RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 LY6G6EA0A0G2JKS1 128 aa8.16□□□□□ -1.1
RTN3-206ENST00000377819 SMIM9A6NGZ8 99 aa8.16□□□□□ -1.1
RTN3-206ENST00000377819 TIMM17BO60830 172 aa8.16□□□□□ -1.1
RTN3-206ENST00000377819 RNF185Q96GF1 192 aa8.16□□□□□ -1.1
RTN3-206ENST00000377819 MSRB1Q9NZV6 116 aa8.16□□□□□ -1.1
RTN3-206ENST00000377819 DNAH12Q6ZR08 3092 aa8.16□□□□□ -1.1
RTN3-206ENST00000377819 NDUFV3P56181 108 aaKnown RBP8.15□□□□□ -1.1
RTN3-206ENST00000377819 SIRPDQ9H106 197 aa8.15□□□□□ -1.1
RTN3-206ENST00000377819 ADCYAP1P18509 176 aa8.15□□□□□ -1.1
RTN3-206ENST00000377819 LOXL1Q08397 574 aaPredicted RBP8.15□□□□□ -1.1
RTN3-206ENST00000377819 C1orf195Q5TG92 126 aa8.15□□□□□ -1.1
RTN3-206ENST00000377819 SDIM1Q6ZPB5 146 aa8.15□□□□□ -1.1
RTN3-206ENST00000377819 CHCHD10Q8WYQ3 142 aaPredicted RBP8.15□□□□□ -1.1
RTN3-206ENST00000377819 KIF26AQ9ULI4 1882 aaPredicted RBP8.15□□□□□ -1.1
RTN3-206ENST00000377819 IGHV7-81A0A0B4J1V7 117 aa8.15□□□□□ -1.1
RTN3-206ENST00000377819 TRBV27A0A0K0K1C4 114 aa8.15□□□□□ -1.1
RTN3-206ENST00000377819 DIAPH2-AS1Q14236 149 aa8.15□□□□□ -1.11
RTN3-206ENST00000377819 XAGE1AQ9HD64 81 aa8.15□□□□□ -1.11
RTN3-206ENST00000377819 CHD8Q9HCK8 2581 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 PMAIP1Q13794 54 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 MIAQ16674 131 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 CENPFP49454 3210 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 MED12LQ86YW9 2145 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 PLA2G1BP04054 148 aaKnown RBP8.14□□□□□ -1.11
RTN3-206ENST00000377819 IGLC6P0CF74 106 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 PLA2G2AP14555 144 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 ZFAND2AQ8N6M9 145 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 ZNF726P1Q15940 193 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 DOCK3Q8IZD9 2030 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 TRBV6-1A0A0K0K1D8 114 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 C3orf84H3BNL1 204 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 C15orf65H3BRN8 121 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 DHRS4-AS1Q9P1J3 65 aa8.14□□□□□ -1.11
RTN3-206ENST00000377819 TOMM6Q96B49 74 aa8.13□□□□□ -1.11
RTN3-206ENST00000377819 IBA57-AS1B1ANH7 110 aa8.12□□□□□ -1.11
RTN3-206ENST00000377819 IGLV1-44P01699 117 aa8.12□□□□□ -1.11
RTN3-206ENST00000377819 TTTY13Q9BZ97 58 aa8.12□□□□□ -1.11
RTN3-206ENST00000377819 PLXNA4Q9HCM2 1894 aa8.12□□□□□ -1.11
RTN3-206ENST00000377819 PTH2Q96A98 100 aa8.12□□□□□ -1.11
RTN3-206ENST00000377819 ALPK3Q96L96 1907 aa8.12□□□□□ -1.11
RTN3-206ENST00000377819 DENND4CQ5VZ89 1909 aa8.12□□□□□ -1.11
RTN3-206ENST00000377819 C6orf99Q4VX62 202 aa8.12□□□□□ -1.11
RTN3-206ENST00000377819 TP53BP1Q12888 1972 aaPredicted RBP8.12□□□□□ -1.11
RTN3-206ENST00000377819 IGLV11-55A0A075B6I3 123 aa8.11□□□□□ -1.11
RTN3-206ENST00000377819 SHISA2Q6UWI4 295 aa8.11□□□□□ -1.11
RTN3-206ENST00000377819 TRBV7-6A0A0J9YX20 115 aa8.11□□□□□ -1.11
RTN3-206ENST00000377819 HRCT1Q6UXD1 115 aa8.11□□□□□ -1.11
RTN3-206ENST00000377819 CTSZQ9UBR2 303 aa8.11□□□□□ -1.11
RTN3-206ENST00000377819 ZNF106Q9H2Y7 1883 aaKnown RBP8.11□□□□□ -1.11
RTN3-206ENST00000377819 TRAV10A0A0B4J240 114 aa8.11□□□□□ -1.11
RTN3-206ENST00000377819 K7EIM0 57 aa8.11□□□□□ -1.11
RTN3-206ENST00000377819 TMEM223A0PJW6 202 aa8.1□□□□□ -1.11
RTN3-206ENST00000377819 NDUFA11Q86Y39 141 aa8.1□□□□□ -1.11
RTN3-206ENST00000377819 LINC00474Q9P2X8 69 aa8.1□□□□□ -1.11
RTN3-206ENST00000377819 CSDC2Q9Y534 153 aaKnown RBP8.1□□□□□ -1.11
RTN3-206ENST00000377819 A0A0J9YX75 114 aa8.1□□□□□ -1.11
RTN3-206ENST00000377819 C4orf3Q8WVX3 66 aa8.1□□□□□ -1.11
RTN3-206ENST00000377819 PIK3CD-AS1Q5SR53 167 aa8.09□□□□□ -1.11
RTN3-206ENST00000377819 WFDC10AQ9H1F0 79 aa8.09□□□□□ -1.11
RTN3-206ENST00000377819 LY6G6CO95867 125 aa8.09□□□□□ -1.11
RTN3-206ENST00000377819 Q6ZQY7 126 aa8.09□□□□□ -1.11
RTN3-206ENST00000377819 SPRY4Q9C004 299 aa8.08□□□□□ -1.12
RTN3-206ENST00000377819 IGLV2-18A0A075B6J9 118 aa8.08□□□□□ -1.12
RTN3-206ENST00000377819 IGLV9-49A0A0B4J1Y8 123 aa8.08□□□□□ -1.12
RTN3-206ENST00000377819 I3L2K1 104 aa8.08□□□□□ -1.12
RTN3-206ENST00000377819 K7EN84 100 aa8.08□□□□□ -1.12
RTN3-206ENST00000377819 LST1O00453 97 aa8.08□□□□□ -1.12
RTN3-206ENST00000377819 SMIM26A0A096LP01 95 aa8.08□□□□□ -1.12
RTN3-206ENST00000377819 FAM215AQ9Y5M1 114 aa8.08□□□□□ -1.12
RTN3-206ENST00000377819 VWA8A3KMH1 1905 aa8.08□□□□□ -1.12
RTN3-206ENST00000377819 DAZAP2Q15038 168 aaPredicted RBP8.08□□□□□ -1.12
RTN3-206ENST00000377819 IGKV2-28A0A075B6P5 120 aa8.07□□□□□ -1.12
RTN3-206ENST00000377819 H7C423 109 aa8.07□□□□□ -1.12
RTN3-206ENST00000377819 IGKV2D-28P01615 120 aa8.07□□□□□ -1.12
RTN3-206ENST00000377819 MIFP14174 115 aa8.07□□□□□ -1.12
RTN3-206ENST00000377819 MDFICQ9P1T7 246 aa8.07□□□□□ -1.12
RTN3-206ENST00000377819 THADAQ6YHU6 1953 aa8.07□□□□□ -1.12
RTN3-206ENST00000377819 A0A0J9YXY3 114 aa8.07□□□□□ -1.12
RTN3-206ENST00000377819 Q6ZTI0 123 aa8.07□□□□□ -1.12
RTN3-206ENST00000377819 COA6Q5JTJ3 125 aaKnown RBP8.07□□□□□ -1.12
RTN3-206ENST00000377819 SNURFQ9Y675 71 aa8.07□□□□□ -1.12
RTN3-206ENST00000377819 SLPIP03973 132 aa8.07□□□□□ -1.12
RTN3-206ENST00000377819 C5orf56Q8N8D9 126 aa8.07□□□□□ -1.12
RTN3-206ENST00000377819 M0R378 163 aa8.06□□□□□ -1.12
RTN3-206ENST00000377819 RPL28P46779 137 aaKnown RBP8.06□□□□□ -1.12
RTN3-206ENST00000377819 TDRD15B5MCY1 1934 aaKnown RBP8.06□□□□□ -1.12
RTN3-206ENST00000377819 C19orf71A6NCJ1 209 aa8.06□□□□□ -1.12
RTN3-206ENST00000377819 SPINK1P00995 79 aa8.06□□□□□ -1.12
RTN3-206ENST00000377819 LINC00173Q6ZV60 143 aa8.06□□□□□ -1.12
RTN3-206ENST00000377819 M0R2N4 97 aa8.06□□□□□ -1.12
RTN3-206ENST00000377819 CFAP126Q5VTH2 177 aa8.06□□□□□ -1.12
RTN3-206ENST00000377819 LINC00208Q96KT6 92 aa8.06□□□□□ -1.12
RTN3-206ENST00000377819 CDKN2A-AS1Q9UH64 79 aa8.06□□□□□ -1.12
RTN3-206ENST00000377819 CEMP1Q6PRD7 247 aaPredicted RBP8.06□□□□□ -1.12
RTN3-206ENST00000377819 IGLV4-69A0A075B6H9 119 aa8.05□□□□□ -1.12
RTN3-206ENST00000377819 A6NDX4 124 aa8.05□□□□□ -1.12
RTN3-206ENST00000377819 Q6Q795 121 aa8.05□□□□□ -1.12
RTN3-206ENST00000377819 MAP6D1Q9H9H5 199 aa8.05□□□□□ -1.12
RTN3-206ENST00000377819 PRAC2D3DTV9 90 aa8.05□□□□□ -1.12
RTN3-206ENST00000377819 MTCL1Q9Y4B5 1905 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms