RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 ZNF727A8MUV8 499 aa11.69□□□□□ -0.54
TRAPPC3-202ENST00000373162 CRPP02741 224 aa11.69□□□□□ -0.54
TRAPPC3-202ENST00000373162 GATD1Q8NB37 220 aa11.69□□□□□ -0.54
TRAPPC3-202ENST00000373162 A0A1B0GUV1 79 aa11.68□□□□□ -0.54
TRAPPC3-202ENST00000373162 FOXA3P55318 350 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC3-202ENST00000373162 GFRA4Q9GZZ7 299 aa11.68□□□□□ -0.54
TRAPPC3-202ENST00000373162 IGLV4-60A0A075B6I1 120 aa11.67□□□□□ -0.54
TRAPPC3-202ENST00000373162 USP17L23D6RBM5 183 aa11.67□□□□□ -0.54
TRAPPC3-202ENST00000373162 KRTAP10-4P60372 401 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC3-202ENST00000373162 FAM74A3Q4VXF1 159 aa11.67□□□□□ -0.54
TRAPPC3-202ENST00000373162 CT83Q5H943 113 aa11.67□□□□□ -0.54
TRAPPC3-202ENST00000373162 SCXQ7RTU7 201 aa11.67□□□□□ -0.54
TRAPPC3-202ENST00000373162 LINC00269Q8N2A0 174 aa11.67□□□□□ -0.54
TRAPPC3-202ENST00000373162 LINC00862A6NCI5 91 aa11.66□□□□□ -0.54
TRAPPC3-202ENST00000373162 FAM229AH3BQW9 127 aa11.66□□□□□ -0.54
TRAPPC3-202ENST00000373162 COMMD7Q86VX2 200 aa11.66□□□□□ -0.54
TRAPPC3-202ENST00000373162 TMEM243Q9BU79 118 aa11.66□□□□□ -0.54
TRAPPC3-202ENST00000373162 PRSS1P07477 247 aa11.65□□□□□ -0.54
TRAPPC3-202ENST00000373162 TWIST1Q15672 202 aa11.65□□□□□ -0.54
TRAPPC3-202ENST00000373162 C14orf177Q52M58 125 aa11.65□□□□□ -0.54
TRAPPC3-202ENST00000373162 UQCC3Q6UW78 93 aa11.65□□□□□ -0.54
TRAPPC3-202ENST00000373162 CLPSL2Q6UWE3 100 aa11.65□□□□□ -0.54
TRAPPC3-202ENST00000373162 LINC01551Q86U37 167 aa11.65□□□□□ -0.54
TRAPPC3-202ENST00000373162 TRAV26-2A0A0B4J265 109 aa11.64□□□□□ -0.55
TRAPPC3-202ENST00000373162 GATCO43716 136 aaKnown RBP11.64□□□□□ -0.55
TRAPPC3-202ENST00000373162 REG3AQ06141 175 aa11.64□□□□□ -0.55
TRAPPC3-202ENST00000373162 TMEM241Q24JQ0 296 aa11.64□□□□□ -0.55
TRAPPC3-202ENST00000373162 CHAC1Q9BUX1 264 aa11.64□□□□□ -0.55
TRAPPC3-202ENST00000373162 A8MWL6 223 aa11.63□□□□□ -0.55
TRAPPC3-202ENST00000373162 HLA-DQA1P01909 254 aa11.63□□□□□ -0.55
TRAPPC3-202ENST00000373162 LINC00528Q8N1L1 170 aa11.63□□□□□ -0.55
TRAPPC3-202ENST00000373162 RPL39LQ96EH5 51 aaKnown RBP11.63□□□□□ -0.55
TRAPPC3-202ENST00000373162 NAT8Q9UHE5 227 aa11.63□□□□□ -0.55
TRAPPC3-202ENST00000373162 CIRBP-AS1Q8TBR5 109 aa11.62□□□□□ -0.55
TRAPPC3-202ENST00000373162 DEFB104AQ8WTQ1 72 aa11.62□□□□□ -0.55
TRAPPC3-202ENST00000373162 RPL23P62829 140 aaKnown RBP11.61□□□□□ -0.55
TRAPPC3-202ENST00000373162 COTL1Q14019 142 aa11.61□□□□□ -0.55
TRAPPC3-202ENST00000373162 C9orf163Q8N9P6 203 aa11.61□□□□□ -0.55
TRAPPC3-202ENST00000373162 TRAV8-4A0A0B4J246 113 aa11.6□□□□□ -0.55
TRAPPC3-202ENST00000373162 TRBV6-5A0A0K0K1A5 114 aa11.6□□□□□ -0.55
TRAPPC3-202ENST00000373162 GAS8-AS1O95177 125 aa11.6□□□□□ -0.55
TRAPPC3-202ENST00000373162 AMTP48728 403 aa11.6□□□□□ -0.55
TRAPPC3-202ENST00000373162 DGAT2L7PQ6IED9 249 aa11.6□□□□□ -0.55
TRAPPC3-202ENST00000373162 OSTCQ9NRP0 149 aa11.6□□□□□ -0.55
TRAPPC3-202ENST00000373162 FAM231BA6NCW3 169 aa11.59□□□□□ -0.55
TRAPPC3-202ENST00000373162 NCR2O95944 276 aa11.59□□□□□ -0.55
TRAPPC3-202ENST00000373162 ADIRFQ15847 76 aa11.59□□□□□ -0.55
TRAPPC3-202ENST00000373162 TSKUQ8WUA8 353 aa11.59□□□□□ -0.55
TRAPPC3-202ENST00000373162 IGLV10-54A0A075B6I4 117 aa11.58□□□□□ -0.56
TRAPPC3-202ENST00000373162 TMEM218A2RU14 115 aa11.58□□□□□ -0.56
TRAPPC3-202ENST00000373162 ISOC2Q96AB3 205 aa11.58□□□□□ -0.56
TRAPPC3-202ENST00000373162 RNF185Q96GF1 192 aa11.58□□□□□ -0.56
TRAPPC3-202ENST00000373162 V9GYV3 84 aa11.58□□□□□ -0.56
TRAPPC3-202ENST00000373162 SDHAF1A6NFY7 115 aa11.57□□□□□ -0.56
TRAPPC3-202ENST00000373162 HIGD1CA8MV81 97 aa11.57□□□□□ -0.56
TRAPPC3-202ENST00000373162 CNBPP62633 177 aaKnown RBP11.57□□□□□ -0.56
TRAPPC3-202ENST00000373162 TMEM191AQ9H0A3 160 aa11.57□□□□□ -0.56
TRAPPC3-202ENST00000373162 PANO1I0J062 215 aa11.56□□□□□ -0.56
TRAPPC3-202ENST00000373162 SLPIP03973 132 aa11.56□□□□□ -0.56
TRAPPC3-202ENST00000373162 PLA2G1BP04054 148 aaKnown RBP11.56□□□□□ -0.56
TRAPPC3-202ENST00000373162 ADCYAP1P18509 176 aa11.56□□□□□ -0.56
TRAPPC3-202ENST00000373162 CLRN3Q8NCR9 226 aa11.56□□□□□ -0.56
TRAPPC3-202ENST00000373162 A0A1B0GUT8 65 aa11.55□□□□□ -0.56
TRAPPC3-202ENST00000373162 F8W036 122 aa11.55□□□□□ -0.56
TRAPPC3-202ENST00000373162 H7C423 109 aa11.55□□□□□ -0.56
TRAPPC3-202ENST00000373162 ESDP10768 282 aa11.55□□□□□ -0.56
TRAPPC3-202ENST00000373162 CIRBPQ14011 172 aaKnown RBP11.55□□□□□ -0.56
TRAPPC3-202ENST00000373162 SDIM1Q6ZPB5 146 aa11.55□□□□□ -0.56
TRAPPC3-202ENST00000373162 RPS10P46783 165 aaKnown RBP11.54□□□□□ -0.56
TRAPPC3-202ENST00000373162 POLR2KP53803 58 aaKnown RBP11.54□□□□□ -0.56
TRAPPC3-202ENST00000373162 PNRC1Q12796 327 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC3-202ENST00000373162 SMIM15Q7Z3B0 74 aa11.54□□□□□ -0.56
TRAPPC3-202ENST00000373162 C15orf56Q8N910 161 aa11.54□□□□□ -0.56
TRAPPC3-202ENST00000373162 SEC11CQ9BY50 192 aa11.54□□□□□ -0.56
TRAPPC3-202ENST00000373162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC3-202ENST00000373162 UBE2L6O14933 153 aa11.53□□□□□ -0.56
TRAPPC3-202ENST00000373162 TSHBP01222 138 aa11.53□□□□□ -0.56
TRAPPC3-202ENST00000373162 RAB4AP20338 218 aa11.53□□□□□ -0.56
TRAPPC3-202ENST00000373162 LRP1Q07954 4544 aaKnown RBP11.53□□□□□ -0.56
TRAPPC3-202ENST00000373162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC3-202ENST00000373162 IGKV2-29A2NJV5 120 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC3-202ENST00000373162 APCSP02743 223 aa11.52□□□□□ -0.57
TRAPPC3-202ENST00000373162 NUP35Q8NFH5 326 aa11.52□□□□□ -0.57
TRAPPC3-202ENST00000373162 TRBV27A0A0K0K1C4 114 aa11.51□□□□□ -0.57
TRAPPC3-202ENST00000373162 I3L3M4 83 aa11.51□□□□□ -0.57
TRAPPC3-202ENST00000373162 FGF6P10767 208 aa11.51□□□□□ -0.57
TRAPPC3-202ENST00000373162 KRTAP29-1A8MX34 341 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC3-202ENST00000373162 C10orf91Q5T1B1 145 aa11.5□□□□□ -0.57
TRAPPC3-202ENST00000373162 AMN1Q8IY45 258 aa11.5□□□□□ -0.57
TRAPPC3-202ENST00000373162 MRAP2Q96G30 205 aa11.5□□□□□ -0.57
TRAPPC3-202ENST00000373162 PKHD1L1Q86WI1 4243 aa11.49□□□□□ -0.57
TRAPPC3-202ENST00000373162 FAT3Q8TDW7 4589 aa11.49□□□□□ -0.57
TRAPPC3-202ENST00000373162 ZNF25P17030 456 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC3-202ENST00000373162 MRPL52Q86TS9 123 aaKnown RBP11.49□□□□□ -0.57
TRAPPC3-202ENST00000373162 NRACQ8N912 160 aa11.49□□□□□ -0.57
TRAPPC3-202ENST00000373162 TMEM242Q9NWH2 141 aa11.49□□□□□ -0.57
TRAPPC3-202ENST00000373162 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
TRAPPC3-202ENST00000373162 hDV102S1A0JD36 115 aa11.48□□□□□ -0.57
TRAPPC3-202ENST00000373162 GAGE12HA6NDE8 117 aa11.48□□□□□ -0.57
TRAPPC3-202ENST00000373162 CHCHD10Q8WYQ3 142 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 214.5 ms