RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 CHAC1Q9BUX1 264 aa17.04■□□□□ 0.32
SNX21-204ENST00000372542 NOP10Q9NPE3 64 aaKnown RBP17.04■□□□□ 0.32
SNX21-204ENST00000372542 IGLV4-3A0A075B6K6 122 aa17.03■□□□□ 0.32
SNX21-204ENST00000372542 A6NDN8 102 aa17.03■□□□□ 0.32
SNX21-204ENST00000372542 COTL1Q14019 142 aa17.03■□□□□ 0.32
SNX21-204ENST00000372542 NFE4Q86UQ8 179 aa17.03■□□□□ 0.32
SNX21-204ENST00000372542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.03■□□□□ 0.32
SNX21-204ENST00000372542 MAPKAPK5-AS1Q8N8E1 139 aa17.03■□□□□ 0.32
SNX21-204ENST00000372542 OVOL2Q9BRP0 275 aa17.03■□□□□ 0.32
SNX21-204ENST00000372542 PLAC8L1A1L4L8 177 aa17.03■□□□□ 0.32
SNX21-204ENST00000372542 TAX1BP3O14907 124 aa17.03■□□□□ 0.32
SNX21-204ENST00000372542 ZNF479Q96JC4 524 aa17.03■□□□□ 0.32
SNX21-204ENST00000372542 PRADC1Q9BSG0 188 aa17.03■□□□□ 0.32
SNX21-204ENST00000372542 VCX2Q9H322 139 aa17.03■□□□□ 0.32
SNX21-204ENST00000372542 Q9UF83 564 aa17.03■□□□□ 0.32
SNX21-204ENST00000372542 FN1P02751 2386 aaKnown RBP17.02■□□□□ 0.32
SNX21-204ENST00000372542 CHCHD7Q9BUK0 85 aa17.02■□□□□ 0.31
SNX21-204ENST00000372542 SPANXA1Q9NS26 97 aa17.02■□□□□ 0.31
SNX21-204ENST00000372542 MYMXA0A1B0GTQ4 84 aa17.01■□□□□ 0.31
SNX21-204ENST00000372542 K7EQD1 137 aa17■□□□□ 0.31
SNX21-204ENST00000372542 OPRPNQ99935 248 aaPredicted RBP17■□□□□ 0.31
SNX21-204ENST00000372542 NSD1Q96L73 2696 aaPredicted RBP17■□□□□ 0.31
SNX21-204ENST00000372542 RPL36AP83881 106 aaKnown RBP17■□□□□ 0.31
SNX21-204ENST00000372542 TAL2Q16559 108 aa17■□□□□ 0.31
SNX21-204ENST00000372542 RPL36ALQ969Q0 106 aaKnown RBP17■□□□□ 0.31
SNX21-204ENST00000372542 C2CD3Q4AC94 2353 aa17■□□□□ 0.31
SNX21-204ENST00000372542 TRBV7-3A0A075B6L6 115 aa16.99■□□□□ 0.31
SNX21-204ENST00000372542 EMP1P54849 157 aa16.98■□□□□ 0.31
SNX21-204ENST00000372542 ZNRF2Q8NHG8 242 aa16.98■□□□□ 0.31
SNX21-204ENST00000372542 AMELXQ99217 191 aa16.98■□□□□ 0.31
SNX21-204ENST00000372542 PHLDA1Q8WV24 401 aaPredicted RBP16.98■□□□□ 0.31
SNX21-204ENST00000372542 TMEM170BQ5T4T1 132 aa16.97■□□□□ 0.31
SNX21-204ENST00000372542 Q6ZVH6 145 aa16.96■□□□□ 0.31
SNX21-204ENST00000372542 UBE2D4Q9Y2X8 147 aa16.96■□□□□ 0.31
SNX21-204ENST00000372542 TRGV2A0A075B6R0 118 aa16.96■□□□□ 0.3
SNX21-204ENST00000372542 IGHV3-38A0A0C4DH36 116 aa16.96■□□□□ 0.3
SNX21-204ENST00000372542 DAZ4Q86SG3 579 aaKnown RBP16.96■□□□□ 0.3
SNX21-204ENST00000372542 DAZ3Q9NR90 486 aaKnown RBP16.96■□□□□ 0.3
SNX21-204ENST00000372542 GAGE12BA1L429 117 aa16.95■□□□□ 0.3
SNX21-204ENST00000372542 H3BRM9 83 aa16.95■□□□□ 0.3
SNX21-204ENST00000372542 GAGE7O76087 117 aa16.95■□□□□ 0.3
SNX21-204ENST00000372542 GAGE12FP0CL80 117 aa16.95■□□□□ 0.3
SNX21-204ENST00000372542 GAGE12GP0CL81 117 aa16.95■□□□□ 0.3
SNX21-204ENST00000372542 GAGE12IP0CL82 117 aa16.95■□□□□ 0.3
SNX21-204ENST00000372542 GCSHP23434 173 aa16.94■□□□□ 0.3
SNX21-204ENST00000372542 TIMM21Q9BVV7 248 aa16.94■□□□□ 0.3
SNX21-204ENST00000372542 TM2D2Q9BX73 214 aa16.94■□□□□ 0.3
SNX21-204ENST00000372542 ZNF815PA8K554 130 aa16.93■□□□□ 0.3
SNX21-204ENST00000372542 CEND1Q8N111 149 aa16.93■□□□□ 0.3
SNX21-204ENST00000372542 SLC25A29Q8N8R3 303 aa16.93■□□□□ 0.3
SNX21-204ENST00000372542 FAM104AQ969W3 186 aa16.93■□□□□ 0.3
SNX21-204ENST00000372542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.92■□□□□ 0.3
SNX21-204ENST00000372542 TRBV6-4A0A1B0GX49 114 aa16.92■□□□□ 0.3
SNX21-204ENST00000372542 IGKV2-29A2NJV5 120 aaPredicted RBP16.92■□□□□ 0.3
SNX21-204ENST00000372542 SPATA3Q8NHX4 192 aa16.92■□□□□ 0.3
SNX21-204ENST00000372542 HIVEP1P15822 2718 aa16.92■□□□□ 0.3
SNX21-204ENST00000372542 SMIM9A6NGZ8 99 aa16.91■□□□□ 0.3
SNX21-204ENST00000372542 UBE2D3P61077 147 aa16.91■□□□□ 0.3
SNX21-204ENST00000372542 UBE2D2P62837 147 aa16.91■□□□□ 0.3
SNX21-204ENST00000372542 TMEM223A0PJW6 202 aa16.91■□□□□ 0.3
SNX21-204ENST00000372542 ZNF22P17026 224 aaPredicted RBP16.91■□□□□ 0.3
SNX21-204ENST00000372542 MRPS36P82909 103 aaKnown RBP16.91■□□□□ 0.3
SNX21-204ENST00000372542 A0A0J9YXV3 536 aa16.9■□□□□ 0.3
SNX21-204ENST00000372542 JMJD1CQ15652 2540 aa16.9■□□□□ 0.3
SNX21-204ENST00000372542 CEMP1Q6PRD7 247 aaPredicted RBP16.89■□□□□ 0.29
SNX21-204ENST00000372542 WFDC9Q8NEX5 89 aa16.89■□□□□ 0.29
SNX21-204ENST00000372542 KIR2DL5BQ8NHK3 375 aa16.89■□□□□ 0.29
SNX21-204ENST00000372542 HIST1H4GQ99525 98 aa16.89■□□□□ 0.29
SNX21-204ENST00000372542 PTTG1IPP53801 180 aa16.89■□□□□ 0.29
SNX21-204ENST00000372542 FXYD2P54710 66 aa16.89■□□□□ 0.29
SNX21-204ENST00000372542 SMAGPQ0VAQ4 97 aa16.89■□□□□ 0.29
SNX21-204ENST00000372542 UBE2V1Q13404 147 aa16.89■□□□□ 0.29
SNX21-204ENST00000372542 VAMP3Q15836 100 aa16.89■□□□□ 0.29
SNX21-204ENST00000372542 LEPROTO15243 131 aa16.88■□□□□ 0.29
SNX21-204ENST00000372542 TRGV4A0A0C4DH28 118 aa16.87■□□□□ 0.29
SNX21-204ENST00000372542 GAGE12JA6NER3 117 aa16.87■□□□□ 0.29
SNX21-204ENST00000372542 SMIM13P0DJ93 91 aa16.87■□□□□ 0.29
SNX21-204ENST00000372542 GAGE4Q13068 117 aa16.87■□□□□ 0.29
SNX21-204ENST00000372542 GAGE5Q13069 117 aa16.87■□□□□ 0.29
SNX21-204ENST00000372542 GAGE13Q4V321 117 aa16.87■□□□□ 0.29
SNX21-204ENST00000372542 SCGB1D4Q6XE38 83 aa16.87■□□□□ 0.29
SNX21-204ENST00000372542 C9orf118A6NHY6 69 aa16.86■□□□□ 0.29
SNX21-204ENST00000372542 J3QQQ9 107 aa16.86■□□□□ 0.29
SNX21-204ENST00000372542 LGALS3P17931 250 aaKnown RBP16.86■□□□□ 0.29
SNX21-204ENST00000372542 GTSF1LQ9H1H1 148 aa16.86■□□□□ 0.29
SNX21-204ENST00000372542 TINCRA0A1B0GVN0 87 aa16.86■□□□□ 0.29
SNX21-204ENST00000372542 Q6ZUT4 128 aa16.86■□□□□ 0.29
SNX21-204ENST00000372542 LINC00612Q8N6U2 182 aa16.86■□□□□ 0.29
SNX21-204ENST00000372542 PLEKHB2Q96CS7 222 aa16.86■□□□□ 0.29
SNX21-204ENST00000372542 APOC4P55056 127 aa16.85■□□□□ 0.29
SNX21-204ENST00000372542 DGAT2L7PQ6IED9 249 aa16.85■□□□□ 0.29
SNX21-204ENST00000372542 CSDC2Q9Y534 153 aaKnown RBP16.85■□□□□ 0.29
SNX21-204ENST00000372542 X6R8D5 127 aa16.85■□□□□ 0.29
SNX21-204ENST00000372542 WIPF1O43516 503 aa16.84■□□□□ 0.29
SNX21-204ENST00000372542 FHL2Q14192 279 aa16.84■□□□□ 0.29
SNX21-204ENST00000372542 TSPEAR-AS2P59090 65 aa16.83■□□□□ 0.28
SNX21-204ENST00000372542 RNASE13Q5GAN3 156 aaKnown RBP16.82■□□□□ 0.28
SNX21-204ENST00000372542 NTM-AS1Q6ZSK4 140 aa16.82■□□□□ 0.28
SNX21-204ENST00000372542 SBSPONQ8IVN8 264 aa16.82■□□□□ 0.28
SNX21-204ENST00000372542 NIPBLQ6KC79 2804 aaeCLIP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms