RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 PRSS3P2Q8NHM4 247 aa8.21□□□□□ -1.1
TRAPPC3-201ENST00000373159 GTSF1Q8WW33 167 aa8.21□□□□□ -1.1
TRAPPC3-201ENST00000373159 C19orf71A6NCJ1 209 aa8.2□□□□□ -1.1
TRAPPC3-201ENST00000373159 H2AFB1P0C5Y9 115 aa8.2□□□□□ -1.1
TRAPPC3-201ENST00000373159 AMTP48728 403 aa8.2□□□□□ -1.1
TRAPPC3-201ENST00000373159 PRR3P79522 188 aaKnown RBP8.2□□□□□ -1.1
TRAPPC3-201ENST00000373159 COTL1Q14019 142 aa8.2□□□□□ -1.1
TRAPPC3-201ENST00000373159 MAJINQ3KP22 176 aa8.2□□□□□ -1.1
TRAPPC3-201ENST00000373159 C11orf52Q96A22 123 aa8.2□□□□□ -1.1
TRAPPC3-201ENST00000373159 A0A0J9YXV3 536 aa8.19□□□□□ -1.1
TRAPPC3-201ENST00000373159 TRGC1P0CF51 173 aa8.19□□□□□ -1.1
TRAPPC3-201ENST00000373159 KRTAP10-8P60410 259 aa8.19□□□□□ -1.1
TRAPPC3-201ENST00000373159 ZNF345Q14585 488 aa8.19□□□□□ -1.1
TRAPPC3-201ENST00000373159 STPG4Q8N801 248 aa8.19□□□□□ -1.1
TRAPPC3-201ENST00000373159 IGKV2-24A0A0C4DH68 120 aa8.18□□□□□ -1.1
TRAPPC3-201ENST00000373159 XKRY2A2RUG3 117 aa8.18□□□□□ -1.1
TRAPPC3-201ENST00000373159 NTF3P20783 257 aa8.18□□□□□ -1.1
TRAPPC3-201ENST00000373159 HIGD2BQ4VC39 106 aa8.18□□□□□ -1.1
TRAPPC3-201ENST00000373159 CENPWQ5EE01 88 aa8.18□□□□□ -1.1
TRAPPC3-201ENST00000373159 LYZL1Q6UWQ5 148 aa8.18□□□□□ -1.1
TRAPPC3-201ENST00000373159 C9orf62Q8N4C0 152 aa8.18□□□□□ -1.1
TRAPPC3-201ENST00000373159 SMIM12Q96EX1 92 aa8.18□□□□□ -1.1
TRAPPC3-201ENST00000373159 GVQW2A0A096LPI5 108 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC3-201ENST00000373159 IGKV3OR2-268A0A0C4DH90 116 aa8.17□□□□□ -1.1
TRAPPC3-201ENST00000373159 IFNA1P01562 189 aa8.17□□□□□ -1.1
TRAPPC3-201ENST00000373159 CCL20P78556 96 aa8.17□□□□□ -1.1
TRAPPC3-201ENST00000373159 SPINK6Q6UWN8 80 aa8.17□□□□□ -1.1
TRAPPC3-201ENST00000373159 LYPD6BQ8NI32 183 aa8.17□□□□□ -1.1
TRAPPC3-201ENST00000373159 CHCHD10Q8WYQ3 142 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC3-201ENST00000373159 MANBALQ9NQG1 85 aa8.17□□□□□ -1.1
TRAPPC3-201ENST00000373159 TRAV1-1A0A0B4J248 108 aa8.16□□□□□ -1.1
TRAPPC3-201ENST00000373159 SMLR1H3BR10 107 aa8.16□□□□□ -1.1
TRAPPC3-201ENST00000373159 SRSF9Q13242 221 aaKnown RBP eCLIP8.16□□□□□ -1.1
TRAPPC3-201ENST00000373159 ODF1Q14990 250 aa8.16□□□□□ -1.1
TRAPPC3-201ENST00000373159 BATF3Q9NR55 127 aa8.16□□□□□ -1.1
TRAPPC3-201ENST00000373159 GNG13Q9P2W3 67 aa8.16□□□□□ -1.1
TRAPPC3-201ENST00000373159 LINC00474Q9P2X8 69 aa8.16□□□□□ -1.1
TRAPPC3-201ENST00000373159 A0A096LNI7 61 aa8.15□□□□□ -1.1
TRAPPC3-201ENST00000373159 RAB19A4D1S5 217 aa8.15□□□□□ -1.1
TRAPPC3-201ENST00000373159 HMSDA8MTL9 139 aa8.15□□□□□ -1.1
TRAPPC3-201ENST00000373159 H7C423 109 aa8.15□□□□□ -1.1
TRAPPC3-201ENST00000373159 NCR2O95944 276 aa8.15□□□□□ -1.1
TRAPPC3-201ENST00000373159 GNG4P50150 75 aa8.15□□□□□ -1.1
TRAPPC3-201ENST00000373159 AMMECR1LQ6DCA0 310 aa8.15□□□□□ -1.1
TRAPPC3-201ENST00000373159 REG3GQ6UW15 175 aa8.15□□□□□ -1.1
TRAPPC3-201ENST00000373159 GATD1Q8NB37 220 aa8.15□□□□□ -1.1
TRAPPC3-201ENST00000373159 EIF5AP63241 154 aaKnown RBP8.14□□□□□ -1.11
TRAPPC3-201ENST00000373159 FOXI1Q12951 378 aa8.14□□□□□ -1.11
TRAPPC3-201ENST00000373159 CNFNQ9BYD5 112 aa8.14□□□□□ -1.11
TRAPPC3-201ENST00000373159 BIN3Q9NQY0 253 aa8.14□□□□□ -1.11
TRAPPC3-201ENST00000373159 PKIGQ9Y2B9 76 aa8.14□□□□□ -1.11
TRAPPC3-201ENST00000373159 KANTRA0A1W2PQU2 76 aa8.13□□□□□ -1.11
TRAPPC3-201ENST00000373159 BCL2L11O43521 198 aa8.13□□□□□ -1.11
TRAPPC3-201ENST00000373159 CTRLP40313 264 aa8.13□□□□□ -1.11
TRAPPC3-201ENST00000373159 TWIST1Q15672 202 aa8.13□□□□□ -1.11
TRAPPC3-201ENST00000373159 Q6ZNX1 250 aa8.13□□□□□ -1.11
TRAPPC3-201ENST00000373159 TRBV20OR9-2A0A075B6H5 130 aa8.12□□□□□ -1.11
TRAPPC3-201ENST00000373159 FGF6P10767 208 aa8.12□□□□□ -1.11
TRAPPC3-201ENST00000373159 RNASEKQ6P5S7 137 aaKnown RBP8.12□□□□□ -1.11
TRAPPC3-201ENST00000373159 Q6ZRP5 223 aa8.12□□□□□ -1.11
TRAPPC3-201ENST00000373159 NUDT10Q8NFP7 164 aa8.12□□□□□ -1.11
TRAPPC3-201ENST00000373159 OR5A1Q8NGJ0 315 aa8.12□□□□□ -1.11
TRAPPC3-201ENST00000373159 NUDT11Q96G61 164 aa8.12□□□□□ -1.11
TRAPPC3-201ENST00000373159 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC3-201ENST00000373159 TRAV26-2A0A0B4J265 109 aa8.11□□□□□ -1.11
TRAPPC3-201ENST00000373159 IGKV2-29A2NJV5 120 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC3-201ENST00000373159 PDE6DO43924 150 aa8.11□□□□□ -1.11
TRAPPC3-201ENST00000373159 MEF2BQ02080 365 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC3-201ENST00000373159 MED9Q9NWA0 146 aa8.11□□□□□ -1.11
TRAPPC3-201ENST00000373159 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
TRAPPC3-201ENST00000373159 TEX46H3BTG2 121 aa8.1□□□□□ -1.11
TRAPPC3-201ENST00000373159 APCSP02743 223 aa8.1□□□□□ -1.11
TRAPPC3-201ENST00000373159 ZNF25P17030 456 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC3-201ENST00000373159 TEX261Q6UWH6 196 aa8.1□□□□□ -1.11
TRAPPC3-201ENST00000373159 RPL39LQ96EH5 51 aaKnown RBP8.1□□□□□ -1.11
TRAPPC3-201ENST00000373159 LINC00959A0A1B0GUT2 108 aa8.09□□□□□ -1.11
TRAPPC3-201ENST00000373159 FAM231BA6NCW3 169 aa8.09□□□□□ -1.11
TRAPPC3-201ENST00000373159 SDHAF1A6NFY7 115 aa8.09□□□□□ -1.11
TRAPPC3-201ENST00000373159 XCL1P47992 114 aa8.09□□□□□ -1.11
TRAPPC3-201ENST00000373159 RGS21Q2M5E4 152 aa8.09□□□□□ -1.11
TRAPPC3-201ENST00000373159 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
TRAPPC3-201ENST00000373159 CARD19Q96LW7 228 aa8.09□□□□□ -1.11
TRAPPC3-201ENST00000373159 CCL25O15444 150 aa8.08□□□□□ -1.12
TRAPPC3-201ENST00000373159 SYCNQ0VAF6 134 aa8.08□□□□□ -1.12
TRAPPC3-201ENST00000373159 SMIM15Q7Z3B0 74 aa8.08□□□□□ -1.12
TRAPPC3-201ENST00000373159 TMEM101Q96IK0 257 aa8.08□□□□□ -1.12
TRAPPC3-201ENST00000373159 BTF3L4Q96K17 158 aa8.08□□□□□ -1.12
TRAPPC3-201ENST00000373159 RPP21Q9H633 154 aaKnown RBP8.08□□□□□ -1.12
TRAPPC3-201ENST00000373159 TRBV6-5A0A0K0K1A5 114 aa8.07□□□□□ -1.12
TRAPPC3-201ENST00000373159 I3L3M4 83 aa8.07□□□□□ -1.12
TRAPPC3-201ENST00000373159 ESDP10768 282 aa8.07□□□□□ -1.12
TRAPPC3-201ENST00000373159 PMCHP20382 165 aa8.07□□□□□ -1.12
TRAPPC3-201ENST00000373159 FOXA3P55318 350 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC3-201ENST00000373159 FAM210AQ96ND0 272 aa8.07□□□□□ -1.12
TRAPPC3-201ENST00000373159 ZNF561-AS1K7EIQ3 104 aa8.06□□□□□ -1.12
TRAPPC3-201ENST00000373159 GAS8-AS1O95177 125 aa8.06□□□□□ -1.12
TRAPPC3-201ENST00000373159 PTTG1IPP53801 180 aa8.06□□□□□ -1.12
TRAPPC3-201ENST00000373159 SS18Q15532 418 aa8.06□□□□□ -1.12
TRAPPC3-201ENST00000373159 EIF5AL1Q6IS14 154 aaKnown RBP8.06□□□□□ -1.12
TRAPPC3-201ENST00000373159 CD164L2Q6UWJ8 174 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms