RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 DPH3Q96FX2 82 aa9.46□□□□□ -0.9
CLCN6-204ENST00000376491 DPH3P1Q9H4G8 78 aa9.46□□□□□ -0.9
CLCN6-204ENST00000376491 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.45□□□□□ -0.9
CLCN6-204ENST00000376491 F2Z2F3 143 aa9.45□□□□□ -0.9
CLCN6-204ENST00000376491 TRGC1P0CF51 173 aa9.45□□□□□ -0.9
CLCN6-204ENST00000376491 GNG4P50150 75 aa9.45□□□□□ -0.9
CLCN6-204ENST00000376491 EIF5AP63241 154 aaKnown RBP9.45□□□□□ -0.9
CLCN6-204ENST00000376491 SMIM12Q96EX1 92 aa9.45□□□□□ -0.9
CLCN6-204ENST00000376491 RNF185Q96GF1 192 aa9.45□□□□□ -0.9
CLCN6-204ENST00000376491 UBE2L6O14933 153 aa9.44□□□□□ -0.9
CLCN6-204ENST00000376491 IFNA1P01562 189 aa9.44□□□□□ -0.9
CLCN6-204ENST00000376491 AMTP48728 403 aa9.44□□□□□ -0.9
CLCN6-204ENST00000376491 COTL1Q14019 142 aa9.44□□□□□ -0.9
CLCN6-204ENST00000376491 PLAC8Q9NZF1 115 aa9.44□□□□□ -0.9
CLCN6-204ENST00000376491 XKRY2A2RUG3 117 aa9.43□□□□□ -0.9
CLCN6-204ENST00000376491 GAGE12HA6NDE8 117 aa9.43□□□□□ -0.9
CLCN6-204ENST00000376491 SULT1A2P50226 295 aa9.43□□□□□ -0.9
CLCN6-204ENST00000376491 C9orf62Q8N4C0 152 aa9.43□□□□□ -0.9
CLCN6-204ENST00000376491 IGKV3OR2-268A0A0C4DH90 116 aa9.42□□□□□ -0.9
CLCN6-204ENST00000376491 PHOX2AO14813 284 aa9.42□□□□□ -0.9
CLCN6-204ENST00000376491 CTRLP40313 264 aa9.42□□□□□ -0.9
CLCN6-204ENST00000376491 MEF2BQ02080 365 aaPredicted RBP9.42□□□□□ -0.9
CLCN6-204ENST00000376491 COX6A2Q02221 97 aa9.42□□□□□ -0.9
CLCN6-204ENST00000376491 WDR73Q6P4I2 378 aa9.42□□□□□ -0.9
CLCN6-204ENST00000376491 GATD1Q8NB37 220 aa9.42□□□□□ -0.9
CLCN6-204ENST00000376491 NUDT10Q8NFP7 164 aa9.42□□□□□ -0.9
CLCN6-204ENST00000376491 NUDT11Q96G61 164 aa9.42□□□□□ -0.9
CLCN6-204ENST00000376491 MED9Q9NWA0 146 aa9.42□□□□□ -0.9
CLCN6-204ENST00000376491 TNXBP22105 4242 aa9.42□□□□□ -0.9
CLCN6-204ENST00000376491 TRAV26-2A0A0B4J265 109 aa9.41□□□□□ -0.9
CLCN6-204ENST00000376491 HIGD2BQ4VC39 106 aa9.41□□□□□ -0.9
CLCN6-204ENST00000376491 Q6ZNX1 250 aa9.41□□□□□ -0.9
CLCN6-204ENST00000376491 PRSS3P2Q8NHM4 247 aa9.41□□□□□ -0.9
CLCN6-204ENST00000376491 CNFNQ9BYD5 112 aa9.41□□□□□ -0.9
CLCN6-204ENST00000376491 LRP2P98164 4655 aa9.41□□□□□ -0.9
CLCN6-204ENST00000376491 PDE6DO43924 150 aa9.4□□□□□ -0.9
CLCN6-204ENST00000376491 RPS10P46783 165 aaKnown RBP9.4□□□□□ -0.9
CLCN6-204ENST00000376491 CFAP161Q6P656 301 aa9.4□□□□□ -0.9
CLCN6-204ENST00000376491 NDUFS6O75380 124 aaKnown RBP9.39□□□□□ -0.91
CLCN6-204ENST00000376491 TWIST1Q15672 202 aa9.39□□□□□ -0.91
CLCN6-204ENST00000376491 CHCHD10Q8WYQ3 142 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-204ENST00000376491 RPL39LQ96EH5 51 aaKnown RBP9.39□□□□□ -0.91
CLCN6-204ENST00000376491 BIN3Q9NQY0 253 aa9.39□□□□□ -0.91
CLCN6-204ENST00000376491 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.38□□□□□ -0.91
CLCN6-204ENST00000376491 IGKV2-24A0A0C4DH68 120 aa9.38□□□□□ -0.91
CLCN6-204ENST00000376491 IGKV2-29A2NJV5 120 aaPredicted RBP9.38□□□□□ -0.91
CLCN6-204ENST00000376491 TEX46H3BTG2 121 aa9.38□□□□□ -0.91
CLCN6-204ENST00000376491 BCL2P10415 239 aa9.38□□□□□ -0.91
CLCN6-204ENST00000376491 FOXA3P55318 350 aaPredicted RBP9.38□□□□□ -0.91
CLCN6-204ENST00000376491 MAJINQ3KP22 176 aa9.38□□□□□ -0.91
CLCN6-204ENST00000376491 RNASE7Q9H1E1 156 aaKnown RBP9.38□□□□□ -0.91
CLCN6-204ENST00000376491 K7EN84 100 aa9.37□□□□□ -0.91
CLCN6-204ENST00000376491 RNASEKQ6P5S7 137 aaKnown RBP9.37□□□□□ -0.91
CLCN6-204ENST00000376491 C7orf33Q8WU49 177 aa9.37□□□□□ -0.91
CLCN6-204ENST00000376491 GTSF1Q8WW33 167 aa9.37□□□□□ -0.91
CLCN6-204ENST00000376491 RPP21Q9H633 154 aaKnown RBP9.37□□□□□ -0.91
CLCN6-204ENST00000376491 GVQW2A0A096LPI5 108 aaPredicted RBP9.36□□□□□ -0.91
CLCN6-204ENST00000376491 NCR2O95944 276 aa9.36□□□□□ -0.91
CLCN6-204ENST00000376491 PRR3P79522 188 aaKnown RBP9.36□□□□□ -0.91
CLCN6-204ENST00000376491 FOXI1Q12951 378 aa9.36□□□□□ -0.91
CLCN6-204ENST00000376491 ODF1Q14990 250 aa9.36□□□□□ -0.91
CLCN6-204ENST00000376491 AMMECR1LQ6DCA0 310 aa9.36□□□□□ -0.91
CLCN6-204ENST00000376491 EIF5AL1Q6IS14 154 aaKnown RBP9.36□□□□□ -0.91
CLCN6-204ENST00000376491 OCC1Q8TAD7 63 aa9.36□□□□□ -0.91
CLCN6-204ENST00000376491 A0A096LNI7 61 aa9.35□□□□□ -0.91
CLCN6-204ENST00000376491 FAM231BA6NCW3 169 aa9.35□□□□□ -0.91
CLCN6-204ENST00000376491 FGF6P10767 208 aa9.35□□□□□ -0.91
CLCN6-204ENST00000376491 STPG4Q8N801 248 aa9.35□□□□□ -0.91
CLCN6-204ENST00000376491 LINC01600Q96MT4 127 aa9.35□□□□□ -0.91
CLCN6-204ENST00000376491 SDHAF1A6NFY7 115 aa9.34□□□□□ -0.91
CLCN6-204ENST00000376491 H7C423 109 aa9.34□□□□□ -0.91
CLCN6-204ENST00000376491 APCSP02743 223 aa9.34□□□□□ -0.91
CLCN6-204ENST00000376491 LYPD6BQ8NI32 183 aa9.34□□□□□ -0.91
CLCN6-204ENST00000376491 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
CLCN6-204ENST00000376491 LINC00526Q96FQ7 95 aa9.33□□□□□ -0.92
CLCN6-204ENST00000376491 GAS8-AS1O95177 125 aa9.32□□□□□ -0.92
CLCN6-204ENST00000376491 LINC00959A0A1B0GUT2 108 aa9.31□□□□□ -0.92
CLCN6-204ENST00000376491 ESDP10768 282 aa9.31□□□□□ -0.92
CLCN6-204ENST00000376491 ZNF25P17030 456 aaPredicted RBP9.31□□□□□ -0.92
CLCN6-204ENST00000376491 XCL1P47992 114 aa9.31□□□□□ -0.92
CLCN6-204ENST00000376491 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
CLCN6-204ENST00000376491 I3L3M4 83 aa9.3□□□□□ -0.92
CLCN6-204ENST00000376491 CCL25O15444 150 aa9.3□□□□□ -0.92
CLCN6-204ENST00000376491 PMCHP20382 165 aa9.3□□□□□ -0.92
CLCN6-204ENST00000376491 TAGLN2P37802 199 aaKnown RBP9.3□□□□□ -0.92
CLCN6-204ENST00000376491 TEX261Q6UWH6 196 aa9.3□□□□□ -0.92
CLCN6-204ENST00000376491 SMIM15Q7Z3B0 74 aa9.3□□□□□ -0.92
CLCN6-204ENST00000376491 IGHV1-58A0A0C4DH39 117 aa9.29□□□□□ -0.92
CLCN6-204ENST00000376491 A0A0J9YXV3 536 aa9.29□□□□□ -0.92
CLCN6-204ENST00000376491 GATCO43716 136 aaKnown RBP9.29□□□□□ -0.92
CLCN6-204ENST00000376491 TSHBP01222 138 aa9.29□□□□□ -0.92
CLCN6-204ENST00000376491 SLC51BQ86UW2 128 aa9.29□□□□□ -0.92
CLCN6-204ENST00000376491 TMEM242Q9NWH2 141 aa9.29□□□□□ -0.92
CLCN6-204ENST00000376491 KRTAP10-8P60410 259 aa9.28□□□□□ -0.92
CLCN6-204ENST00000376491 FAM231DQ6ZW35 169 aa9.28□□□□□ -0.92
CLCN6-204ENST00000376491 BTF3L4Q96K17 158 aa9.28□□□□□ -0.92
CLCN6-204ENST00000376491 CARD19Q96LW7 228 aa9.28□□□□□ -0.92
CLCN6-204ENST00000376491 A8MWL6 223 aa9.27□□□□□ -0.93
CLCN6-204ENST00000376491 SRSF9Q13242 221 aaKnown RBP eCLIP9.27□□□□□ -0.93
CLCN6-204ENST00000376491 SPINK6Q6UWN8 80 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms