RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 HILS1P60008 231 aa14.29□□□□□ -0.12
TBC1D4-201ENST00000377625 HIST2H2BDQ6DRA6 164 aa14.29□□□□□ -0.12
TBC1D4-201ENST00000377625 PTH2Q96A98 100 aa14.29□□□□□ -0.12
TBC1D4-201ENST00000377625 SPG11Q96JI7 2443 aa14.29□□□□□ -0.12
TBC1D4-201ENST00000377625 INAFM1C9JVW0 142 aa14.29□□□□□ -0.12
TBC1D4-201ENST00000377625 TNRC6BQ9UPQ9 1833 aaKnown RBP14.28□□□□□ -0.12
TBC1D4-201ENST00000377625 IGLV2-8P01709 118 aa14.28□□□□□ -0.12
TBC1D4-201ENST00000377625 IGLC6P0CF74 106 aa14.28□□□□□ -0.12
TBC1D4-201ENST00000377625 IGKV4-1P06312 121 aa14.28□□□□□ -0.12
TBC1D4-201ENST00000377625 BRWD1-AS2P59051 145 aa14.28□□□□□ -0.12
TBC1D4-201ENST00000377625 C20orf173Q96LM9 149 aa14.28□□□□□ -0.12
TBC1D4-201ENST00000377625 WNK1Q9H4A3 2382 aa14.27□□□□□ -0.12
TBC1D4-201ENST00000377625 A0A096LNI7 61 aa14.27□□□□□ -0.12
TBC1D4-201ENST00000377625 SEC61GP60059 68 aa14.27□□□□□ -0.13
TBC1D4-201ENST00000377625 PLXNB3Q9ULL4 1909 aa14.27□□□□□ -0.13
TBC1D4-201ENST00000377625 BPY2O14599 106 aa14.27□□□□□ -0.13
TBC1D4-201ENST00000377625 TCL1BO95988 128 aa14.27□□□□□ -0.13
TBC1D4-201ENST00000377625 SPATA12Q7Z6I5 190 aa14.26□□□□□ -0.13
TBC1D4-201ENST00000377625 TTC28Q96AY4 2481 aa14.26□□□□□ -0.13
TBC1D4-201ENST00000377625 NDUFC2O95298 119 aa14.26□□□□□ -0.13
TBC1D4-201ENST00000377625 FAM19A1Q7Z5A9 133 aa14.26□□□□□ -0.13
TBC1D4-201ENST00000377625 LRCOL1A6NCL2 159 aa14.25□□□□□ -0.13
TBC1D4-201ENST00000377625 A0A087WZ39 114 aa14.25□□□□□ -0.13
TBC1D4-201ENST00000377625 C1orf229Q6ZS94 237 aaPredicted RBP14.25□□□□□ -0.13
TBC1D4-201ENST00000377625 C22orf34Q6ZV56 151 aa14.25□□□□□ -0.13
TBC1D4-201ENST00000377625 CDKN2A-AS1Q9UH64 79 aa14.25□□□□□ -0.13
TBC1D4-201ENST00000377625 PLA2G5P39877 138 aa14.25□□□□□ -0.13
TBC1D4-201ENST00000377625 RNASE8Q8TDE3 154 aaKnown RBP14.25□□□□□ -0.13
TBC1D4-201ENST00000377625 H7C423 109 aa14.25□□□□□ -0.13
TBC1D4-201ENST00000377625 NEXN-AS1Q8NBZ9 246 aa14.24□□□□□ -0.13
TBC1D4-201ENST00000377625 J3KT08 172 aa14.24□□□□□ -0.13
TBC1D4-201ENST00000377625 GDF5OSQ5U4N7 250 aa14.23□□□□□ -0.13
TBC1D4-201ENST00000377625 LINC00482Q8N8I6 264 aa14.23□□□□□ -0.13
TBC1D4-201ENST00000377625 UPK3BQ9BT76 320 aa14.23□□□□□ -0.13
TBC1D4-201ENST00000377625 ADAMTS9Q9P2N4 1935 aa14.23□□□□□ -0.13
TBC1D4-201ENST00000377625 TECTAO75443 2155 aa14.22□□□□□ -0.13
TBC1D4-201ENST00000377625 Q6ZSV7 163 aa14.22□□□□□ -0.13
TBC1D4-201ENST00000377625 LINC00643Q86TS7 51 aa14.22□□□□□ -0.13
TBC1D4-201ENST00000377625 MLST8Q9BVC4 326 aa14.22□□□□□ -0.13
TBC1D4-201ENST00000377625 Q6ZPA2 131 aa14.22□□□□□ -0.13
TBC1D4-201ENST00000377625 TRAV23DV6A0A075B6W5 121 aa14.21□□□□□ -0.13
TBC1D4-201ENST00000377625 CFAP126Q5VTH2 177 aa14.21□□□□□ -0.14
TBC1D4-201ENST00000377625 ANKHD1Q8IWZ3 2542 aaKnown RBP14.21□□□□□ -0.14
TBC1D4-201ENST00000377625 FSTL3O95633 263 aa14.2□□□□□ -0.14
TBC1D4-201ENST00000377625 IGLV4-3A0A075B6K6 122 aa14.2□□□□□ -0.14
TBC1D4-201ENST00000377625 CSPG4Q6UVK1 2322 aa14.2□□□□□ -0.14
TBC1D4-201ENST00000377625 KIR2DL5BQ8NHK3 375 aa14.2□□□□□ -0.14
TBC1D4-201ENST00000377625 G3V4G9 280 aa14.2□□□□□ -0.14
TBC1D4-201ENST00000377625 MIFP14174 115 aa14.2□□□□□ -0.14
TBC1D4-201ENST00000377625 COL4A3Q01955 1670 aa14.19□□□□□ -0.14
TBC1D4-201ENST00000377625 SHISA2Q6UWI4 295 aa14.19□□□□□ -0.14
TBC1D4-201ENST00000377625 ZNF22P17026 224 aaPredicted RBP14.19□□□□□ -0.14
TBC1D4-201ENST00000377625 ZFAND3Q9H8U3 227 aa14.19□□□□□ -0.14
TBC1D4-201ENST00000377625 TRBV6-8A0A0A6YYG3 113 aa14.19□□□□□ -0.14
TBC1D4-201ENST00000377625 CUL9Q8IWT3 2517 aa14.19□□□□□ -0.14
TBC1D4-201ENST00000377625 FREM1Q5H8C1 2179 aa14.19□□□□□ -0.14
TBC1D4-201ENST00000377625 TMEM223A0PJW6 202 aa14.19□□□□□ -0.14
TBC1D4-201ENST00000377625 EBI3Q14213 229 aa14.19□□□□□ -0.14
TBC1D4-201ENST00000377625 OBSL1O75147 1896 aa14.19□□□□□ -0.14
TBC1D4-201ENST00000377625 C10orf99Q6UWK7 81 aa14.18□□□□□ -0.14
TBC1D4-201ENST00000377625 FAM19A5Q7Z5A7 132 aaPredicted RBP14.18□□□□□ -0.14
TBC1D4-201ENST00000377625 OTOGLQ3ZCN5 2332 aa14.18□□□□□ -0.14
TBC1D4-201ENST00000377625 LY6LH3BQJ8 138 aa14.18□□□□□ -0.14
TBC1D4-201ENST00000377625 IBA57-AS1B1ANH7 110 aa14.17□□□□□ -0.14
TBC1D4-201ENST00000377625 XAGE1AQ9HD64 81 aa14.17□□□□□ -0.14
TBC1D4-201ENST00000377625 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.17□□□□□ -0.14
TBC1D4-201ENST00000377625 SONP18583 2426 aaKnown RBP14.17□□□□□ -0.14
TBC1D4-201ENST00000377625 CASC2Q6XLA1 102 aa14.17□□□□□ -0.14
TBC1D4-201ENST00000377625 ZNF295-AS1Q8N0V1 137 aa14.17□□□□□ -0.14
TBC1D4-201ENST00000377625 M0QY20 66 aa14.16□□□□□ -0.14
TBC1D4-201ENST00000377625 TRBV6-4A0A1B0GX49 114 aa14.16□□□□□ -0.14
TBC1D4-201ENST00000377625 SLPIP03973 132 aa14.16□□□□□ -0.14
TBC1D4-201ENST00000377625 EIF4EBP1Q13541 118 aaPredicted RBP14.16□□□□□ -0.14
TBC1D4-201ENST00000377625 ARHGAP21Q5T5U3 1957 aa14.16□□□□□ -0.14
TBC1D4-201ENST00000377625 DSCAML1Q8TD84 2053 aa14.16□□□□□ -0.14
TBC1D4-201ENST00000377625 PIK3CD-AS1Q5SR53 167 aa14.15□□□□□ -0.14
TBC1D4-201ENST00000377625 LINC00308Q8TCZ7 52 aa14.15□□□□□ -0.14
TBC1D4-201ENST00000377625 Q8N976 141 aa14.15□□□□□ -0.14
TBC1D4-201ENST00000377625 PROK1P58294 105 aa14.14□□□□□ -0.15
TBC1D4-201ENST00000377625 TMEM131Q92545 1883 aa14.14□□□□□ -0.15
TBC1D4-201ENST00000377625 TEX49A0A1B0GTD5 131 aa14.14□□□□□ -0.15
TBC1D4-201ENST00000377625 SYCNQ0VAF6 134 aa14.13□□□□□ -0.15
TBC1D4-201ENST00000377625 C11orf71Q6IPW1 123 aa14.13□□□□□ -0.15
TBC1D4-201ENST00000377625 SCXQ7RTU7 201 aa14.13□□□□□ -0.15
TBC1D4-201ENST00000377625 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.13□□□□□ -0.15
TBC1D4-201ENST00000377625 CRIP1P50238 77 aa14.13□□□□□ -0.15
TBC1D4-201ENST00000377625 CRIP3Q6Q6R5 217 aa14.13□□□□□ -0.15
TBC1D4-201ENST00000377625 SPANXB1Q9NS25 103 aaPredicted RBP14.13□□□□□ -0.15
TBC1D4-201ENST00000377625 SDIM1Q6ZPB5 146 aa14.13□□□□□ -0.15
TBC1D4-201ENST00000377625 MBD6Q96DN6 1003 aa14.13□□□□□ -0.15
TBC1D4-201ENST00000377625 BBC3Q96PG8 261 aaPredicted RBP14.12□□□□□ -0.15
TBC1D4-201ENST00000377625 PTPN13Q12923 2485 aa14.12□□□□□ -0.15
TBC1D4-201ENST00000377625 C2orf16Q68DN1 1984 aa14.12□□□□□ -0.15
TBC1D4-201ENST00000377625 USP17L23D6RBM5 183 aa14.12□□□□□ -0.15
TBC1D4-201ENST00000377625 ZNF843Q8N446 348 aa14.12□□□□□ -0.15
TBC1D4-201ENST00000377625 NCOA6Q14686 2063 aaPredicted RBP14.11□□□□□ -0.15
TBC1D4-201ENST00000377625 LY6G6DO95868 133 aa14.11□□□□□ -0.15
TBC1D4-201ENST00000377625 SORL1Q92673 2214 aa14.11□□□□□ -0.15
TBC1D4-201ENST00000377625 TRAV10A0A0B4J240 114 aa14.11□□□□□ -0.15
TBC1D4-201ENST00000377625 DCANP1Q8TF63 244 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms