RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 UBE2D2P62837 147 aa18.58■□□□□ 0.56
ATPAF1-202ENST00000371937 LGALS9CQ6DKI2 356 aa18.58■□□□□ 0.56
ATPAF1-202ENST00000371937 C20orf203Q8NBC4 194 aa18.58■□□□□ 0.56
ATPAF1-202ENST00000371937 PHLDA1Q8WV24 401 aaPredicted RBP18.58■□□□□ 0.56
ATPAF1-202ENST00000371937 CELA1Q9UNI1 258 aa18.58■□□□□ 0.56
ATPAF1-202ENST00000371937 GAGE12JA6NER3 117 aa18.57■□□□□ 0.56
ATPAF1-202ENST00000371937 GAGE1Q13065 139 aa18.57■□□□□ 0.56
ATPAF1-202ENST00000371937 GAGE4Q13068 117 aa18.57■□□□□ 0.56
ATPAF1-202ENST00000371937 GAGE5Q13069 117 aa18.57■□□□□ 0.56
ATPAF1-202ENST00000371937 GAGE13Q4V321 117 aa18.57■□□□□ 0.56
ATPAF1-202ENST00000371937 Q6ZN92 141 aa18.57■□□□□ 0.56
ATPAF1-202ENST00000371937 IGHV3-38A0A0C4DH36 116 aa18.56■□□□□ 0.56
ATPAF1-202ENST00000371937 VAMP8Q9BV40 100 aa18.56■□□□□ 0.56
ATPAF1-202ENST00000371937 PRO0255Q9UI72 69 aa18.56■□□□□ 0.56
ATPAF1-202ENST00000371937 RPL39P62891 51 aaKnown RBP18.55■□□□□ 0.56
ATPAF1-202ENST00000371937 DEFB121Q5J5C9 76 aa18.55■□□□□ 0.56
ATPAF1-202ENST00000371937 ZMAT4Q9H898 229 aa18.55■□□□□ 0.56
ATPAF1-202ENST00000371937 ATP5G1P05496 136 aa18.54■□□□□ 0.56
ATPAF1-202ENST00000371937 SBSPONQ8IVN8 264 aa18.54■□□□□ 0.56
ATPAF1-202ENST00000371937 TMEM141Q96I45 108 aa18.54■□□□□ 0.56
ATPAF1-202ENST00000371937 IGIPA6NJ69 53 aa18.53■□□□□ 0.56
ATPAF1-202ENST00000371937 TIMM17AQ99595 171 aa18.53■□□□□ 0.56
ATPAF1-202ENST00000371937 C11orf68Q9H3H3 251 aaKnown RBP18.53■□□□□ 0.56
ATPAF1-202ENST00000371937 CRYBA4P53673 196 aa18.53■□□□□ 0.56
ATPAF1-202ENST00000371937 ATOH7Q8N100 152 aa18.53■□□□□ 0.56
ATPAF1-202ENST00000371937 LOC100131303A0A0U1RQF7 123 aa18.51■□□□□ 0.55
ATPAF1-202ENST00000371937 PMCHL2Q9BQD1 86 aa18.51■□□□□ 0.55
ATPAF1-202ENST00000371937 ZNF664Q8N3J9 261 aa18.51■□□□□ 0.55
ATPAF1-202ENST00000371937 SPATA25Q9BR10 227 aa18.51■□□□□ 0.55
ATPAF1-202ENST00000371937 CHCHD7Q9BUK0 85 aa18.51■□□□□ 0.55
ATPAF1-202ENST00000371937 TRAV12-1A0A0B4J245 112 aa18.5■□□□□ 0.55
ATPAF1-202ENST00000371937 ODF1Q14990 250 aa18.5■□□□□ 0.55
ATPAF1-202ENST00000371937 TRAV9-2A0A087WT02 112 aa18.49■□□□□ 0.55
ATPAF1-202ENST00000371937 PAM16Q9Y3D7 125 aa18.49■□□□□ 0.55
ATPAF1-202ENST00000371937 BAALCQ8WXS3 180 aa18.49■□□□□ 0.55
ATPAF1-202ENST00000371937 GTSF1LQ9H1H1 148 aa18.49■□□□□ 0.55
ATPAF1-202ENST00000371937 A0A087WX48 190 aa18.48■□□□□ 0.55
ATPAF1-202ENST00000371937 PAX4O43316 350 aa18.48■□□□□ 0.55
ATPAF1-202ENST00000371937 LINC00694P0DN24 101 aa18.48■□□□□ 0.55
ATPAF1-202ENST00000371937 PKIAP61925 76 aa18.48■□□□□ 0.55
ATPAF1-202ENST00000371937 GYPEP15421 78 aa18.47■□□□□ 0.55
ATPAF1-202ENST00000371937 TM2D3Q9BRN9 247 aa18.47■□□□□ 0.55
ATPAF1-202ENST00000371937 PYGO1Q9Y3Y4 419 aa18.47■□□□□ 0.55
ATPAF1-202ENST00000371937 TSTD3H0UI37 97 aa18.46■□□□□ 0.55
ATPAF1-202ENST00000371937 PCP4L1A6NKN8 68 aa18.46■□□□□ 0.55
ATPAF1-202ENST00000371937 HSBP1L1C9JCN9 74 aa18.45■□□□□ 0.54
ATPAF1-202ENST00000371937 F5H768 121 aa18.44■□□□□ 0.54
ATPAF1-202ENST00000371937 NPSP0C0P6 89 aa18.44■□□□□ 0.54
ATPAF1-202ENST00000371937 C12orf74Q32Q52 190 aa18.44■□□□□ 0.54
ATPAF1-202ENST00000371937 SPATA45Q537H7 98 aa18.44■□□□□ 0.54
ATPAF1-202ENST00000371937 PAPPA-AS1Q5QFB9 102 aa18.44■□□□□ 0.54
ATPAF1-202ENST00000371937 MRAPQ8TCY5 172 aa18.44■□□□□ 0.54
ATPAF1-202ENST00000371937 TMEM97Q5BJF2 176 aa18.44■□□□□ 0.54
ATPAF1-202ENST00000371937 NTM-AS1Q6ZSK4 140 aa18.44■□□□□ 0.54
ATPAF1-202ENST00000371937 SPANXA1Q9NS26 97 aa18.44■□□□□ 0.54
ATPAF1-202ENST00000371937 PMVKQ15126 192 aa18.43■□□□□ 0.54
ATPAF1-202ENST00000371937 PRO1933Q9H354 126 aa18.43■□□□□ 0.54
ATPAF1-202ENST00000371937 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 A0A0J9YWU9 116 aa18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 IGKV2-29A2NJV5 120 aaPredicted RBP18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 DPM2O94777 84 aa18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 MAJINQ3KP22 176 aa18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 KRTAP21-3Q3LHN1 58 aa18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 MRPL35Q9NZE8 188 aaKnown RBP18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 PRSS29PA6NIE9 313 aa18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 F8VRH5 84 aa18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 HTN3P15516 51 aa18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 ATP6V0E2Q8NHE4 81 aa18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 VSIG2Q96IQ7 327 aa18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 CHTOPQ9Y3Y2 248 aaKnown RBP18.42■□□□□ 0.54
ATPAF1-202ENST00000371937 IGKCP01834 107 aa18.41■□□□□ 0.54
ATPAF1-202ENST00000371937 UBE2D4Q9Y2X8 147 aa18.41■□□□□ 0.54
ATPAF1-202ENST00000371937 TRBV25-1A0A075B6N4 114 aa18.4■□□□□ 0.54
ATPAF1-202ENST00000371937 PLNP26678 52 aa18.4■□□□□ 0.54
ATPAF1-202ENST00000371937 SMAGPQ0VAQ4 97 aa18.4■□□□□ 0.54
ATPAF1-202ENST00000371937 TRAV26-1A0A087WT03 109 aa18.39■□□□□ 0.54
ATPAF1-202ENST00000371937 hDV102S1A0JD36 115 aa18.39■□□□□ 0.54
ATPAF1-202ENST00000371937 TIMM21Q9BVV7 248 aa18.39■□□□□ 0.54
ATPAF1-202ENST00000371937 CST9LQ9H4G1 147 aa18.39■□□□□ 0.54
ATPAF1-202ENST00000371937 IGLV4-3A0A075B6K6 122 aa18.39■□□□□ 0.53
ATPAF1-202ENST00000371937 A0A0J9YY99 117 aa18.39■□□□□ 0.53
ATPAF1-202ENST00000371937 TMEM243Q9BU79 118 aa18.39■□□□□ 0.53
ATPAF1-202ENST00000371937 VCX2Q9H322 139 aa18.39■□□□□ 0.53
ATPAF1-202ENST00000371937 OPRPNQ99935 248 aaPredicted RBP18.38■□□□□ 0.53
ATPAF1-202ENST00000371937 TRBV6-8A0A0A6YYG3 113 aa18.37■□□□□ 0.53
ATPAF1-202ENST00000371937 H7C423 109 aa18.37■□□□□ 0.53
ATPAF1-202ENST00000371937 UBE2L6O14933 153 aa18.36■□□□□ 0.53
ATPAF1-202ENST00000371937 DGAT2L7PQ6IED9 249 aa18.36■□□□□ 0.53
ATPAF1-202ENST00000371937 CEMP1Q6PRD7 247 aaPredicted RBP18.36■□□□□ 0.53
ATPAF1-202ENST00000371937 C11orf45Q8TAV5 145 aa18.36■□□□□ 0.53
ATPAF1-202ENST00000371937 TENM3Q9P273 2699 aa18.35■□□□□ 0.53
ATPAF1-202ENST00000371937 MRPL52Q86TS9 123 aaKnown RBP18.35■□□□□ 0.53
ATPAF1-202ENST00000371937 CSDC2Q9Y534 153 aaKnown RBP18.35■□□□□ 0.53
ATPAF1-202ENST00000371937 MRPL23Q16540 153 aaKnown RBP18.34■□□□□ 0.53
ATPAF1-202ENST00000371937 FGF6P10767 208 aa18.33■□□□□ 0.53
ATPAF1-202ENST00000371937 MRPS36P82909 103 aaKnown RBP18.33■□□□□ 0.53
ATPAF1-202ENST00000371937 ZC2HC1BQ5TFG8 222 aa18.33■□□□□ 0.53
ATPAF1-202ENST00000371937 Q6ZTC4 211 aa18.33■□□□□ 0.53
ATPAF1-202ENST00000371937 SH2D6Q7Z4S9 175 aa18.33■□□□□ 0.53
ATPAF1-202ENST00000371937 AMELXQ99217 191 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms