1 496 aaKnown RBP12.66□□□□□ -0.38
PDX1-201ENST00000381033 SUMO2P61956 95 aaKnown RBP12.66□□□□□ -0.38
PDX1-201ENST00000381033 LAGE3Q14657 143 aa12.66□□□□□ -0.38
PDX1-201ENST00000381033 HRCT1Q6UXD1 115 aa12.66□□□□□ -0.38
PDX1-201ENST00000381033 SMIM2Q9BVW6 85 aa12.66□□□□□ -0.38
PDX1-201ENST00000381033 IGHV3-16A0A0C4DH30 117 aa12.66□□□□□ -0.38
PDX1-201ENST00000381033 FOXC2Q99958 501 aa12.65□□□□□ -0.38
PDX1-201ENST00000381033 TTTY13Q9BZ97 58 aa12.64□□□□□ -0.39
PDX1-201ENST00000381033 MED14OSP0DP75 135 aa12.64□□□□□ -0.39
PDX1-201ENST00000381033 C4orf26Q17RF5 130 aa12.64□□□□□ -0.39
PDX1-201ENST00000381033 TMEM262E9PQX1 116 aa12.63□□□□□ -0.39
PDX1-201ENST00000381033 F5H697 171 aa12.63□□□□□ -0.39
PDX1-201ENST00000381033 SNCGO76070 127 aa12.63□□□□□ -0.39
PDX1-201ENST00000381033 NXPH4O95158 308 aa12.63□□□□□ -0.39
PDX1-201ENST00000381033 NFE4Q86UQ8 179 aa12.63□□□□□ -0.39
PDX1-201ENST00000381033 FN1P02751 2386 aaKnown RBP12.63□□□□□ -0.39
PDX1-201ENST00000381033 IGHV1OR15-1A0A075B7D0 117 aa12.63□□□□□ -0.39
PDX1-201ENST00000381033 VWFP04275 2813 aa12.63□□□□□ -0.39
PDX1-201ENST00000381033 DEFB114Q30KQ6 69 aa12.62□□□□□ -0.39
PDX1-201ENST00000381033 SUMO4Q6EEV6 95 aa12.62□□□□□ -0.39
PDX1-201ENST00000381033 PCP2Q8IVA1 136 aa12.62□□□□□ -0.39
PDX1-201ENST00000381033 TMEM86BQ8N661 226 aa12.62□□□□□ -0.39
PDX1-201ENST00000381033 DYNLRB2Q8TF09 96 aa12.62□□□□□ -0.39
PDX1-201ENST00000381033 H3BMM0 161 aa12.62□□□□□ -0.39
PDX1-201ENST00000381033 ZNF561-AS1K7EIQ3 104 aa12.62□□□□□ -0.39
PDX1-201ENST00000381033 C9orf85Q96MD7 179 aa12.62□□□□□ -0.39
PDX1-201ENST00000381033 PKIGQ9Y2B9 76 aa12.62□□□□□ -0.39
PDX1-201ENST00000381033 IGKV2D-26A0A0A0MRZ7 120 aa12.61□□□□□ -0.39
PDX1-201ENST00000381033 E9PLD3 99 aa12.61□□□□□ -0.39
PDX1-201ENST00000381033 FGF6P10767 208 aa12.61□□□□□ -0.39
PDX1-201ENST00000381033 LINC01006Q8NI28 216 aa12.61□□□□□ -0.39
PDX1-201ENST00000381033 ODF3Q96PU9 254 aa12.61□□□□□ -0.39
PDX1-201ENST00000381033 PEMTQ9UBM1 199 aa12.61□□□□□ -0.39
PDX1-201ENST00000381033 HHLA3Q9XRX5 114 aa12.61□□□□□ -0.39
PDX1-201ENST00000381033 NDUFA7O95182 113 aa12.61□□□□□ -0.39
PDX1-201ENST00000381033 NMUP48645 174 aa12.61□□□□□ -0.39
PDX1-201ENST00000381033 MAP6D1Q9H9H5 199 aa12.61□□□□□ -0.39
PDX1-201ENST00000381033 MRPL35Q9NZE8 188 aaKnown RBP12.6□□□□□ -0.39
PDX1-201ENST00000381033 DUSP14O95147 198 aaKnown RBP12.6□□□□□ -0.39
PDX1-201ENST00000381033 HERVK_113P63121 156 aa12.6□□□□□ -0.39
PDX1-201ENST00000381033 TRAV4A0A0B4J268 109 aa12.59□□□□□ -0.39
PDX1-201ENST00000381033 ATP5LO75964 103 aa12.59□□□□□ -0.39
PDX1-201ENST00000381033 HLA-DRB4P13762 266 aa12.59□□□□□ -0.39
PDX1-201ENST00000381033 C6orf226Q5I0X4 101 aa12.59□□□□□ -0.39
PDX1-201ENST00000381033 HLA-DRB4X5D2U9 266 aa12.59□□□□□ -0.39
PDX1-201ENST00000381033 IGHV3-73A0A0B4J1V6 119 aa12.59□□□□□ -0.39
PDX1-201ENST00000381033 ZNF876PQ49A33 203 aa12.59□□□□□ -0.39
PDX1-201ENST00000381033 PPDPFLQ8WWR9 84 aa12.59□□□□□ -0.39
PDX1-201ENST00000381033 SPANXCQ9NY87 97 aa12.59□□□□□ -0.39
PDX1-201ENST00000381033 ZNF256Q9Y2P7 627 aaPredicted RBP12.59□□□□□ -0.39
PDX1-201ENST00000381033 CCL24O00175 119 aa12.58□□□□□ -0.4
PDX1-201ENST00000381033 CRLF1O75462 422 aa12.58□□□□□ -0.4
PDX1-201ENST00000381033 GTSCR1Q86UQ5 136 aa12.58□□□□□ -0.4
PDX1-201ENST00000381033 NACAE9PAV3 2078 aa12.58□□□□□ -0.4
PDX1-201ENST00000381033 PROK1P58294 105 aa12.57□□□□□ -0.4
PDX1-201ENST00000381033 ZC2HC1BQ5TFG8 222 aa12.57□□□□□ -0.4
PDX1-201ENST00000381033 MORN3Q6PF18 240 aaPredicted RBP12.57□□□□□ -0.4
PDX1-201ENST00000381033 POM121L12Q8N7R1 296 aa12.57□□□□□ -0.4
PDX1-201ENST00000381033 ZMAT4Q9H898 229 aa12.57□□□□□ -0.4
PDX1-201ENST00000381033 ZNF56Q15929 161 aa12.57□□□□□ -0.4
PDX1-201ENST00000381033 TENM1Q9UKZ4 2725 aa12.57□□□□□ -0.4
PDX1-201ENST00000381033 C2orf66Q6UXQ4 117 aa12.56□□□□□ -0.4
PDX1-201ENST00000381033 Q9UF83 564 aa12.56□□□□□ -0.4
PDX1-201ENST00000381033 IGKCP01834 107 aa12.56□□□□□ -0.4
PDX1-201ENST00000381033 RPL39P62891 51 aaKnown RBP12.56□□□□□ -0.4
PDX1-201ENST00000381033 ODF3L2Q3SX64 289 aa12.56□□□□□ -0.4
PDX1-201ENST00000381033 TRPT1Q86TN4 253 aaKnown RBP12.56□□□□□ -0.4
PDX1-201ENST00000381033 PHLDA1Q8WV24 401 aaPredicted RBP12.56□□□□□ -0.4
PDX1-201ENST00000381033 SCGB3A1Q96QR1 104 aa12.56□□□□□ -0.4
PDX1-201ENST00000381033 SDHAF1A6NFY7 115 aa12.55□□□□□ -0.4
PDX1-201ENST00000381033 P0DMU3 169 aa12.55□□□□□ -0.4
PDX1-201ENST00000381033 FAM231AP0DMU4 169 aa12.55□□□□□ -0.4
PDX1-201ENST00000381033 FAM231CP0DMU5 169 aa12.55□□□□□ -0.4
PDX1-201ENST00000381033 TOMM6Q96B49 74 aa12.55□□□□□ -0.4
PDX1-201ENST00000381033 C2CD3Q4AC94 2353 aa12.55□□□□□ -0.4
PDX1-201ENST00000381033 POLR2KP53803 58 aaKnown RBP12.54□□□□□ -0.4
PDX1-201ENST00000381033 Q5XG85 94 aa12.54□□□□□ -0.4
PDX1-201ENST00000381033 CARD19Q96LW7 228 aa12.54□□□□□ -0.4
PDX1-201ENST00000381033 HIVEP1P15822 2718 aa12.54□□□□□ -0.4
PDX1-201ENST00000381033 NSD1Q96L73 2696 aaPredicted RBP12.54□□□□□ -0.4
PDX1-201ENST00000381033 ORMDL2Q53FV1 153 aa12.54□□□□□ -0.4
PDX1-201ENST00000381033 C9orf153Q5TBE3 101 aa12.54□□□□□ -0.4
PDX1-201ENST00000381033 XCL2Q9UBD3 114 aa12.54□□□□□ -0.4
PDX1-201ENST00000381033 IGLL5B9A064 214 aa12.53□□□□□ -0.4
PDX1-201ENST00000381033 M0QY20 66 aa12.53□□□□□ -0.4
PDX1-201ENST00000381033 DPM2O94777 84 aa12.53□□□□□ -0.4
PDX1-201ENST00000381033 RNASE1P07998 156 aaKnown RBP12.53□□□□□ -0.4
PDX1-201ENST00000381033 C10orf126Q8N4M7 172 aa12.53□□□□□ -0.4
PDX1-201ENST00000381033 WFDC10AQ9H1F0 79 aa12.52□□□□□ -0.4
PDX1-201ENST00000381033 IGHV3OR16-12A0A075B7B8 117 aa12.52□□□□□ -0.41
PDX1-201ENST00000381033 FAM236AA0A1B0GUQ0 79 aa12.52□□□□□ -0.41
PDX1-201ENST00000381033 FAM236BA0A1B0GV22 79 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms