RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 CLUHP3Q96NS8 147 aa14.44□□□□□ -0.1
LHX3-202ENST00000371748 SIGMAR1Q99720 223 aa14.44□□□□□ -0.1
LHX3-202ENST00000371748 TP53TG1Q9Y2A0 90 aa14.44□□□□□ -0.1
LHX3-202ENST00000371748 IGHV3OR16-12A0A075B7B8 117 aa14.43□□□□□ -0.1
LHX3-202ENST00000371748 GAGE12HA6NDE8 117 aa14.43□□□□□ -0.1
LHX3-202ENST00000371748 GAGE13Q4V321 117 aa14.42□□□□□ -0.1
LHX3-202ENST00000371748 JMJD1CQ15652 2540 aa14.42□□□□□ -0.1
LHX3-202ENST00000371748 IGLV1-51P01701 117 aa14.42□□□□□ -0.1
LHX3-202ENST00000371748 RPL39P62891 51 aaKnown RBP14.42□□□□□ -0.1
LHX3-202ENST00000371748 WFDC10AQ9H1F0 79 aa14.42□□□□□ -0.1
LHX3-202ENST00000371748 LINC00467Q9BRT7 94 aa14.41□□□□□ -0.1
LHX3-202ENST00000371748 PRADC1Q9BSG0 188 aa14.41□□□□□ -0.1
LHX3-202ENST00000371748 J3QR89 54 aa14.41□□□□□ -0.1
LHX3-202ENST00000371748 SMAGPQ0VAQ4 97 aa14.41□□□□□ -0.1
LHX3-202ENST00000371748 C1orf158Q8N1D5 194 aa14.41□□□□□ -0.1
LHX3-202ENST00000371748 PRSS29PA6NIE9 313 aa14.4□□□□□ -0.1
LHX3-202ENST00000371748 P0DMU3 169 aa14.4□□□□□ -0.1
LHX3-202ENST00000371748 FAM231AP0DMU4 169 aa14.4□□□□□ -0.1
LHX3-202ENST00000371748 FAM231CP0DMU5 169 aa14.4□□□□□ -0.1
LHX3-202ENST00000371748 SPATA25Q9BR10 227 aa14.4□□□□□ -0.1
LHX3-202ENST00000371748 MRPL16Q9NX20 251 aaKnown RBP14.4□□□□□ -0.1
LHX3-202ENST00000371748 A8MWV9 139 aa14.39□□□□□ -0.11
LHX3-202ENST00000371748 SCGB1A1P11684 91 aa14.39□□□□□ -0.11
LHX3-202ENST00000371748 TSHBP01222 138 aa14.39□□□□□ -0.11
LHX3-202ENST00000371748 INSL3P51460 131 aa14.39□□□□□ -0.11
LHX3-202ENST00000371748 NSD1Q96L73 2696 aaPredicted RBP14.38□□□□□ -0.11
LHX3-202ENST00000371748 CFAP126Q5VTH2 177 aa14.38□□□□□ -0.11
LHX3-202ENST00000371748 PGPEP1Q9NXJ5 209 aa14.38□□□□□ -0.11
LHX3-202ENST00000371748 IGIPA6NJ69 53 aa14.37□□□□□ -0.11
LHX3-202ENST00000371748 ZNF815PA8K554 130 aa14.37□□□□□ -0.11
LHX3-202ENST00000371748 NDUFA11Q86Y39 141 aa14.37□□□□□ -0.11
LHX3-202ENST00000371748 PLEKHB2Q96CS7 222 aa14.37□□□□□ -0.11
LHX3-202ENST00000371748 Q6ZSN1 163 aa14.37□□□□□ -0.11
LHX3-202ENST00000371748 SPXQ9BT56 116 aa14.37□□□□□ -0.11
LHX3-202ENST00000371748 NOTCH3Q9UM47 2321 aa14.36□□□□□ -0.11
LHX3-202ENST00000371748 PIK3CD-AS1Q5SR53 167 aa14.36□□□□□ -0.11
LHX3-202ENST00000371748 PTH2Q96A98 100 aa14.36□□□□□ -0.11
LHX3-202ENST00000371748 Q9UF83 564 aa14.36□□□□□ -0.11
LHX3-202ENST00000371748 C2CD3Q4AC94 2353 aa14.36□□□□□ -0.11
LHX3-202ENST00000371748 FN1P02751 2386 aaKnown RBP14.36□□□□□ -0.11
LHX3-202ENST00000371748 I3L3M4 83 aa14.36□□□□□ -0.11
LHX3-202ENST00000371748 BEAN1Q3B7T3 259 aa14.36□□□□□ -0.11
LHX3-202ENST00000371748 C19orf73Q9NVV2 129 aa14.36□□□□□ -0.11
LHX3-202ENST00000371748 CIDEAO60543 219 aa14.35□□□□□ -0.11
LHX3-202ENST00000371748 PF4P02776 101 aa14.35□□□□□ -0.11
LHX3-202ENST00000371748 UBE2D1P51668 147 aa14.35□□□□□ -0.11
LHX3-202ENST00000371748 RPL35AP18077 110 aaKnown RBP14.34□□□□□ -0.11
LHX3-202ENST00000371748 CMC4P56277 68 aaPredicted RBP14.34□□□□□ -0.11
LHX3-202ENST00000371748 SCGB1D4Q6XE38 83 aa14.34□□□□□ -0.11
LHX3-202ENST00000371748 EDA2RQ9HAV5 297 aa14.34□□□□□ -0.11
LHX3-202ENST00000371748 HIVEP1P15822 2718 aa14.34□□□□□ -0.11
LHX3-202ENST00000371748 LINC01549A6NIU2 74 aa14.33□□□□□ -0.11
LHX3-202ENST00000371748 GIG44P09565 113 aaPredicted RBP14.33□□□□□ -0.11
LHX3-202ENST00000371748 RHOHQ15669 191 aa14.33□□□□□ -0.11
LHX3-202ENST00000371748 IGLV4-69A0A075B6H9 119 aa14.33□□□□□ -0.12
LHX3-202ENST00000371748 SMCPP49901 116 aaPredicted RBP14.33□□□□□ -0.12
LHX3-202ENST00000371748 TIMM17AQ99595 171 aa14.33□□□□□ -0.12
LHX3-202ENST00000371748 TMEM238LA0A1B0GVL6 79 aa14.32□□□□□ -0.12
LHX3-202ENST00000371748 A6NJY4 79 aa14.32□□□□□ -0.12
LHX3-202ENST00000371748 TMEM141Q96I45 108 aa14.32□□□□□ -0.12
LHX3-202ENST00000371748 C11orf86A6NJI1 115 aa14.32□□□□□ -0.12
LHX3-202ENST00000371748 EMP1P54849 157 aa14.32□□□□□ -0.12
LHX3-202ENST00000371748 SRSF9Q13242 221 aaKnown RBP eCLIP14.32□□□□□ -0.12
LHX3-202ENST00000371748 TNFRSF18Q9Y5U5 241 aa14.32□□□□□ -0.12
LHX3-202ENST00000371748 APOMO95445 188 aa14.31□□□□□ -0.12
LHX3-202ENST00000371748 TSPAN13O95857 204 aa14.31□□□□□ -0.12
LHX3-202ENST00000371748 LINC00482Q8N8I6 264 aa14.31□□□□□ -0.12
LHX3-202ENST00000371748 FAM110AQ9BQ89 295 aa14.31□□□□□ -0.12
LHX3-202ENST00000371748 RS1O15537 224 aa14.31□□□□□ -0.12
LHX3-202ENST00000371748 PMVKQ15126 192 aa14.31□□□□□ -0.12
LHX3-202ENST00000371748 IL17DQ8TAD2 202 aa14.31□□□□□ -0.12
LHX3-202ENST00000371748 OPRPNQ99935 248 aaPredicted RBP14.31□□□□□ -0.12
LHX3-202ENST00000371748 TRGV1A0A0A0MS02 117 aa14.3□□□□□ -0.12
LHX3-202ENST00000371748 RHODO00212 210 aa14.3□□□□□ -0.12
LHX3-202ENST00000371748 C20orf203Q8NBC4 194 aa14.3□□□□□ -0.12
LHX3-202ENST00000371748 FOXI1Q12951 378 aa14.3□□□□□ -0.12
LHX3-202ENST00000371748 SFTA2Q6UW10 78 aa14.29□□□□□ -0.12
LHX3-202ENST00000371748 C1QTNF4Q9BXJ3 329 aa14.29□□□□□ -0.12
LHX3-202ENST00000371748 A0A0J9YY99 117 aa14.29□□□□□ -0.12
LHX3-202ENST00000371748 UBE2D3P61077 147 aa14.29□□□□□ -0.12
LHX3-202ENST00000371748 UBE2D2P62837 147 aa14.29□□□□□ -0.12
LHX3-202ENST00000371748 TMEM263Q8WUH6 116 aaKnown RBP14.29□□□□□ -0.12
LHX3-202ENST00000371748 IGHV3-53P01767 116 aa14.28□□□□□ -0.12
LHX3-202ENST00000371748 NFE4Q86UQ8 179 aa14.27□□□□□ -0.12
LHX3-202ENST00000371748 ATP6V0E2Q8NHE4 81 aa14.27□□□□□ -0.12
LHX3-202ENST00000371748 LOC107984156A0A0G2JMH3 177 aa14.27□□□□□ -0.13
LHX3-202ENST00000371748 Q6ZTI0 123 aa14.27□□□□□ -0.13
LHX3-202ENST00000371748 ARL17AQ8IVW1 177 aa14.27□□□□□ -0.13
LHX3-202ENST00000371748 SPATA3Q8NHX4 192 aa14.27□□□□□ -0.13
LHX3-202ENST00000371748 PSMB2P49721 201 aa14.26□□□□□ -0.13
LHX3-202ENST00000371748 PAPPA-AS1Q5QFB9 102 aa14.26□□□□□ -0.13
LHX3-202ENST00000371748 TSPEAR-AS2P59090 65 aa14.26□□□□□ -0.13
LHX3-202ENST00000371748 IGHV3-38A0A0C4DH36 116 aa14.25□□□□□ -0.13
LHX3-202ENST00000371748 HERVK_113P61574 105 aa14.25□□□□□ -0.13
LHX3-202ENST00000371748 SVIPQ8NHG7 77 aa14.25□□□□□ -0.13
LHX3-202ENST00000371748 NOP10Q9NPE3 64 aaKnown RBP14.25□□□□□ -0.13
LHX3-202ENST00000371748 VWFP04275 2813 aa14.25□□□□□ -0.13
LHX3-202ENST00000371748 CRLF1O75462 422 aa14.24□□□□□ -0.13
LHX3-202ENST00000371748 CSNK1G2-AS1Q8NCQ2 148 aa14.24□□□□□ -0.13
LHX3-202ENST00000371748 ZNRF2Q8NHG8 242 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms