RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 LINC01619G3V211 115 aa9.51□□□□□ -0.89
USP11-204ENST00000377107 IGHV4-31P0DP07 118 aa9.51□□□□□ -0.89
USP11-204ENST00000377107 DAND5Q8N907 189 aa9.51□□□□□ -0.89
USP11-204ENST00000377107 Q6ZSN1 163 aa9.5□□□□□ -0.89
USP11-204ENST00000377107 TIMM21Q9BVV7 248 aa9.5□□□□□ -0.89
USP11-204ENST00000377107 GAGE12HA6NDE8 117 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 MUSTN1Q8IVN3 82 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 SIGMAR1Q99720 223 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 H3BMM0 161 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 NXPH4O95158 308 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 Q6YL49 198 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 NDUFA11Q86Y39 141 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 IGLV4-3A0A075B6K6 122 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 CFC1BP0CG36 223 aa9.48□□□□□ -0.89
USP11-204ENST00000377107 CFC1P0CG37 223 aa9.48□□□□□ -0.89
USP11-204ENST00000377107 ZNF22P17026 224 aaPredicted RBP9.48□□□□□ -0.89
USP11-204ENST00000377107 STHQ8IWL8 128 aa9.48□□□□□ -0.89
USP11-204ENST00000377107 RHODO00212 210 aa9.48□□□□□ -0.89
USP11-204ENST00000377107 PRO1854Q9UHT4 67 aa9.48□□□□□ -0.89
USP11-204ENST00000377107 RBMY1BA6NDE4 496 aaKnown RBP9.48□□□□□ -0.89
USP11-204ENST00000377107 RBMY1EA6NEQ0 496 aaKnown RBP9.48□□□□□ -0.89
USP11-204ENST00000377107 RBMY1DP0C7P1 496 aaKnown RBP9.48□□□□□ -0.89
USP11-204ENST00000377107 ZNF415Q09FC8 603 aa9.48□□□□□ -0.89
USP11-204ENST00000377107 TRAV13-1A0A0B4J241 112 aa9.47□□□□□ -0.89
USP11-204ENST00000377107 C9JAW5 83 aa9.47□□□□□ -0.89
USP11-204ENST00000377107 TCL1BO95988 128 aa9.47□□□□□ -0.89
USP11-204ENST00000377107 RPL35AP18077 110 aaKnown RBP9.47□□□□□ -0.89
USP11-204ENST00000377107 ERG28Q9UKR5 140 aa9.47□□□□□ -0.89
USP11-204ENST00000377107 J3QLI3 93 aa9.47□□□□□ -0.89
USP11-204ENST00000377107 RHOHQ15669 191 aa9.47□□□□□ -0.89
USP11-204ENST00000377107 NBEAL2Q6ZNJ1 2754 aa9.46□□□□□ -0.89
USP11-204ENST00000377107 TMEM238C9JI98 176 aa9.46□□□□□ -0.89
USP11-204ENST00000377107 M0R2P5 195 aa9.46□□□□□ -0.89
USP11-204ENST00000377107 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.89
USP11-204ENST00000377107 BRI3O95415 125 aa9.46□□□□□ -0.9
USP11-204ENST00000377107 IGHV3-30P01768 117 aa9.46□□□□□ -0.9
USP11-204ENST00000377107 IGHV3-30-3P0DP02 117 aa9.46□□□□□ -0.9
USP11-204ENST00000377107 IGHV3-30-5P0DP03 117 aa9.46□□□□□ -0.9
USP11-204ENST00000377107 SLC25A29Q8N8R3 303 aa9.46□□□□□ -0.9
USP11-204ENST00000377107 LYRM7Q5U5X0 104 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 Q6ZUT4 128 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 NDUFA12Q9UI09 145 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 TRBV6-5A0A0K0K1A5 114 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 DEFB113Q30KQ7 82 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 Q6ZSV7 163 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 C10orf126Q8N4M7 172 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 LINC00467Q9BRT7 94 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 APCP25054 2843 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 HECTD1Q9ULT8 2610 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 TMEM223A0PJW6 202 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 LEPROTO15243 131 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 WFDC11Q8NEX6 87 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 FASNP49327 2511 aaKnown RBP9.44□□□□□ -0.9
USP11-204ENST00000377107 A8MWV9 139 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 INSP01308 110 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 WFDC10AQ9H1F0 79 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 NDUFA7O95182 113 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 UBE2D1P51668 147 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 GAGE4Q13068 117 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 GAGE5Q13069 117 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 NSUN5P1Q3KNT7 163 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 ODF3Q96PU9 254 aa9.43□□□□□ -0.9
USP11-204ENST00000377107 CFAP126Q5VTH2 177 aa9.43□□□□□ -0.9
USP11-204ENST00000377107 A0A0J9YXY3 114 aa9.42□□□□□ -0.9
USP11-204ENST00000377107 DEFB114Q30KQ6 69 aa9.42□□□□□ -0.9
USP11-204ENST00000377107 TRGV2A0A075B6R0 118 aa9.42□□□□□ -0.9
USP11-204ENST00000377107 CIDEAO60543 219 aa9.42□□□□□ -0.9
USP11-204ENST00000377107 RPL32P62910 135 aaKnown RBP9.42□□□□□ -0.9
USP11-204ENST00000377107 FOXI1Q12951 378 aa9.42□□□□□ -0.9
USP11-204ENST00000377107 POM121L12Q8N7R1 296 aa9.42□□□□□ -0.9
USP11-204ENST00000377107 GCN1Q92616 2671 aaKnown RBP9.41□□□□□ -0.9
USP11-204ENST00000377107 ITPR2Q14571 2701 aa9.41□□□□□ -0.9
USP11-204ENST00000377107 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
USP11-204ENST00000377107 NFE4Q86UQ8 179 aa9.41□□□□□ -0.9
USP11-204ENST00000377107 NOP10Q9NPE3 64 aaKnown RBP9.41□□□□□ -0.9
USP11-204ENST00000377107 YAE1D1Q9NRH1 226 aa9.41□□□□□ -0.9
USP11-204ENST00000377107 CDKN2A-AS1Q9UH64 79 aa9.41□□□□□ -0.9
USP11-204ENST00000377107 TMEM89A2RUT3 159 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 Q6ZTI0 123 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 GAGE7O76087 117 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 GAGE12FP0CL80 117 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 GAGE12GP0CL81 117 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 GAGE12IP0CL82 117 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 MEIG1Q5JSS6 88 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 HELZ2Q9BYK8 2649 aaKnown RBP9.4□□□□□ -0.9
USP11-204ENST00000377107 A0A096LNT2 108 aa9.4□□□□□ -0.91
USP11-204ENST00000377107 PLA2G2AP14555 144 aa9.4□□□□□ -0.91
USP11-204ENST00000377107 ZNF843Q8N446 348 aa9.4□□□□□ -0.91
USP11-204ENST00000377107 CITED2Q99967 270 aaPredicted RBP9.4□□□□□ -0.91
USP11-204ENST00000377107 C1QTNF4Q9BXJ3 329 aa9.4□□□□□ -0.91
USP11-204ENST00000377107 PRO0461Q9UI25 63 aa9.4□□□□□ -0.91
USP11-204ENST00000377107 CCL24O00175 119 aa9.39□□□□□ -0.91
USP11-204ENST00000377107 SLC25A20O43772 301 aa9.39□□□□□ -0.91
USP11-204ENST00000377107 ADAMTSL4-AS1Q5T5F5 129 aa9.39□□□□□ -0.91
USP11-204ENST00000377107 ANKRD29Q8N6D5 301 aa9.39□□□□□ -0.91
USP11-204ENST00000377107 C4orf3Q8WVX3 66 aa9.38□□□□□ -0.91
USP11-204ENST00000377107 DNAJC9-AS1A6NH13 148 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms