RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ERG28Q9UKR5 140 aa10.42□□□□□ -0.74
CLCNKA-202ENST00000375692 H3BUA1 57 aa10.42□□□□□ -0.74
CLCNKA-202ENST00000375692 RHODO00212 210 aa10.42□□□□□ -0.74
CLCNKA-202ENST00000375692 C10orf99Q6UWK7 81 aa10.42□□□□□ -0.74
CLCNKA-202ENST00000375692 C20orf203Q8NBC4 194 aa10.41□□□□□ -0.74
CLCNKA-202ENST00000375692 CR1P17927 2039 aa10.41□□□□□ -0.74
CLCNKA-202ENST00000375692 NSUN5P1Q3KNT7 163 aa10.41□□□□□ -0.74
CLCNKA-202ENST00000375692 LINC01356Q8N9X3 169 aa10.41□□□□□ -0.74
CLCNKA-202ENST00000375692 SPXQ9BT56 116 aa10.41□□□□□ -0.74
CLCNKA-202ENST00000375692 VCX2Q9H322 139 aa10.41□□□□□ -0.74
CLCNKA-202ENST00000375692 IGHV3-73A0A0B4J1V6 119 aa10.4□□□□□ -0.74
CLCNKA-202ENST00000375692 BRI3O95415 125 aa10.4□□□□□ -0.74
CLCNKA-202ENST00000375692 Q1RN00 199 aa10.4□□□□□ -0.74
CLCNKA-202ENST00000375692 RNF183Q96D59 192 aa10.4□□□□□ -0.74
CLCNKA-202ENST00000375692 MYO9AB2RTY4 2548 aa10.4□□□□□ -0.74
CLCNKA-202ENST00000375692 IGLV4-3A0A075B6K6 122 aa10.4□□□□□ -0.74
CLCNKA-202ENST00000375692 GATA3P23771 443 aa10.4□□□□□ -0.74
CLCNKA-202ENST00000375692 CEMP1Q6PRD7 247 aaPredicted RBP10.4□□□□□ -0.74
CLCNKA-202ENST00000375692 LRRC75A-AS1Q8N1F1 130 aa10.4□□□□□ -0.74
CLCNKA-202ENST00000375692 A0A0J9YX75 114 aa10.39□□□□□ -0.75
CLCNKA-202ENST00000375692 IGHV4-31P0DP07 118 aa10.39□□□□□ -0.75
CLCNKA-202ENST00000375692 RHOHQ15669 191 aa10.39□□□□□ -0.75
CLCNKA-202ENST00000375692 RNASE13Q5GAN3 156 aaKnown RBP10.39□□□□□ -0.75
CLCNKA-202ENST00000375692 IGHV1OR15-1A0A075B7D0 117 aa10.39□□□□□ -0.75
CLCNKA-202ENST00000375692 I3L3M4 83 aa10.39□□□□□ -0.75
CLCNKA-202ENST00000375692 HTN1P15515 57 aa10.39□□□□□ -0.75
CLCNKA-202ENST00000375692 A0A0J9YXY3 114 aa10.38□□□□□ -0.75
CLCNKA-202ENST00000375692 K7EMT4 169 aa10.38□□□□□ -0.75
CLCNKA-202ENST00000375692 PROK1P58294 105 aa10.38□□□□□ -0.75
CLCNKA-202ENST00000375692 AKAP9Q99996 3911 aa10.38□□□□□ -0.75
CLCNKA-202ENST00000375692 TRAV8-3A0A0A6YYJ7 113 aa10.38□□□□□ -0.75
CLCNKA-202ENST00000375692 PRSS2P07478 247 aa10.38□□□□□ -0.75
CLCNKA-202ENST00000375692 NTN5Q8WTR8 489 aaPredicted RBP10.38□□□□□ -0.75
CLCNKA-202ENST00000375692 FLNBO75369 2602 aaKnown RBP10.38□□□□□ -0.75
CLCNKA-202ENST00000375692 A0A0B4J2C4 111 aa10.37□□□□□ -0.75
CLCNKA-202ENST00000375692 M0R2P5 195 aa10.37□□□□□ -0.75
CLCNKA-202ENST00000375692 IGHV3-30-3P0DP02 117 aa10.37□□□□□ -0.75
CLCNKA-202ENST00000375692 CFHR3Q02985 330 aa10.37□□□□□ -0.75
CLCNKA-202ENST00000375692 PRM2P04554 102 aa10.37□□□□□ -0.75
CLCNKA-202ENST00000375692 FAM104AQ969W3 186 aa10.37□□□□□ -0.75
CLCNKA-202ENST00000375692 DUX5Q96PT3 197 aa10.37□□□□□ -0.75
CLCNKA-202ENST00000375692 Q9UF83 564 aa10.37□□□□□ -0.75
CLCNKA-202ENST00000375692 A8MZ25 164 aa10.36□□□□□ -0.75
CLCNKA-202ENST00000375692 NPC2P61916 151 aa10.36□□□□□ -0.75
CLCNKA-202ENST00000375692 ADAMTSL4-AS1Q5T5F5 129 aa10.36□□□□□ -0.75
CLCNKA-202ENST00000375692 Q6ZSV7 163 aa10.36□□□□□ -0.75
CLCNKA-202ENST00000375692 SNRPD3P62318 126 aaKnown RBP10.35□□□□□ -0.75
CLCNKA-202ENST00000375692 LINC01620Q4KN68 170 aa10.35□□□□□ -0.75
CLCNKA-202ENST00000375692 TEX49A0A1B0GTD5 131 aa10.35□□□□□ -0.75
CLCNKA-202ENST00000375692 TMEM262E9PQX1 116 aa10.35□□□□□ -0.75
CLCNKA-202ENST00000375692 TRIAP1O43715 76 aa10.35□□□□□ -0.75
CLCNKA-202ENST00000375692 CD28P10747 220 aa10.35□□□□□ -0.75
CLCNKA-202ENST00000375692 ZFAND6Q6FIF0 208 aa10.35□□□□□ -0.75
CLCNKA-202ENST00000375692 LITAFQ99732 161 aa10.35□□□□□ -0.75
CLCNKA-202ENST00000375692 K7EQG2 157 aa10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 CRLF1O75462 422 aa10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 ANAPC13Q9BS18 74 aa10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 TIMM21Q9BVV7 248 aa10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 KNCNA6PVL3 124 aa10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 RBMY1A1P0DJD3 496 aaKnown RBP10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 RBMY1CP0DJD4 496 aa10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 PSMB8P28062 276 aa10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 SYNJ2BPP57105 145 aa10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 RBMY1FQ15415 496 aaKnown RBP10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 ATXN8Q156A1 80 aa10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 TEX29Q8N6K0 151 aa10.34□□□□□ -0.75
CLCNKA-202ENST00000375692 ODF3Q96PU9 254 aa10.33□□□□□ -0.76
CLCNKA-202ENST00000375692 CITED1Q99966 193 aa10.33□□□□□ -0.76
CLCNKA-202ENST00000375692 MTORP42345 2549 aa10.33□□□□□ -0.76
CLCNKA-202ENST00000375692 TRAV4A0A0B4J268 109 aa10.32□□□□□ -0.76
CLCNKA-202ENST00000375692 DEFB112Q30KQ8 113 aa10.32□□□□□ -0.76
CLCNKA-202ENST00000375692 CUBNO60494 3623 aa10.32□□□□□ -0.76
CLCNKA-202ENST00000375692 OTOGQ6ZRI0 2925 aa10.31□□□□□ -0.76
CLCNKA-202ENST00000375692 IGHV4-59P01825 116 aa10.31□□□□□ -0.76
CLCNKA-202ENST00000375692 M0QXV9 152 aa10.31□□□□□ -0.76
CLCNKA-202ENST00000375692 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
CLCNKA-202ENST00000375692 Q6ZSN1 163 aa10.31□□□□□ -0.76
CLCNKA-202ENST00000375692 NDUFA12Q9UI09 145 aa10.31□□□□□ -0.76
CLCNKA-202ENST00000375692 TRBV30A0A0K0K1B3 111 aa10.3□□□□□ -0.76
CLCNKA-202ENST00000375692 NHLRC4P0CG21 123 aaPredicted RBP10.3□□□□□ -0.76
CLCNKA-202ENST00000375692 TRBV10-2A0A0K0K1G8 114 aa10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 NF1P21359 2839 aa10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 TRGV11A0A075B6L2 103 aa10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 IGHV1-58A0A0C4DH39 117 aa10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 IGKV2-29A2NJV5 120 aaPredicted RBP10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 J3QLI3 93 aa10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 SNCGO76070 127 aa10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 DAND5Q8N907 189 aa10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 CLEC2BQ92478 149 aa10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 PYGO1Q9Y3Y4 419 aa10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 TNFRSF18Q9Y5U5 241 aa10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 ICOSQ9Y6W8 199 aa10.29□□□□□ -0.76
CLCNKA-202ENST00000375692 GAGE2BQ13066 116 aa10.28□□□□□ -0.76
CLCNKA-202ENST00000375692 GAGE2EQ4V326 116 aa10.28□□□□□ -0.76
CLCNKA-202ENST00000375692 GAGE2DQ9UEU5 116 aa10.28□□□□□ -0.76
CLCNKA-202ENST00000375692 IGHV3-38A0A0C4DH36 116 aa10.28□□□□□ -0.76
CLCNKA-202ENST00000375692 H7C423 109 aa10.28□□□□□ -0.76
CLCNKA-202ENST00000375692 C2orf82Q6UX34 121 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms