RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 DAZ1Q9NQZ3 744 aaKnown RBP10.14□□□□□ -0.79
USP49-201ENST00000373006 A0A0U1RRA0 63 aa10.14□□□□□ -0.79
USP49-201ENST00000373006 LINC01620Q4KN68 170 aa10.14□□□□□ -0.79
USP49-201ENST00000373006 TRAV8-3A0A0A6YYJ7 113 aa10.14□□□□□ -0.79
USP49-201ENST00000373006 IGHV3-73A0A0B4J1V6 119 aa10.14□□□□□ -0.79
USP49-201ENST00000373006 H3BMM0 161 aa10.14□□□□□ -0.79
USP49-201ENST00000373006 HTN1P15515 57 aa10.14□□□□□ -0.79
USP49-201ENST00000373006 UBE2WQ96B02 151 aa10.14□□□□□ -0.79
USP49-201ENST00000373006 ODF3Q96PU9 254 aa10.14□□□□□ -0.79
USP49-201ENST00000373006 IGHV3-16A0A0C4DH30 117 aa10.13□□□□□ -0.79
USP49-201ENST00000373006 C9orf153Q5TBE3 101 aa10.13□□□□□ -0.79
USP49-201ENST00000373006 TRGV11A0A075B6L2 103 aa10.13□□□□□ -0.79
USP49-201ENST00000373006 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
USP49-201ENST00000373006 TRBV6-5A0A0K0K1A5 114 aa10.13□□□□□ -0.79
USP49-201ENST00000373006 TRIAP1O43715 76 aa10.13□□□□□ -0.79
USP49-201ENST00000373006 C20orf203Q8NBC4 194 aa10.13□□□□□ -0.79
USP49-201ENST00000373006 A0A0B4J2C4 111 aa10.12□□□□□ -0.79
USP49-201ENST00000373006 A8MZ25 164 aa10.12□□□□□ -0.79
USP49-201ENST00000373006 H3BUX3 64 aa10.12□□□□□ -0.79
USP49-201ENST00000373006 ATXN8Q156A1 80 aa10.12□□□□□ -0.79
USP49-201ENST00000373006 SPINK13Q1W4C9 94 aa10.12□□□□□ -0.79
USP49-201ENST00000373006 DCANP1Q8TF63 244 aa10.12□□□□□ -0.79
USP49-201ENST00000373006 USMG5Q96IX5 58 aa10.12□□□□□ -0.79
USP49-201ENST00000373006 PTPN13Q12923 2485 aa10.12□□□□□ -0.79
USP49-201ENST00000373006 IGLV4-3A0A075B6K6 122 aa10.12□□□□□ -0.79
USP49-201ENST00000373006 IGHV3-30-3P0DP02 117 aa10.12□□□□□ -0.79
USP49-201ENST00000373006 IGHV4-38-2P0DP08 117 aa10.12□□□□□ -0.79
USP49-201ENST00000373006 C5orf47Q569G3 176 aa10.12□□□□□ -0.79
USP49-201ENST00000373006 CSDC2Q9Y534 153 aaKnown RBP10.12□□□□□ -0.79
USP49-201ENST00000373006 IGHV1-69P01742 117 aa10.11□□□□□ -0.79
USP49-201ENST00000373006 NSUN5P1Q3KNT7 163 aa10.11□□□□□ -0.79
USP49-201ENST00000373006 ADAMTSL4-AS1Q5T5F5 129 aa10.11□□□□□ -0.79
USP49-201ENST00000373006 CFAP46Q8IYW2 2715 aa10.11□□□□□ -0.79
USP49-201ENST00000373006 C19orf84I3L1E1 186 aa10.11□□□□□ -0.79
USP49-201ENST00000373006 M0R2P5 195 aa10.11□□□□□ -0.79
USP49-201ENST00000373006 C9orf85Q96MD7 179 aa10.11□□□□□ -0.79
USP49-201ENST00000373006 ZNF462Q96JM2 2506 aa10.11□□□□□ -0.79
USP49-201ENST00000373006 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.1□□□□□ -0.79
USP49-201ENST00000373006 UCNP55089 124 aa10.1□□□□□ -0.79
USP49-201ENST00000373006 PRRC2AP48634 2157 aaKnown RBP10.1□□□□□ -0.79
USP49-201ENST00000373006 I3L3M4 83 aa10.1□□□□□ -0.79
USP49-201ENST00000373006 PROK1P58294 105 aa10.1□□□□□ -0.79
USP49-201ENST00000373006 EDA2RQ9HAV5 297 aa10.1□□□□□ -0.79
USP49-201ENST00000373006 IGHG2P01859 326 aa10.1□□□□□ -0.79
USP49-201ENST00000373006 RHOHQ15669 191 aa10.1□□□□□ -0.79
USP49-201ENST00000373006 DAND5Q8N907 189 aa10.1□□□□□ -0.79
USP49-201ENST00000373006 TIMM21Q9BVV7 248 aa10.1□□□□□ -0.79
USP49-201ENST00000373006 CD28P10747 220 aa10.09□□□□□ -0.79
USP49-201ENST00000373006 GNLYP22749 145 aa10.09□□□□□ -0.79
USP49-201ENST00000373006 ABCA12Q86UK0 2595 aa10.09□□□□□ -0.79
USP49-201ENST00000373006 PRM2P04554 102 aa10.08□□□□□ -0.8
USP49-201ENST00000373006 DUX5Q96PT3 197 aa10.08□□□□□ -0.8
USP49-201ENST00000373006 Q9UF83 564 aa10.08□□□□□ -0.8
USP49-201ENST00000373006 WNK1Q9H4A3 2382 aa10.08□□□□□ -0.8
USP49-201ENST00000373006 IGHV1OR15-1A0A075B7D0 117 aa10.08□□□□□ -0.8
USP49-201ENST00000373006 TRBV10-2A0A0K0K1G8 114 aa10.08□□□□□ -0.8
USP49-201ENST00000373006 C10orf99Q6UWK7 81 aa10.08□□□□□ -0.8
USP49-201ENST00000373006 LITAFQ99732 161 aa10.08□□□□□ -0.8
USP49-201ENST00000373006 SONP18583 2426 aaKnown RBP10.07□□□□□ -0.8
USP49-201ENST00000373006 IGHV4-61A0A0C4DH41 118 aa10.07□□□□□ -0.8
USP49-201ENST00000373006 KNCNA6PVL3 124 aa10.07□□□□□ -0.8
USP49-201ENST00000373006 CCDC168Q8NDH2 2452 aa10.07□□□□□ -0.8
USP49-201ENST00000373006 A0A0J9YX75 114 aa10.06□□□□□ -0.8
USP49-201ENST00000373006 TRBV30A0A0K0K1B3 111 aa10.06□□□□□ -0.8
USP49-201ENST00000373006 H7C423 109 aa10.06□□□□□ -0.8
USP49-201ENST00000373006 FAM104AQ969W3 186 aa10.06□□□□□ -0.8
USP49-201ENST00000373006 NDUFA12Q9UI09 145 aa10.06□□□□□ -0.8
USP49-201ENST00000373006 ICOSQ9Y6W8 199 aa10.06□□□□□ -0.8
USP49-201ENST00000373006 TRAV25A0A0B4J276 109 aa10.06□□□□□ -0.8
USP49-201ENST00000373006 IGSF10Q6WRI0 2623 aa10.05□□□□□ -0.8
USP49-201ENST00000373006 IGLV1-40P01703 118 aa10.05□□□□□ -0.8
USP49-201ENST00000373006 SNRPD3P62318 126 aaKnown RBP10.04□□□□□ -0.8
USP49-201ENST00000373006 H3BUA1 57 aa10.04□□□□□ -0.8
USP49-201ENST00000373006 RPL13AP40429 203 aaKnown RBP10.04□□□□□ -0.8
USP49-201ENST00000373006 A6NDX4 124 aa10.04□□□□□ -0.8
USP49-201ENST00000373006 ZNF625Q96I27 306 aaPredicted RBP10.04□□□□□ -0.8
USP49-201ENST00000373006 HERVK_113P63121 156 aa10.03□□□□□ -0.8
USP49-201ENST00000373006 IGHV1-58A0A0C4DH39 117 aa10.03□□□□□ -0.8
USP49-201ENST00000373006 MRPS36P82909 103 aaKnown RBP10.03□□□□□ -0.8
USP49-201ENST00000373006 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.02□□□□□ -0.8
USP49-201ENST00000373006 IGKV2-29A2NJV5 120 aaPredicted RBP10.02□□□□□ -0.8
USP49-201ENST00000373006 K7EMT4 169 aa10.02□□□□□ -0.8
USP49-201ENST00000373006 COX6CP09669 75 aa10.02□□□□□ -0.8
USP49-201ENST00000373006 SMIM9A6NGZ8 99 aa10.02□□□□□ -0.81
USP49-201ENST00000373006 IGHV3-38A0A0C4DH36 116 aa10.02□□□□□ -0.81
USP49-201ENST00000373006 PRB1P04280 392 aa10.02□□□□□ -0.81
USP49-201ENST00000373006 RBMY1A1P0DJD3 496 aaKnown RBP10.02□□□□□ -0.81
USP49-201ENST00000373006 RBMY1CP0DJD4 496 aa10.02□□□□□ -0.81
USP49-201ENST00000373006 RBMY1FQ15415 496 aaKnown RBP10.02□□□□□ -0.81
USP49-201ENST00000373006 NRGNQ92686 78 aa10.02□□□□□ -0.81
USP49-201ENST00000373006 LINC01587Q99440 93 aa10.02□□□□□ -0.81
USP49-201ENST00000373006 SYNJ2BPP57105 145 aa10.01□□□□□ -0.81
USP49-201ENST00000373006 TMEM101Q96IK0 257 aa10.01□□□□□ -0.81
USP49-201ENST00000373006 MIAQ16674 131 aa10.01□□□□□ -0.81
USP49-201ENST00000373006 VSIG2Q96IQ7 327 aa10.01□□□□□ -0.81
USP49-201ENST00000373006 Q6ZSN1 163 aa10□□□□□ -0.81
USP49-201ENST00000373006 FAM19A5Q7Z5A7 132 aaPredicted RBP10□□□□□ -0.81
USP49-201ENST00000373006 MXRA5Q9NR99 2828 aa10□□□□□ -0.81
USP49-201ENST00000373006 NOTCH2Q04721 2471 aa10□□□□□ -0.81
USP49-201ENST00000373006 K7EQG2 157 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms