RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 PTTG1IPP53801 180 aa10.22□□□□□ -0.77
LDB3-204ENST00000372066 PMVKQ15126 192 aa10.22□□□□□ -0.77
LDB3-204ENST00000372066 C11orf72Q8NBR9 251 aa10.22□□□□□ -0.77
LDB3-204ENST00000372066 IGKV2D-26A0A0A0MRZ7 120 aa10.21□□□□□ -0.78
LDB3-204ENST00000372066 PRSS29PA6NIE9 313 aa10.21□□□□□ -0.78
LDB3-204ENST00000372066 UFSP1Q6NVU6 142 aa10.21□□□□□ -0.78
LDB3-204ENST00000372066 NEGR1Q7Z3B1 354 aa10.21□□□□□ -0.78
LDB3-204ENST00000372066 TENM3Q9P273 2699 aa10.21□□□□□ -0.78
LDB3-204ENST00000372066 NACAE9PAV3 2078 aa10.2□□□□□ -0.78
LDB3-204ENST00000372066 TAX1BP3O14907 124 aa10.2□□□□□ -0.78
LDB3-204ENST00000372066 NHLRC4P0CG21 123 aaPredicted RBP10.2□□□□□ -0.78
LDB3-204ENST00000372066 TAL2Q16559 108 aa10.2□□□□□ -0.78
LDB3-204ENST00000372066 DNAJC30Q96LL9 226 aa10.2□□□□□ -0.78
LDB3-204ENST00000372066 COL7A1Q02388 2944 aa10.2□□□□□ -0.78
LDB3-204ENST00000372066 E9PLD3 99 aa10.19□□□□□ -0.78
LDB3-204ENST00000372066 TSHBP01222 138 aa10.19□□□□□ -0.78
LDB3-204ENST00000372066 IGLV1-51P01701 117 aa10.19□□□□□ -0.78
LDB3-204ENST00000372066 HERVK_113P61574 105 aa10.19□□□□□ -0.78
LDB3-204ENST00000372066 OR11H2Q8NH07 326 aa10.19□□□□□ -0.78
LDB3-204ENST00000372066 HTN1P15515 57 aa10.18□□□□□ -0.78
LDB3-204ENST00000372066 C20orf203Q8NBC4 194 aa10.18□□□□□ -0.78
LDB3-204ENST00000372066 CHAC1Q9BUX1 264 aa10.18□□□□□ -0.78
LDB3-204ENST00000372066 TRBV25-1A0A075B6N4 114 aa10.18□□□□□ -0.78
LDB3-204ENST00000372066 CCL25O15444 150 aa10.18□□□□□ -0.78
LDB3-204ENST00000372066 RS1O15537 224 aa10.18□□□□□ -0.78
LDB3-204ENST00000372066 SAP30O75446 220 aa10.18□□□□□ -0.78
LDB3-204ENST00000372066 TCTAP57738 103 aa10.18□□□□□ -0.78
LDB3-204ENST00000372066 IL17DQ8TAD2 202 aa10.18□□□□□ -0.78
LDB3-204ENST00000372066 H3BRM9 83 aa10.17□□□□□ -0.78
LDB3-204ENST00000372066 IGHV3-53P01767 116 aa10.17□□□□□ -0.78
LDB3-204ENST00000372066 CRYBA4P53673 196 aa10.17□□□□□ -0.78
LDB3-204ENST00000372066 CFAP126Q5VTH2 177 aa10.17□□□□□ -0.78
LDB3-204ENST00000372066 CST9LQ9H4G1 147 aa10.17□□□□□ -0.78
LDB3-204ENST00000372066 TNFRSF18Q9Y5U5 241 aa10.17□□□□□ -0.78
LDB3-204ENST00000372066 RPL39P62891 51 aaKnown RBP10.16□□□□□ -0.78
LDB3-204ENST00000372066 C9orf66Q5T8R8 295 aa10.16□□□□□ -0.78
LDB3-204ENST00000372066 C1QTNF4Q9BXJ3 329 aa10.16□□□□□ -0.78
LDB3-204ENST00000372066 PYGO1Q9Y3Y4 419 aa10.16□□□□□ -0.78
LDB3-204ENST00000372066 IGLV4-69A0A075B6H9 119 aa10.15□□□□□ -0.78
LDB3-204ENST00000372066 TRAV8-6A0A0B4J262 113 aa10.15□□□□□ -0.78
LDB3-204ENST00000372066 C11orf86A6NJI1 115 aa10.15□□□□□ -0.78
LDB3-204ENST00000372066 C1orf158Q8N1D5 194 aa10.15□□□□□ -0.78
LDB3-204ENST00000372066 TMEM263Q8WUH6 116 aaKnown RBP10.15□□□□□ -0.78
LDB3-204ENST00000372066 XCL2Q9UBD3 114 aa10.15□□□□□ -0.78
LDB3-204ENST00000372066 MYMXA0A1B0GTQ4 84 aa10.14□□□□□ -0.79
LDB3-204ENST00000372066 P0DMU3 169 aa10.14□□□□□ -0.79
LDB3-204ENST00000372066 FAM231AP0DMU4 169 aa10.14□□□□□ -0.79
LDB3-204ENST00000372066 FAM231CP0DMU5 169 aa10.14□□□□□ -0.79
LDB3-204ENST00000372066 NFE4Q86UQ8 179 aa10.14□□□□□ -0.79
LDB3-204ENST00000372066 TM2D2Q9BX73 214 aa10.14□□□□□ -0.79
LDB3-204ENST00000372066 VAMP3Q15836 100 aa10.14□□□□□ -0.79
LDB3-204ENST00000372066 RNASE8Q8TDE3 154 aaKnown RBP10.14□□□□□ -0.79
LDB3-204ENST00000372066 PRADC1Q9BSG0 188 aa10.14□□□□□ -0.79
LDB3-204ENST00000372066 CEND1Q8N111 149 aa10.13□□□□□ -0.79
LDB3-204ENST00000372066 OR4C5Q8NGB2 326 aa10.13□□□□□ -0.79
LDB3-204ENST00000372066 MRPL16Q9NX20 251 aaKnown RBP10.13□□□□□ -0.79
LDB3-204ENST00000372066 C9orf118A6NHY6 69 aa10.12□□□□□ -0.79
LDB3-204ENST00000372066 C3orf84H3BNL1 204 aa10.12□□□□□ -0.79
LDB3-204ENST00000372066 CIDEAO60543 219 aa10.12□□□□□ -0.79
LDB3-204ENST00000372066 MAPKAPK5-AS1Q8N8E1 139 aa10.12□□□□□ -0.79
LDB3-204ENST00000372066 TTTY13Q9BZ97 58 aa10.12□□□□□ -0.79
LDB3-204ENST00000372066 SPANXA1Q9NS26 97 aa10.12□□□□□ -0.79
LDB3-204ENST00000372066 GCSHP23434 173 aa10.11□□□□□ -0.79
LDB3-204ENST00000372066 Q6ZVH6 145 aa10.11□□□□□ -0.79
LDB3-204ENST00000372066 C16orf74Q96GX8 76 aa10.11□□□□□ -0.79
LDB3-204ENST00000372066 C19orf73Q9NVV2 129 aa10.11□□□□□ -0.79
LDB3-204ENST00000372066 IGLV4-3A0A075B6K6 122 aa10.1□□□□□ -0.79
LDB3-204ENST00000372066 IGHV3-73A0A0B4J1V6 119 aa10.1□□□□□ -0.79
LDB3-204ENST00000372066 TRAV4A0A0B4J268 109 aa10.1□□□□□ -0.79
LDB3-204ENST00000372066 TRBV10-1A0A0K0K1A3 114 aa10.1□□□□□ -0.79
LDB3-204ENST00000372066 AZU1P20160 251 aa10.1□□□□□ -0.79
LDB3-204ENST00000372066 DAZ2Q13117 558 aaKnown RBP10.1□□□□□ -0.79
LDB3-204ENST00000372066 VCX2Q9H322 139 aa10.1□□□□□ -0.79
LDB3-204ENST00000372066 PRM2P04554 102 aa10.09□□□□□ -0.79
LDB3-204ENST00000372066 SMIM13P0DJ93 91 aa10.09□□□□□ -0.79
LDB3-204ENST00000372066 ZNF815PA8K554 130 aa10.09□□□□□ -0.79
LDB3-204ENST00000372066 INSL3P51460 131 aa10.09□□□□□ -0.79
LDB3-204ENST00000372066 COTL1Q14019 142 aa10.09□□□□□ -0.79
LDB3-204ENST00000372066 AMELXQ99217 191 aa10.09□□□□□ -0.79
LDB3-204ENST00000372066 TRBV7-3A0A075B6L6 115 aa10.08□□□□□ -0.8
LDB3-204ENST00000372066 IGHV3OR16-12A0A075B7B8 117 aa10.08□□□□□ -0.8
LDB3-204ENST00000372066 TRGV1A0A0A0MS02 117 aa10.08□□□□□ -0.8
LDB3-204ENST00000372066 FXYD2P54710 66 aa10.08□□□□□ -0.8
LDB3-204ENST00000372066 RBX1P62877 108 aa10.08□□□□□ -0.8
LDB3-204ENST00000372066 TMEM170BQ5T4T1 132 aa10.08□□□□□ -0.8
LDB3-204ENST00000372066 HIST1H4GQ99525 98 aa10.08□□□□□ -0.8
LDB3-204ENST00000372066 TIMM21Q9BVV7 248 aa10.08□□□□□ -0.8
LDB3-204ENST00000372066 Q6ZSN1 163 aa10.07□□□□□ -0.8
LDB3-204ENST00000372066 GTF2H5Q6ZYL4 71 aa10.07□□□□□ -0.8
LDB3-204ENST00000372066 ZNRF2Q8NHG8 242 aa10.07□□□□□ -0.8
LDB3-204ENST00000372066 CHCHD7Q9BUK0 85 aa10.07□□□□□ -0.8
LDB3-204ENST00000372066 GIG44P09565 113 aaPredicted RBP10.06□□□□□ -0.8
LDB3-204ENST00000372066 RPL36AP83881 106 aaKnown RBP10.06□□□□□ -0.8
LDB3-204ENST00000372066 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
LDB3-204ENST00000372066 SBSPONQ8IVN8 264 aa10.06□□□□□ -0.8
LDB3-204ENST00000372066 MUC7Q8TAX7 377 aa10.06□□□□□ -0.8
LDB3-204ENST00000372066 DEFB104AQ8WTQ1 72 aa10.06□□□□□ -0.8
LDB3-204ENST00000372066 RPL36ALQ969Q0 106 aaKnown RBP10.06□□□□□ -0.8
LDB3-204ENST00000372066 TMEM238LA0A1B0GVL6 79 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 TMEM223A0PJW6 202 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms