RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 KRTAP26-1Q6PEX3 210 aa9.5□□□□□ -0.89
HDAC6-204ENST00000376643 C9orf62Q8N4C0 152 aa9.5□□□□□ -0.89
HDAC6-204ENST00000376643 C20orf203Q8NBC4 194 aa9.5□□□□□ -0.89
HDAC6-204ENST00000376643 IGLV10-54A0A075B6I4 117 aa9.49□□□□□ -0.89
HDAC6-204ENST00000376643 BCL2P10415 239 aa9.49□□□□□ -0.89
HDAC6-204ENST00000376643 NTF3P20783 257 aa9.49□□□□□ -0.89
HDAC6-204ENST00000376643 CTRLP40313 264 aa9.49□□□□□ -0.89
HDAC6-204ENST00000376643 TEX261Q6UWH6 196 aa9.49□□□□□ -0.89
HDAC6-204ENST00000376643 LYZL1Q6UWQ5 148 aa9.49□□□□□ -0.89
HDAC6-204ENST00000376643 SDIM1Q6ZPB5 146 aa9.49□□□□□ -0.89
HDAC6-204ENST00000376643 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
HDAC6-204ENST00000376643 NCR2O95944 276 aa9.48□□□□□ -0.89
HDAC6-204ENST00000376643 CIRBPQ14011 172 aaKnown RBP9.48□□□□□ -0.89
HDAC6-204ENST00000376643 CNFNQ9BYD5 112 aa9.48□□□□□ -0.89
HDAC6-204ENST00000376643 PKIGQ9Y2B9 76 aa9.48□□□□□ -0.89
HDAC6-204ENST00000376643 RAB19A4D1S5 217 aa9.47□□□□□ -0.89
HDAC6-204ENST00000376643 H7C423 109 aa9.47□□□□□ -0.89
HDAC6-204ENST00000376643 TWIST1Q15672 202 aa9.47□□□□□ -0.89
HDAC6-204ENST00000376643 AMMECR1LQ6DCA0 310 aa9.47□□□□□ -0.89
HDAC6-204ENST00000376643 Q6ZRU5 148 aa9.47□□□□□ -0.89
HDAC6-204ENST00000376643 FAM210AQ96ND0 272 aa9.47□□□□□ -0.89
HDAC6-204ENST00000376643 RPP21Q9H633 154 aaKnown RBP9.47□□□□□ -0.89
HDAC6-204ENST00000376643 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-204ENST00000376643 IGLV4-60A0A075B6I1 120 aa9.46□□□□□ -0.9
HDAC6-204ENST00000376643 SLC51BQ86UW2 128 aa9.46□□□□□ -0.9
HDAC6-204ENST00000376643 TCTE3Q8IZS6 198 aa9.46□□□□□ -0.9
HDAC6-204ENST00000376643 PLA2G2DQ9UNK4 145 aa9.46□□□□□ -0.9
HDAC6-204ENST00000376643 NUDT10Q8NFP7 164 aa9.45□□□□□ -0.9
HDAC6-204ENST00000376643 C7orf33Q8WU49 177 aa9.45□□□□□ -0.9
HDAC6-204ENST00000376643 NUDT11Q96G61 164 aa9.45□□□□□ -0.9
HDAC6-204ENST00000376643 TRBV20OR9-2A0A075B6H5 130 aa9.44□□□□□ -0.9
HDAC6-204ENST00000376643 APCSP02743 223 aa9.44□□□□□ -0.9
HDAC6-204ENST00000376643 ZNF25P17030 456 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-204ENST00000376643 AKAP14Q86UN6 197 aa9.43□□□□□ -0.9
HDAC6-204ENST00000376643 BORCS7Q96B45 105 aa9.43□□□□□ -0.9
HDAC6-204ENST00000376643 RPS10P46783 165 aaKnown RBP9.42□□□□□ -0.9
HDAC6-204ENST00000376643 SPACA4Q8TDM5 124 aa9.42□□□□□ -0.9
HDAC6-204ENST00000376643 BTF3L4Q96K17 158 aa9.42□□□□□ -0.9
HDAC6-204ENST00000376643 A0A087WYN8 130 aa9.41□□□□□ -0.9
HDAC6-204ENST00000376643 GAGE12HA6NDE8 117 aa9.41□□□□□ -0.9
HDAC6-204ENST00000376643 A8MWL6 223 aa9.41□□□□□ -0.9
HDAC6-204ENST00000376643 TMEM250H0YL14 139 aa9.41□□□□□ -0.9
HDAC6-204ENST00000376643 RNASEKQ6P5S7 137 aaKnown RBP9.41□□□□□ -0.9
HDAC6-204ENST00000376643 GATD1Q8NB37 220 aa9.41□□□□□ -0.9
HDAC6-204ENST00000376643 TMEM101Q96IK0 257 aa9.41□□□□□ -0.9
HDAC6-204ENST00000376643 GFRA4Q9GZZ7 299 aa9.41□□□□□ -0.9
HDAC6-204ENST00000376643 LINC00474Q9P2X8 69 aa9.41□□□□□ -0.9
HDAC6-204ENST00000376643 NDUFS6O75380 124 aaKnown RBP9.4□□□□□ -0.9
HDAC6-204ENST00000376643 RNASE7Q9H1E1 156 aaKnown RBP9.4□□□□□ -0.9
HDAC6-204ENST00000376643 PLAC8Q9NZF1 115 aa9.4□□□□□ -0.9
HDAC6-204ENST00000376643 IGKV3OR2-268A0A0C4DH90 116 aa9.39□□□□□ -0.91
HDAC6-204ENST00000376643 PANO1I0J062 215 aa9.39□□□□□ -0.91
HDAC6-204ENST00000376643 I3L3M4 83 aa9.39□□□□□ -0.91
HDAC6-204ENST00000376643 GATCO43716 136 aaKnown RBP9.39□□□□□ -0.91
HDAC6-204ENST00000376643 BLOC1S1P78537 153 aa9.39□□□□□ -0.91
HDAC6-204ENST00000376643 CT83Q5H943 113 aa9.39□□□□□ -0.91
HDAC6-204ENST00000376643 FAM231DQ6ZW35 169 aa9.39□□□□□ -0.91
HDAC6-204ENST00000376643 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
HDAC6-204ENST00000376643 OCC1Q8TAD7 63 aa9.39□□□□□ -0.91
HDAC6-204ENST00000376643 CHCHD10Q8WYQ3 142 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-204ENST00000376643 GVQW2A0A096LPI5 108 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-204ENST00000376643 TRAV26-2A0A0B4J265 109 aa9.38□□□□□ -0.91
HDAC6-204ENST00000376643 SDHAF1A6NFY7 115 aa9.38□□□□□ -0.91
HDAC6-204ENST00000376643 FGF6P10767 208 aa9.38□□□□□ -0.91
HDAC6-204ENST00000376643 PMCHP20382 165 aa9.38□□□□□ -0.91
HDAC6-204ENST00000376643 SMAGPQ0VAQ4 97 aa9.38□□□□□ -0.91
HDAC6-204ENST00000376643 OR5A1Q8NGJ0 315 aa9.38□□□□□ -0.91
HDAC6-204ENST00000376643 TRBV6-5A0A0K0K1A5 114 aa9.37□□□□□ -0.91
HDAC6-204ENST00000376643 K7EN84 100 aa9.37□□□□□ -0.91
HDAC6-204ENST00000376643 HNRNPA3P51991 378 aaKnown RBP9.37□□□□□ -0.91
HDAC6-204ENST00000376643 MRAP2Q96G30 205 aa9.37□□□□□ -0.91
HDAC6-204ENST00000376643 LRP1Q07954 4544 aaKnown RBP9.36□□□□□ -0.91
HDAC6-204ENST00000376643 SLPIP03973 132 aa9.36□□□□□ -0.91
HDAC6-204ENST00000376643 COX6A2Q02221 97 aa9.36□□□□□ -0.91
HDAC6-204ENST00000376643 HIGD2BQ4VC39 106 aa9.36□□□□□ -0.91
HDAC6-204ENST00000376643 GTSF1Q8WW33 167 aa9.36□□□□□ -0.91
HDAC6-204ENST00000376643 RPL39LQ96EH5 51 aaKnown RBP9.36□□□□□ -0.91
HDAC6-204ENST00000376643 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-204ENST00000376643 IGHV1-58A0A0C4DH39 117 aa9.35□□□□□ -0.91
HDAC6-204ENST00000376643 IGKV2-29A2NJV5 120 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-204ENST00000376643 PPP1R17O96001 155 aa9.35□□□□□ -0.91
HDAC6-204ENST00000376643 CHTF8P0CG12 524 aa9.35□□□□□ -0.91
HDAC6-204ENST00000376643 FOXA3P55318 350 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-204ENST00000376643 SS18Q15532 418 aa9.35□□□□□ -0.91
HDAC6-204ENST00000376643 MAJINQ3KP22 176 aa9.35□□□□□ -0.91
HDAC6-204ENST00000376643 ST20Q9HBF5 79 aa9.35□□□□□ -0.91
HDAC6-204ENST00000376643 FAM231BA6NCW3 169 aa9.34□□□□□ -0.91
HDAC6-204ENST00000376643 PHOX2AO14813 284 aa9.34□□□□□ -0.91
HDAC6-204ENST00000376643 IGKV2-24A0A0C4DH68 120 aa9.33□□□□□ -0.92
HDAC6-204ENST00000376643 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
HDAC6-204ENST00000376643 FOXI1Q12951 378 aa9.33□□□□□ -0.92
HDAC6-204ENST00000376643 STPG4Q8N801 248 aa9.33□□□□□ -0.92
HDAC6-204ENST00000376643 ISOC2Q96AB3 205 aa9.33□□□□□ -0.92
HDAC6-204ENST00000376643 FAT3Q8TDW7 4589 aa9.32□□□□□ -0.92
HDAC6-204ENST00000376643 LINC00959A0A1B0GUT2 108 aa9.32□□□□□ -0.92
HDAC6-204ENST00000376643 ZNF561-AS1K7EIQ3 104 aa9.32□□□□□ -0.92
HDAC6-204ENST00000376643 CCL25O15444 150 aa9.32□□□□□ -0.92
HDAC6-204ENST00000376643 XCL1P47992 114 aa9.32□□□□□ -0.92
HDAC6-204ENST00000376643 MRPL52Q86TS9 123 aaKnown RBP9.32□□□□□ -0.92
HDAC6-204ENST00000376643 TSKUQ8WUA8 353 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms