RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 ATP5EP2Q5VTU8 51 aa11.1□□□□□ -0.63
PRDM16-203ENST00000378391 PIFOQ8TCI5 191 aa11.1□□□□□ -0.63
PRDM16-203ENST00000378391 ZFHX2Q9C0A1 2572 aaPredicted RBP11.09□□□□□ -0.63
PRDM16-203ENST00000378391 KIAA1549Q9HCM3 1950 aa11.09□□□□□ -0.63
PRDM16-203ENST00000378391 H3BQ85 93 aa11.09□□□□□ -0.63
PRDM16-203ENST00000378391 PRORYQ9H606 182 aa11.09□□□□□ -0.63
PRDM16-203ENST00000378391 TRBV27A0A0K0K1C4 114 aa11.09□□□□□ -0.63
PRDM16-203ENST00000378391 CCL24O00175 119 aa11.09□□□□□ -0.63
PRDM16-203ENST00000378391 COX7B2Q8TF08 81 aa11.09□□□□□ -0.63
PRDM16-203ENST00000378391 IGHV4-61A0A0C4DH41 118 aa11.09□□□□□ -0.63
PRDM16-203ENST00000378391 USP17L23D6RBM5 183 aa11.09□□□□□ -0.63
PRDM16-203ENST00000378391 K7EQD1 137 aa11.09□□□□□ -0.63
PRDM16-203ENST00000378391 CASC2Q6XLA1 102 aa11.08□□□□□ -0.64
PRDM16-203ENST00000378391 CLEC2BQ92478 149 aa11.08□□□□□ -0.64
PRDM16-203ENST00000378391 COX7A2LO14548 114 aa11.08□□□□□ -0.64
PRDM16-203ENST00000378391 DEFB105AQ8NG35 78 aa11.08□□□□□ -0.64
PRDM16-203ENST00000378391 C5orf42Q9H799 3197 aa11.08□□□□□ -0.64
PRDM16-203ENST00000378391 SEM1Q6ZVN7 128 aa11.08□□□□□ -0.64
PRDM16-203ENST00000378391 HIGD2BQ4VC39 106 aa11.07□□□□□ -0.64
PRDM16-203ENST00000378391 LINC00574Q9H8X3 128 aa11.07□□□□□ -0.64
PRDM16-203ENST00000378391 WNK1Q9H4A3 2382 aa11.07□□□□□ -0.64
PRDM16-203ENST00000378391 TEX49A0A1B0GTD5 131 aa11.07□□□□□ -0.64
PRDM16-203ENST00000378391 TCL1BO95988 128 aa11.07□□□□□ -0.64
PRDM16-203ENST00000378391 APRG1Q8IVJ8 170 aa11.07□□□□□ -0.64
PRDM16-203ENST00000378391 C16orf74Q96GX8 76 aa11.07□□□□□ -0.64
PRDM16-203ENST00000378391 OPRPNQ99935 248 aaPredicted RBP11.07□□□□□ -0.64
PRDM16-203ENST00000378391 IGHV4-38-2P0DP08 117 aa11.07□□□□□ -0.64
PRDM16-203ENST00000378391 DEFB136Q30KP8 78 aa11.07□□□□□ -0.64
PRDM16-203ENST00000378391 GPHB5Q86YW7 130 aa11.07□□□□□ -0.64
PRDM16-203ENST00000378391 LOC107984640A0A0U1RRK4 108 aa11.06□□□□□ -0.64
PRDM16-203ENST00000378391 SLURP1P55000 103 aa11.06□□□□□ -0.64
PRDM16-203ENST00000378391 C20orf203Q8NBC4 194 aa11.06□□□□□ -0.64
PRDM16-203ENST00000378391 TRBV7-3A0A075B6L6 115 aa11.06□□□□□ -0.64
PRDM16-203ENST00000378391 MYCNOSP40205 109 aa11.06□□□□□ -0.64
PRDM16-203ENST00000378391 PRR14LQ5THK1 2151 aa11.05□□□□□ -0.64
PRDM16-203ENST00000378391 XGP55808 180 aa11.05□□□□□ -0.64
PRDM16-203ENST00000378391 ENHOQ6UWT2 76 aa11.05□□□□□ -0.64
PRDM16-203ENST00000378391 A0A0J9YY99 117 aa11.05□□□□□ -0.64
PRDM16-203ENST00000378391 IGHV1-58A0A0C4DH39 117 aa11.04□□□□□ -0.64
PRDM16-203ENST00000378391 PDE6GP18545 87 aa11.04□□□□□ -0.64
PRDM16-203ENST00000378391 URB1-AS1Q96HZ7 61 aa11.04□□□□□ -0.64
PRDM16-203ENST00000378391 Q6ZQT7 251 aa11.04□□□□□ -0.64
PRDM16-203ENST00000378391 NDUFA11Q86Y39 141 aa11.04□□□□□ -0.64
PRDM16-203ENST00000378391 TMEM89A2RUT3 159 aa11.04□□□□□ -0.64
PRDM16-203ENST00000378391 LECT2O14960 151 aa11.03□□□□□ -0.64
PRDM16-203ENST00000378391 GYPEP15421 78 aa11.03□□□□□ -0.64
PRDM16-203ENST00000378391 DAND5Q8N907 189 aa11.03□□□□□ -0.64
PRDM16-203ENST00000378391 IGKV4-1P06312 121 aa11.03□□□□□ -0.64
PRDM16-203ENST00000378391 C2orf91Q6ZV80 131 aa11.02□□□□□ -0.65
PRDM16-203ENST00000378391 IGHV4OR15-8A0A075B7B6 117 aa11.02□□□□□ -0.65
PRDM16-203ENST00000378391 IGHV4-30-2A0A087WSY4 118 aa11.02□□□□□ -0.65
PRDM16-203ENST00000378391 A0A087WW49 117 aa11.02□□□□□ -0.65
PRDM16-203ENST00000378391 TNRC6BQ9UPQ9 1833 aaKnown RBP11.02□□□□□ -0.65
PRDM16-203ENST00000378391 BPY2O14599 106 aa11.02□□□□□ -0.65
PRDM16-203ENST00000378391 ZNF80P51504 273 aaPredicted RBP11.02□□□□□ -0.65
PRDM16-203ENST00000378391 IGHV3-30-3P0DP02 117 aa11.01□□□□□ -0.65
PRDM16-203ENST00000378391 LINC00526Q96FQ7 95 aa11.01□□□□□ -0.65
PRDM16-203ENST00000378391 IGKV2D-24A0A075B6R9 120 aa11.01□□□□□ -0.65
PRDM16-203ENST00000378391 ZFP36P26651 326 aaKnown RBP11.01□□□□□ -0.65
PRDM16-203ENST00000378391 Q6Q795 121 aa11.01□□□□□ -0.65
PRDM16-203ENST00000378391 TMEM256-PLSCR3K7ERE1 68 aa11□□□□□ -0.65
PRDM16-203ENST00000378391 TM2D2Q9BX73 214 aa11□□□□□ -0.65
PRDM16-203ENST00000378391 MUC6Q6W4X9 2439 aa11□□□□□ -0.65
PRDM16-203ENST00000378391 A0A0J9YX75 114 aa11□□□□□ -0.65
PRDM16-203ENST00000378391 P0DMU3 169 aa11□□□□□ -0.65
PRDM16-203ENST00000378391 FAM231AP0DMU4 169 aa11□□□□□ -0.65
PRDM16-203ENST00000378391 FAM231CP0DMU5 169 aa11□□□□□ -0.65
PRDM16-203ENST00000378391 CAMK2N2Q96S95 79 aa11□□□□□ -0.65
PRDM16-203ENST00000378391 NOTCH2Q04721 2471 aa11□□□□□ -0.65
PRDM16-203ENST00000378391 CSPG4Q6UVK1 2322 aa10.99□□□□□ -0.65
PRDM16-203ENST00000378391 FAM19A3Q7Z5A8 133 aa10.99□□□□□ -0.65
PRDM16-203ENST00000378391 MDFICQ9P1T7 246 aa10.99□□□□□ -0.65
PRDM16-203ENST00000378391 CACNA1AO00555 2505 aa10.99□□□□□ -0.65
PRDM16-203ENST00000378391 IGKV2D-26A0A0A0MRZ7 120 aa10.99□□□□□ -0.65
PRDM16-203ENST00000378391 DEFB1P60022 68 aa10.99□□□□□ -0.65
PRDM16-203ENST00000378391 FBXL19-AS1Q494R0 122 aa10.99□□□□□ -0.65
PRDM16-203ENST00000378391 UNQ9165/PRO28630Q6UXU0 137 aa10.99□□□□□ -0.65
PRDM16-203ENST00000378391 ETDCA0A1B0GVM5 59 aa10.98□□□□□ -0.65
PRDM16-203ENST00000378391 LRCOL1A6NCL2 159 aa10.98□□□□□ -0.65
PRDM16-203ENST00000378391 PSPHP1O15172 72 aa10.98□□□□□ -0.65
PRDM16-203ENST00000378391 PLA2G2AP14555 144 aa10.98□□□□□ -0.65
PRDM16-203ENST00000378391 IGHV4-4A0A075B6R2 117 aa10.98□□□□□ -0.65
PRDM16-203ENST00000378391 TRBV10-1A0A0K0K1A3 114 aa10.98□□□□□ -0.65
PRDM16-203ENST00000378391 IGLV10-54A0A075B6I4 117 aa10.98□□□□□ -0.65
PRDM16-203ENST00000378391 PLXNB1O43157 2135 aa10.97□□□□□ -0.65
PRDM16-203ENST00000378391 SPART-AS1P0CW21 52 aa10.97□□□□□ -0.65
PRDM16-203ENST00000378391 ADAMTS20P59510 1910 aa10.97□□□□□ -0.65
PRDM16-203ENST00000378391 IGLV2-11P01706 119 aa10.97□□□□□ -0.65
PRDM16-203ENST00000378391 MIAQ16674 131 aa10.97□□□□□ -0.65
PRDM16-203ENST00000378391 ADORA2A-AS1P86434 159 aa10.97□□□□□ -0.65
PRDM16-203ENST00000378391 MIR7-3HGQ8N6C7 128 aa10.97□□□□□ -0.65
PRDM16-203ENST00000378391 CHD7Q9P2D1 2997 aa10.97□□□□□ -0.65
PRDM16-203ENST00000378391 CRIP1P50238 77 aa10.96□□□□□ -0.66
PRDM16-203ENST00000378391 C9orf66Q5T8R8 295 aa10.95□□□□□ -0.66
PRDM16-203ENST00000378391 CCDC140Q96MF4 163 aa10.95□□□□□ -0.66
PRDM16-203ENST00000378391 Q9HAA7 133 aa10.95□□□□□ -0.66
PRDM16-203ENST00000378391 HHLA3Q9XRX5 114 aa10.95□□□□□ -0.66
PRDM16-203ENST00000378391 DEFB113Q30KQ7 82 aa10.95□□□□□ -0.66
PRDM16-203ENST00000378391 NEXN-AS1Q8NBZ9 246 aa10.95□□□□□ -0.66
PRDM16-203ENST00000378391 A0A0J9YXY3 114 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms