RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 MED13Q9UHV7 2174 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 TMEM61Q8N0U2 210 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 TOMM6Q96B49 74 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 LYRM9A8MSI8 78 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 LINC00205P59089 165 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 RPL18AQ02543 176 aaKnown RBP4.85□□□□□ -1.63
PTPN3-202ENST00000374541 ZNF581Q9P0T4 197 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 G3V4G9 280 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 C4orf48Q5BLP8 95 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 RNF138Q8WVD3 245 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 FGF23Q9GZV9 251 aaPredicted RBP4.85□□□□□ -1.63
PTPN3-202ENST00000374541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.85□□□□□ -1.63
PTPN3-202ENST00000374541 FAM236DA0A1B0GTK5 79 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 IGKV2-29A2NJV5 120 aaPredicted RBP4.85□□□□□ -1.63
PTPN3-202ENST00000374541 FAM236CP0DP71 79 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 C9orf47Q6ZRZ4 202 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 LRCOL1A6NCL2 159 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 NDUFC2-KCTD14E9PQ53 114 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 RS1O15537 224 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 NDUFC1O43677 76 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 KRTAP24-1Q3LI83 254 aa4.85□□□□□ -1.63
PTPN3-202ENST00000374541 FLNBO75369 2602 aaKnown RBP4.84□□□□□ -1.63
PTPN3-202ENST00000374541 IGHV1-58A0A0C4DH39 117 aa4.84□□□□□ -1.63
PTPN3-202ENST00000374541 J3QL48 77 aa4.84□□□□□ -1.63
PTPN3-202ENST00000374541 P0DMU3 169 aa4.84□□□□□ -1.63
PTPN3-202ENST00000374541 FAM231AP0DMU4 169 aa4.84□□□□□ -1.63
PTPN3-202ENST00000374541 FAM231CP0DMU5 169 aa4.84□□□□□ -1.63
PTPN3-202ENST00000374541 TMEM89A2RUT3 159 aa4.84□□□□□ -1.63
PTPN3-202ENST00000374541 DEFB131BA0A096LNP1 70 aa4.84□□□□□ -1.63
PTPN3-202ENST00000374541 A0A0J9YXV3 536 aa4.84□□□□□ -1.63
PTPN3-202ENST00000374541 LECT2O14960 151 aa4.84□□□□□ -1.63
PTPN3-202ENST00000374541 UBE2AP49459 152 aa4.84□□□□□ -1.63
PTPN3-202ENST00000374541 ANKRD39Q53RE8 183 aa4.84□□□□□ -1.63
PTPN3-202ENST00000374541 NOP10Q9NPE3 64 aaKnown RBP4.84□□□□□ -1.63
PTPN3-202ENST00000374541 APRG1Q8IVJ8 170 aa4.84□□□□□ -1.63
PTPN3-202ENST00000374541 IGHV4OR15-8A0A075B7B6 117 aa4.84□□□□□ -1.64
PTPN3-202ENST00000374541 A0A087WW49 117 aa4.84□□□□□ -1.64
PTPN3-202ENST00000374541 C5orf24Q7Z6I8 188 aa4.84□□□□□ -1.64
PTPN3-202ENST00000374541 KIR2DL5BQ8NHK3 375 aa4.84□□□□□ -1.64
PTPN3-202ENST00000374541 LMO4P61968 165 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 C16orf54Q6UWD8 224 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 Q6ZR03 302 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 SPATA12Q7Z6I5 190 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 NPBQ8NG41 125 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 ESM1Q9NQ30 184 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 CRYBG3Q68DQ2 2970 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 IGLV3-1P01715 115 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 UPK3BQ9BT76 320 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 NDUFA7O95182 113 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 CTRLP40313 264 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 CSMD1Q96PZ7 3565 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 COX7BP24311 80 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 FXYD2P54710 66 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 C5orf38Q86SI9 138 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 FANCD2OSQ96PS1 177 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 CELSR2Q9HCU4 2923 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 C20orf173Q96LM9 149 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 B9D2Q9BPU9 175 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 K7EMT4 169 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 GNRH2O43555 120 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 CDSNQ15517 529 aa4.83□□□□□ -1.64
PTPN3-202ENST00000374541 RNASE13Q5GAN3 156 aaKnown RBP4.83□□□□□ -1.64
PTPN3-202ENST00000374541 TRAV10A0A0B4J240 114 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 IGHV4-28A0A0C4DH34 117 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 BPY2O14599 106 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 C14orf177Q52M58 125 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 AJUBAQ96IF1 538 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 TRBV10-1A0A0K0K1A3 114 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 GYPEP15421 78 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 EPG5Q9HCE0 2579 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 WFDC2Q14508 124 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 WDR86Q86TI4 376 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 RNASE8Q8TDE3 154 aaKnown RBP4.82□□□□□ -1.64
PTPN3-202ENST00000374541 TRBV7-3A0A075B6L6 115 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 TRAV26-1A0A087WT03 109 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 USP17L23D6RBM5 183 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 CLPSL2Q6UWE3 100 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 TPSG1Q9NRR2 321 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 CTSZQ9UBR2 303 aa4.82□□□□□ -1.64
PTPN3-202ENST00000374541 NDUFV3P56181 108 aaKnown RBP4.81□□□□□ -1.64
PTPN3-202ENST00000374541 MIAQ16674 131 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 Q6ZQT7 251 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 ODF3L1Q8IXM7 274 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 LINC00482Q8N8I6 264 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 A0A0J9YXY3 114 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 SPAG11BQ08648 103 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 CASC2Q6XLA1 102 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 I3L2K1 104 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 MALRD1Q5VYJ5 2156 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 TACC2O95359 2948 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 IGLV11-55A0A075B6I3 123 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 HIST2H2BDQ6DRA6 164 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 UFSP1Q6NVU6 142 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 C3orf22Q8N5N4 141 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 SPTSSBQ8NFR3 76 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 IMUPQ9GZP8 106 aa4.81□□□□□ -1.64
PTPN3-202ENST00000374541 ANKHD1Q8IWZ3 2542 aaKnown RBP4.8□□□□□ -1.64
PTPN3-202ENST00000374541 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
PTPN3-202ENST00000374541 C20orf203Q8NBC4 194 aa4.8□□□□□ -1.64
PTPN3-202ENST00000374541 RPL39LQ96EH5 51 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms