RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 IGLL1P15814 213 aa8.68□□□□□ -1.02
PTCHD1-201ENST00000379361 TRBV6-1A0A0K0K1D8 114 aa8.67□□□□□ -1.02
PTCHD1-201ENST00000379361 IGKV2D-26A0A0A0MRZ7 120 aa8.67□□□□□ -1.02
PTCHD1-201ENST00000379361 TCL1BO95988 128 aa8.67□□□□□ -1.02
PTCHD1-201ENST00000379361 ZNF491Q8N8L2 437 aa8.67□□□□□ -1.02
PTCHD1-201ENST00000379361 DAND5Q8N907 189 aa8.67□□□□□ -1.02
PTCHD1-201ENST00000379361 DEFB131BA0A096LNP1 70 aa8.67□□□□□ -1.02
PTCHD1-201ENST00000379361 C16orf54Q6UWD8 224 aa8.67□□□□□ -1.02
PTCHD1-201ENST00000379361 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.67□□□□□ -1.02
PTCHD1-201ENST00000379361 TOMM6Q96B49 74 aa8.67□□□□□ -1.02
PTCHD1-201ENST00000379361 H3BT86 120 aa8.66□□□□□ -1.02
PTCHD1-201ENST00000379361 A0A0G2JRQ6 117 aa8.66□□□□□ -1.02
PTCHD1-201ENST00000379361 TEX49A0A1B0GTD5 131 aa8.66□□□□□ -1.02
PTCHD1-201ENST00000379361 H7C423 109 aa8.66□□□□□ -1.02
PTCHD1-201ENST00000379361 MIR7-3HGQ8N6C7 128 aa8.66□□□□□ -1.02
PTCHD1-201ENST00000379361 NDUFC1O43677 76 aa8.66□□□□□ -1.02
PTCHD1-201ENST00000379361 IGKV1D-37A0A075B6S9 117 aa8.65□□□□□ -1.02
PTCHD1-201ENST00000379361 SPATA12Q7Z6I5 190 aa8.65□□□□□ -1.02
PTCHD1-201ENST00000379361 Q8N9L7 120 aa8.65□□□□□ -1.02
PTCHD1-201ENST00000379361 DNAJC9-AS1A6NH13 148 aa8.65□□□□□ -1.02
PTCHD1-201ENST00000379361 TEN1Q86WV5 123 aa8.65□□□□□ -1.02
PTCHD1-201ENST00000379361 NDUFC2-KCTD14E9PQ53 114 aa8.65□□□□□ -1.02
PTCHD1-201ENST00000379361 UBE2D2P62837 147 aa8.65□□□□□ -1.02
PTCHD1-201ENST00000379361 AGPAT4-IT1Q9H0P7 198 aa8.65□□□□□ -1.03
PTCHD1-201ENST00000379361 WFDC11Q8NEX6 87 aa8.65□□□□□ -1.03
PTCHD1-201ENST00000379361 MPLKIPQ8TAP9 179 aa8.65□□□□□ -1.03
PTCHD1-201ENST00000379361 ZNF747Q9BV97 191 aa8.64□□□□□ -1.03
PTCHD1-201ENST00000379361 FAM240AA0A1B0GVK7 77 aa8.64□□□□□ -1.03
PTCHD1-201ENST00000379361 AJUBAQ96IF1 538 aa8.64□□□□□ -1.03
PTCHD1-201ENST00000379361 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
PTCHD1-201ENST00000379361 TMEM89A2RUT3 159 aa8.64□□□□□ -1.03
PTCHD1-201ENST00000379361 THSD7BQ9C0I4 1608 aa8.64□□□□□ -1.03
PTCHD1-201ENST00000379361 ASPHD1Q5U4P2 390 aa8.64□□□□□ -1.03
PTCHD1-201ENST00000379361 C10orf105Q8TEF2 133 aa8.64□□□□□ -1.03
PTCHD1-201ENST00000379361 FAM215AQ9Y5M1 114 aa8.64□□□□□ -1.03
PTCHD1-201ENST00000379361 WIPF3A6NGB9 483 aa8.64□□□□□ -1.03
PTCHD1-201ENST00000379361 TRAV10A0A0B4J240 114 aa8.63□□□□□ -1.03
PTCHD1-201ENST00000379361 LINC00322Q6ZN03 302 aaPredicted RBP8.63□□□□□ -1.03
PTCHD1-201ENST00000379361 IGHV4-61A0A0C4DH41 118 aa8.63□□□□□ -1.03
PTCHD1-201ENST00000379361 ZFAND2AQ8N6M9 145 aa8.63□□□□□ -1.03
PTCHD1-201ENST00000379361 K7EIM0 57 aa8.63□□□□□ -1.03
PTCHD1-201ENST00000379361 ZFP36P26651 326 aaKnown RBP8.63□□□□□ -1.03
PTCHD1-201ENST00000379361 ZNF581Q9P0T4 197 aa8.63□□□□□ -1.03
PTCHD1-201ENST00000379361 REG3AQ06141 175 aa8.63□□□□□ -1.03
PTCHD1-201ENST00000379361 MIAQ16674 131 aa8.63□□□□□ -1.03
PTCHD1-201ENST00000379361 SERP2Q8N6R1 65 aa8.63□□□□□ -1.03
PTCHD1-201ENST00000379361 LTBP2Q14767 1821 aa8.63□□□□□ -1.03
PTCHD1-201ENST00000379361 LYPD6BQ8NI32 183 aa8.63□□□□□ -1.03
PTCHD1-201ENST00000379361 COL27A1Q8IZC6 1860 aaPredicted RBP8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 ARTNQ5T4W7 220 aa8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 Q6ZUT4 128 aa8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 Q6ZVQ6 151 aa8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 LINC00269Q8N2A0 174 aa8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 FAM236DA0A1B0GTK5 79 aa8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 FAM236CP0DP71 79 aa8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 SHISA2Q6UWI4 295 aa8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 CTSZQ9UBR2 303 aa8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 NBEAL1Q6ZS30 2694 aa8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 LY6G6EA0A0G2JKS1 128 aa8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 A6NED7 52 aa8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 Q6ZR03 302 aa8.62□□□□□ -1.03
PTCHD1-201ENST00000379361 DAZAP2Q15038 168 aaPredicted RBP8.61□□□□□ -1.03
PTCHD1-201ENST00000379361 DHRS4-AS1Q9P1J3 65 aa8.61□□□□□ -1.03
PTCHD1-201ENST00000379361 LY6G6CO95867 125 aa8.61□□□□□ -1.03
PTCHD1-201ENST00000379361 HIST2H2BDQ6DRA6 164 aa8.61□□□□□ -1.03
PTCHD1-201ENST00000379361 CLEC2BQ92478 149 aa8.61□□□□□ -1.03
PTCHD1-201ENST00000379361 PLA2G2CQ5R387 149 aa8.61□□□□□ -1.03
PTCHD1-201ENST00000379361 IGLV11-55A0A075B6I3 123 aa8.61□□□□□ -1.03
PTCHD1-201ENST00000379361 RNF185Q96GF1 192 aa8.6□□□□□ -1.03
PTCHD1-201ENST00000379361 P0DMU3 169 aa8.6□□□□□ -1.03
PTCHD1-201ENST00000379361 FAM231AP0DMU4 169 aa8.6□□□□□ -1.03
PTCHD1-201ENST00000379361 FAM231CP0DMU5 169 aa8.6□□□□□ -1.03
PTCHD1-201ENST00000379361 IGF2-ASQ6U949 168 aa8.6□□□□□ -1.03
PTCHD1-201ENST00000379361 ODF3Q96PU9 254 aa8.6□□□□□ -1.03
PTCHD1-201ENST00000379361 SPINK6Q6UWN8 80 aa8.6□□□□□ -1.03
PTCHD1-201ENST00000379361 TRAV23DV6A0A075B6W5 121 aa8.6□□□□□ -1.03
PTCHD1-201ENST00000379361 A0A096LNI7 61 aa8.6□□□□□ -1.03
PTCHD1-201ENST00000379361 RPL39P62891 51 aaKnown RBP8.6□□□□□ -1.03
PTCHD1-201ENST00000379361 CTRLP40313 264 aa8.6□□□□□ -1.03
PTCHD1-201ENST00000379361 MDFICQ9P1T7 246 aa8.6□□□□□ -1.03
PTCHD1-201ENST00000379361 FAM222AQ5U5X8 452 aa8.59□□□□□ -1.03
PTCHD1-201ENST00000379361 PIP4P1Q86T03 277 aa8.59□□□□□ -1.03
PTCHD1-201ENST00000379361 A0A0J9YXV3 536 aa8.59□□□□□ -1.03
PTCHD1-201ENST00000379361 FAM19A5Q7Z5A7 132 aaPredicted RBP8.59□□□□□ -1.03
PTCHD1-201ENST00000379361 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.59□□□□□ -1.04
PTCHD1-201ENST00000379361 I3L2K1 104 aa8.59□□□□□ -1.04
PTCHD1-201ENST00000379361 FSHBP01225 129 aa8.58□□□□□ -1.04
PTCHD1-201ENST00000379361 PIK3CD-AS1Q5SR53 167 aa8.58□□□□□ -1.04
PTCHD1-201ENST00000379361 MIFP14174 115 aa8.58□□□□□ -1.04
PTCHD1-201ENST00000379361 K7EN84 100 aa8.58□□□□□ -1.04
PTCHD1-201ENST00000379361 ADCYAP1P18509 176 aa8.58□□□□□ -1.04
PTCHD1-201ENST00000379361 BLCAPP62952 87 aa8.58□□□□□ -1.04
PTCHD1-201ENST00000379361 HIGD1BQ9P298 99 aa8.58□□□□□ -1.04
PTCHD1-201ENST00000379361 GRNP28799 593 aaKnown RBP8.58□□□□□ -1.04
PTCHD1-201ENST00000379361 HRCT1Q6UXD1 115 aa8.57□□□□□ -1.04
PTCHD1-201ENST00000379361 LINC00643Q86TS7 51 aa8.57□□□□□ -1.04
PTCHD1-201ENST00000379361 ZNF726P1Q15940 193 aa8.56□□□□□ -1.04
PTCHD1-201ENST00000379361 DIAPH2-AS1Q14236 149 aa8.56□□□□□ -1.04
PTCHD1-201ENST00000379361 MAP6D1Q9H9H5 199 aa8.56□□□□□ -1.04
PTCHD1-201ENST00000379361 SIRPDQ9H106 197 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms