RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ETDBQ3ZM63 59 aa11.05□□□□□ -0.64
NDC1-201ENST00000371429 GAGE12HA6NDE8 117 aa11.04□□□□□ -0.64
NDC1-201ENST00000371429 C14orf177Q52M58 125 aa11.04□□□□□ -0.64
NDC1-201ENST00000371429 ZNF295-AS1Q8N0V1 137 aa11.04□□□□□ -0.64
NDC1-201ENST00000371429 TRAV12-1A0A0B4J245 112 aa11.04□□□□□ -0.64
NDC1-201ENST00000371429 COA6Q5JTJ3 125 aaKnown RBP11.04□□□□□ -0.64
NDC1-201ENST00000371429 C15orf53Q8NAA6 179 aa11.04□□□□□ -0.64
NDC1-201ENST00000371429 ORMDL1Q9P0S3 153 aa11.04□□□□□ -0.64
NDC1-201ENST00000371429 LINC01545Q5VT33 79 aa11.03□□□□□ -0.64
NDC1-201ENST00000371429 C18orf65Q6ZTR6 163 aa11.03□□□□□ -0.64
NDC1-201ENST00000371429 GTSF1LQ9H1H1 148 aa11.03□□□□□ -0.64
NDC1-201ENST00000371429 hADV29S1A0JD25 119 aa11.03□□□□□ -0.64
NDC1-201ENST00000371429 CEMP1Q6PRD7 247 aaPredicted RBP11.03□□□□□ -0.64
NDC1-201ENST00000371429 LINC00269Q8N2A0 174 aa11.03□□□□□ -0.64
NDC1-201ENST00000371429 DAND5Q8N907 189 aa11.03□□□□□ -0.64
NDC1-201ENST00000371429 PPDPFLQ8WWR9 84 aa11.03□□□□□ -0.64
NDC1-201ENST00000371429 NUPR1O60356 82 aa11.02□□□□□ -0.65
NDC1-201ENST00000371429 ANKRD39Q53RE8 183 aa11.02□□□□□ -0.65
NDC1-201ENST00000371429 LINC00322Q6ZN03 302 aaPredicted RBP11.02□□□□□ -0.65
NDC1-201ENST00000371429 Q6ZVH6 145 aa11.02□□□□□ -0.65
NDC1-201ENST00000371429 MUSTN1Q8IVN3 82 aa11.02□□□□□ -0.65
NDC1-201ENST00000371429 OPRPNQ99935 248 aaPredicted RBP11.02□□□□□ -0.65
NDC1-201ENST00000371429 DSCAML1Q8TD84 2053 aa11.02□□□□□ -0.65
NDC1-201ENST00000371429 IGKV2-24A0A0C4DH68 120 aa11.02□□□□□ -0.65
NDC1-201ENST00000371429 CRYGDP07320 174 aa11.02□□□□□ -0.65
NDC1-201ENST00000371429 LRP4O75096 1905 aa11.01□□□□□ -0.65
NDC1-201ENST00000371429 REG3AQ06141 175 aa11.01□□□□□ -0.65
NDC1-201ENST00000371429 A0A1W2PPM0 123 aa11.01□□□□□ -0.65
NDC1-201ENST00000371429 A0A1W2PPR1 153 aa11.01□□□□□ -0.65
NDC1-201ENST00000371429 C11orf86A6NJI1 115 aa11.01□□□□□ -0.65
NDC1-201ENST00000371429 FRMD6-AS1P0C7T7 363 aa11.01□□□□□ -0.65
NDC1-201ENST00000371429 HIGD2BQ4VC39 106 aa11.01□□□□□ -0.65
NDC1-201ENST00000371429 GDF5OSQ5U4N7 250 aa11.01□□□□□ -0.65
NDC1-201ENST00000371429 H3BMG7 143 aa11.01□□□□□ -0.65
NDC1-201ENST00000371429 IGLV1-40P01703 118 aa11.01□□□□□ -0.65
NDC1-201ENST00000371429 Q6ZUT4 128 aa11.01□□□□□ -0.65
NDC1-201ENST00000371429 A4D1N5 150 aa11□□□□□ -0.65
NDC1-201ENST00000371429 H0YGX0 51 aa11□□□□□ -0.65
NDC1-201ENST00000371429 BAALC-AS2P0C853 105 aa11□□□□□ -0.65
NDC1-201ENST00000371429 F8W1H4 67 aa11□□□□□ -0.65
NDC1-201ENST00000371429 FUSP35637 526 aaKnown RBP eCLIP11□□□□□ -0.65
NDC1-201ENST00000371429 OXLD1Q5BKU9 147 aa11□□□□□ -0.65
NDC1-201ENST00000371429 NCR3O14931 201 aa10.99□□□□□ -0.65
NDC1-201ENST00000371429 IGLC6P0CF74 106 aa10.99□□□□□ -0.65
NDC1-201ENST00000371429 ZFAND2AQ8N6M9 145 aa10.99□□□□□ -0.65
NDC1-201ENST00000371429 WFDC10AQ9H1F0 79 aa10.99□□□□□ -0.65
NDC1-201ENST00000371429 MTORP42345 2549 aa10.99□□□□□ -0.65
NDC1-201ENST00000371429 EPG5Q9HCE0 2579 aa10.99□□□□□ -0.65
NDC1-201ENST00000371429 TRAV10A0A0B4J240 114 aa10.99□□□□□ -0.65
NDC1-201ENST00000371429 MLST8Q9BVC4 326 aa10.99□□□□□ -0.65
NDC1-201ENST00000371429 K7EP34 96 aa10.99□□□□□ -0.65
NDC1-201ENST00000371429 IGLV2-8P01709 118 aa10.99□□□□□ -0.65
NDC1-201ENST00000371429 KIAA1549Q9HCM3 1950 aa10.98□□□□□ -0.65
NDC1-201ENST00000371429 C4orf48Q5BLP8 95 aa10.98□□□□□ -0.65
NDC1-201ENST00000371429 IGHV4-28A0A0C4DH34 117 aa10.98□□□□□ -0.65
NDC1-201ENST00000371429 NDUFA7O95182 113 aa10.98□□□□□ -0.65
NDC1-201ENST00000371429 PRB2P02812 416 aaPredicted RBP10.98□□□□□ -0.65
NDC1-201ENST00000371429 MIR7-3HGQ8N6C7 128 aa10.98□□□□□ -0.65
NDC1-201ENST00000371429 IGHV1-58A0A0C4DH39 117 aa10.98□□□□□ -0.65
NDC1-201ENST00000371429 TANC2Q9HCD6 1990 aa10.97□□□□□ -0.65
NDC1-201ENST00000371429 BBC3Q96PG8 261 aaPredicted RBP10.97□□□□□ -0.65
NDC1-201ENST00000371429 TTTY13Q9BZ97 58 aa10.97□□□□□ -0.65
NDC1-201ENST00000371429 E9PLD3 99 aa10.97□□□□□ -0.65
NDC1-201ENST00000371429 NTN5Q8WTR8 489 aaPredicted RBP10.96□□□□□ -0.65
NDC1-201ENST00000371429 POLQO75417 2590 aa10.96□□□□□ -0.65
NDC1-201ENST00000371429 NDUFS5O43920 106 aa10.96□□□□□ -0.66
NDC1-201ENST00000371429 CFAP126Q5VTH2 177 aa10.96□□□□□ -0.66
NDC1-201ENST00000371429 CHCHD10Q8WYQ3 142 aaPredicted RBP10.96□□□□□ -0.66
NDC1-201ENST00000371429 KIR2DL5BA0A0G2JN68 375 aa10.95□□□□□ -0.66
NDC1-201ENST00000371429 KIR2DL5BA0A0G2JPC4 375 aa10.95□□□□□ -0.66
NDC1-201ENST00000371429 KIR2DL5AQ8N109 375 aa10.95□□□□□ -0.66
NDC1-201ENST00000371429 KIR2DL5BQ8NHK3 375 aa10.95□□□□□ -0.66
NDC1-201ENST00000371429 TRBV6-4A0A1B0GX49 114 aa10.95□□□□□ -0.66
NDC1-201ENST00000371429 A0A1B0GXF2 115 aa10.95□□□□□ -0.66
NDC1-201ENST00000371429 ODF1Q14990 250 aa10.95□□□□□ -0.66
NDC1-201ENST00000371429 NEXN-AS1Q8NBZ9 246 aa10.94□□□□□ -0.66
NDC1-201ENST00000371429 COL5A1P20908 1838 aaPredicted RBP10.94□□□□□ -0.66
NDC1-201ENST00000371429 PKD1L2Q7Z442 2459 aa10.94□□□□□ -0.66
NDC1-201ENST00000371429 DIRC1Q969H9 104 aa10.94□□□□□ -0.66
NDC1-201ENST00000371429 LINC00467Q9BRT7 94 aa10.94□□□□□ -0.66
NDC1-201ENST00000371429 K7EP13 123 aa10.93□□□□□ -0.66
NDC1-201ENST00000371429 UFSP1Q6NVU6 142 aa10.93□□□□□ -0.66
NDC1-201ENST00000371429 TRBV6-8A0A0A6YYG3 113 aa10.92□□□□□ -0.66
NDC1-201ENST00000371429 H7C423 109 aa10.91□□□□□ -0.66
NDC1-201ENST00000371429 RS1O15537 224 aa10.91□□□□□ -0.66
NDC1-201ENST00000371429 IGLV2-18A0A075B6J9 118 aa10.91□□□□□ -0.66
NDC1-201ENST00000371429 Q8N976 141 aa10.91□□□□□ -0.66
NDC1-201ENST00000371429 IGHV4-30-4P0DP06 118 aa10.91□□□□□ -0.66
NDC1-201ENST00000371429 KPRPQ5T749 579 aaPredicted RBP10.91□□□□□ -0.66
NDC1-201ENST00000371429 CRIP1P50238 77 aa10.9□□□□□ -0.66
NDC1-201ENST00000371429 M0QY20 66 aa10.9□□□□□ -0.66
NDC1-201ENST00000371429 TRACP01848 142 aa10.9□□□□□ -0.66
NDC1-201ENST00000371429 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.9□□□□□ -0.67
NDC1-201ENST00000371429 PROK1P58294 105 aa10.9□□□□□ -0.67
NDC1-201ENST00000371429 NDUFB1O75438 58 aa10.89□□□□□ -0.67
NDC1-201ENST00000371429 LECT2O14960 151 aa10.89□□□□□ -0.67
NDC1-201ENST00000371429 TDRG1Q3Y452 100 aa10.89□□□□□ -0.67
NDC1-201ENST00000371429 DCANP1Q8TF63 244 aa10.89□□□□□ -0.67
NDC1-201ENST00000371429 B9D2Q9BPU9 175 aa10.89□□□□□ -0.67
NDC1-201ENST00000371429 HIGD2AQ9BW72 106 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms