RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 NXPH4O95158 308 aa6.97□□□□□ -1.29
PTPRA-204ENST00000380393 NDPQ00604 133 aa6.97□□□□□ -1.29
PTPRA-204ENST00000380393 ASH1LQ9NR48 2969 aaKnown RBP6.97□□□□□ -1.29
PTPRA-204ENST00000380393 IGHV1-18A0A0C4DH31 117 aa6.97□□□□□ -1.29
PTPRA-204ENST00000380393 COX8CQ7Z4L0 72 aa6.97□□□□□ -1.29
PTPRA-204ENST00000380393 TMEM61Q8N0U2 210 aa6.97□□□□□ -1.29
PTPRA-204ENST00000380393 LINC00846Q9NV44 126 aa6.97□□□□□ -1.29
PTPRA-204ENST00000380393 RNF7Q9UBF6 113 aa6.97□□□□□ -1.29
PTPRA-204ENST00000380393 RAI1Q7Z5J4 1906 aaPredicted RBP6.97□□□□□ -1.29
PTPRA-204ENST00000380393 MYO18BQ8IUG5 2567 aa6.96□□□□□ -1.29
PTPRA-204ENST00000380393 SAA4P35542 130 aa6.96□□□□□ -1.29
PTPRA-204ENST00000380393 SOSTDC1Q6X4U4 206 aa6.96□□□□□ -1.29
PTPRA-204ENST00000380393 MALRD1Q5VYJ5 2156 aa6.96□□□□□ -1.29
PTPRA-204ENST00000380393 RPL27AP46776 148 aaKnown RBP6.96□□□□□ -1.3
PTPRA-204ENST00000380393 DCHS2Q6V1P9 2916 aa6.96□□□□□ -1.3
PTPRA-204ENST00000380393 AKAP6Q13023 2319 aa6.96□□□□□ -1.3
PTPRA-204ENST00000380393 H3BRN7 92 aa6.96□□□□□ -1.3
PTPRA-204ENST00000380393 Q8NA96 180 aa6.96□□□□□ -1.3
PTPRA-204ENST00000380393 CRYBG3Q68DQ2 2970 aa6.96□□□□□ -1.3
PTPRA-204ENST00000380393 IGHV3-35A0A0C4DH35 117 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 COX7A2LO14548 114 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 IGKV3-15P01624 115 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 CGB3P0DN86 165 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 CGB7P0DN87 165 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 TMEM167AQ8TBQ9 72 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 CENPEQ02224 2701 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 F8WEM9 126 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 RPL28P46779 137 aaKnown RBP6.95□□□□□ -1.3
PTPRA-204ENST00000380393 RPL39P62891 51 aaKnown RBP6.95□□□□□ -1.3
PTPRA-204ENST00000380393 VSIG2Q96IQ7 327 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 BPESC1Q9GZL8 116 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 MED13LQ71F56 2210 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 MGPP08493 103 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 ADORA2A-AS1P86434 159 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 ZNF876PQ49A33 203 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 ZNF580Q9UK33 172 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 SNURFQ9Y675 71 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 CHD6Q8TD26 2715 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 TACC2O95359 2948 aa6.95□□□□□ -1.3
PTPRA-204ENST00000380393 ABCA4P78363 2273 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 IGKV3D-20A0A0C4DH25 116 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 A0A0J9YX75 114 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 C9orf106Q8NAJ2 232 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 GAFA1Q96PS6 74 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 HIVEP3Q5T1R4 2406 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 IGHV1-69DA0A0B4J2H0 117 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 IGIPA6NJ69 53 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 A8MZ25 164 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 TRBV12-3P01733 135 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 PRR15Q8IV56 129 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 WFDC9Q8NEX5 89 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 C14orf132Q9NPU4 83 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 PDE6HQ13956 83 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 Q6ZRU5 148 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 C1orf158Q8N1D5 194 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 ZNF462Q96JM2 2506 aa6.94□□□□□ -1.3
PTPRA-204ENST00000380393 LHBP01229 141 aa6.93□□□□□ -1.3
PTPRA-204ENST00000380393 CCL17Q92583 94 aa6.93□□□□□ -1.3
PTPRA-204ENST00000380393 TMEM141Q96I45 108 aa6.93□□□□□ -1.3
PTPRA-204ENST00000380393 LITAFQ99732 161 aa6.93□□□□□ -1.3
PTPRA-204ENST00000380393 SVEP1Q4LDE5 3571 aa6.93□□□□□ -1.3
PTPRA-204ENST00000380393 IGHV3-23P01764 117 aa6.93□□□□□ -1.3
PTPRA-204ENST00000380393 MIAQ16674 131 aa6.93□□□□□ -1.3
PTPRA-204ENST00000380393 FAM222AQ5U5X8 452 aa6.93□□□□□ -1.3
PTPRA-204ENST00000380393 IGFL3Q6UXB1 125 aa6.93□□□□□ -1.3
PTPRA-204ENST00000380393 RMI2Q96E14 147 aa6.93□□□□□ -1.3
PTPRA-204ENST00000380393 C22orf24Q9Y442 160 aa6.93□□□□□ -1.3
PTPRA-204ENST00000380393 SEM1Q6ZVN7 128 aa6.92□□□□□ -1.3
PTPRA-204ENST00000380393 PSMG3-AS1Q96PY0 264 aa6.92□□□□□ -1.3
PTPRA-204ENST00000380393 C11orf21Q9P2W6 132 aa6.92□□□□□ -1.3
PTPRA-204ENST00000380393 PLAC8L1A1L4L8 177 aa6.92□□□□□ -1.3
PTPRA-204ENST00000380393 M0R381 172 aa6.92□□□□□ -1.3
PTPRA-204ENST00000380393 ZNF833PQ6ZTB9 187 aa6.92□□□□□ -1.3
PTPRA-204ENST00000380393 IGHV7-4-1A0A0J9YVY3 117 aa6.91□□□□□ -1.3
PTPRA-204ENST00000380393 IGKV1-17P01599 117 aa6.91□□□□□ -1.3
PTPRA-204ENST00000380393 Q9HAA7 133 aa6.91□□□□□ -1.3
PTPRA-204ENST00000380393 COX7A1P24310 79 aa6.91□□□□□ -1.3
PTPRA-204ENST00000380393 DAD1P61803 113 aa6.91□□□□□ -1.3
PTPRA-204ENST00000380393 TIMM17AQ99595 171 aa6.91□□□□□ -1.3
PTPRA-204ENST00000380393 CSMD2Q7Z408 3487 aa6.91□□□□□ -1.3
PTPRA-204ENST00000380393 IGHV3-30-3P0DP02 117 aa6.9□□□□□ -1.3
PTPRA-204ENST00000380393 FAM215AQ9Y5M1 114 aa6.9□□□□□ -1.3
PTPRA-204ENST00000380393 USP9XQ93008 2570 aaPredicted RBP6.9□□□□□ -1.3
PTPRA-204ENST00000380393 IGHV3OR16-13A0A075B7E8 117 aa6.9□□□□□ -1.3
PTPRA-204ENST00000380393 IGHV3-74A0A0B4J1X5 117 aa6.9□□□□□ -1.3
PTPRA-204ENST00000380393 IGHV1-46P01743 117 aa6.9□□□□□ -1.3
PTPRA-204ENST00000380393 BEAN1Q3B7T3 259 aa6.9□□□□□ -1.3
PTPRA-204ENST00000380393 Q8N2B8 174 aa6.9□□□□□ -1.3
PTPRA-204ENST00000380393 IGLV2-23P01705 113 aa6.9□□□□□ -1.31
PTPRA-204ENST00000380393 CFHR3Q02985 330 aa6.9□□□□□ -1.31
PTPRA-204ENST00000380393 KLKP1Q107X0 134 aa6.9□□□□□ -1.31
PTPRA-204ENST00000380393 OPRPNQ99935 248 aaPredicted RBP6.9□□□□□ -1.31
PTPRA-204ENST00000380393 NDUFA12Q9UI09 145 aa6.9□□□□□ -1.31
PTPRA-204ENST00000380393 FAM208BQ5VWN6 2430 aa6.9□□□□□ -1.31
PTPRA-204ENST00000380393 CSMD1Q96PZ7 3565 aa6.89□□□□□ -1.31
PTPRA-204ENST00000380393 RNF223E7ERA6 249 aa6.89□□□□□ -1.31
PTPRA-204ENST00000380393 FAM229BQ4G0N7 80 aa6.89□□□□□ -1.31
PTPRA-204ENST00000380393 TRAV7A0A075B6U4 112 aa6.89□□□□□ -1.31
PTPRA-204ENST00000380393 TRBV27A0A0K0K1C4 114 aa6.89□□□□□ -1.31
PTPRA-204ENST00000380393 LAMTOR3Q9UHA4 124 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms