RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 C9orf85Q96MD7 179 aa9.63□□□□□ -0.87
GPC4-201ENST00000370828 DKK4Q9UBT3 224 aa9.63□□□□□ -0.87
GPC4-201ENST00000370828 CDK2AP2O75956 126 aa9.63□□□□□ -0.87
GPC4-201ENST00000370828 Q8N9W7 124 aa9.63□□□□□ -0.87
GPC4-201ENST00000370828 WISP2O76076 250 aa9.63□□□□□ -0.87
GPC4-201ENST00000370828 MED14OSP0DP75 135 aa9.63□□□□□ -0.87
GPC4-201ENST00000370828 PDE6GP18545 87 aa9.63□□□□□ -0.87
GPC4-201ENST00000370828 AJUBAQ96IF1 538 aa9.63□□□□□ -0.87
GPC4-201ENST00000370828 SP5Q6BEB4 398 aaPredicted RBP9.62□□□□□ -0.87
GPC4-201ENST00000370828 CDIP1Q9H305 208 aa9.62□□□□□ -0.87
GPC4-201ENST00000370828 SOSTDC1Q6X4U4 206 aa9.62□□□□□ -0.87
GPC4-201ENST00000370828 PTPRQQ9UMZ3 2332 aa9.62□□□□□ -0.87
GPC4-201ENST00000370828 TMEM223A0PJW6 202 aa9.62□□□□□ -0.87
GPC4-201ENST00000370828 ZNF561-AS1K7EIQ3 104 aa9.61□□□□□ -0.87
GPC4-201ENST00000370828 CMC4P56277 68 aaPredicted RBP9.61□□□□□ -0.87
GPC4-201ENST00000370828 NOP10Q9NPE3 64 aaKnown RBP9.61□□□□□ -0.87
GPC4-201ENST00000370828 SNURFQ9Y675 71 aa9.61□□□□□ -0.87
GPC4-201ENST00000370828 ANGP03950 147 aaKnown RBP9.61□□□□□ -0.87
GPC4-201ENST00000370828 ARHGAP32A7KAX9 2087 aa9.61□□□□□ -0.87
GPC4-201ENST00000370828 WDR87Q6ZQQ6 2873 aa9.61□□□□□ -0.87
GPC4-201ENST00000370828 ANKHD1Q8IWZ3 2542 aaKnown RBP9.6□□□□□ -0.87
GPC4-201ENST00000370828 KIAA1549LQ6ZVL6 1849 aa9.6□□□□□ -0.87
GPC4-201ENST00000370828 IGHV4-28A0A0C4DH34 117 aa9.6□□□□□ -0.87
GPC4-201ENST00000370828 Q6JHZ5 121 aa9.6□□□□□ -0.87
GPC4-201ENST00000370828 UNQ9165/PRO28630Q6UXU0 137 aa9.6□□□□□ -0.87
GPC4-201ENST00000370828 NRACQ8N912 160 aa9.6□□□□□ -0.87
GPC4-201ENST00000370828 DEFB105AQ8NG35 78 aa9.6□□□□□ -0.87
GPC4-201ENST00000370828 CRIP2P52943 208 aaPredicted RBP9.6□□□□□ -0.87
GPC4-201ENST00000370828 EDN2P20800 178 aa9.6□□□□□ -0.87
GPC4-201ENST00000370828 CRYGAP11844 174 aa9.59□□□□□ -0.87
GPC4-201ENST00000370828 NREPQ16612 68 aa9.59□□□□□ -0.87
GPC4-201ENST00000370828 ENHOQ6UWT2 76 aa9.59□□□□□ -0.87
GPC4-201ENST00000370828 LINC01619G3V211 115 aa9.59□□□□□ -0.87
GPC4-201ENST00000370828 CDKN2A-AS1Q9UH64 79 aa9.59□□□□□ -0.87
GPC4-201ENST00000370828 A8MZ25 164 aa9.59□□□□□ -0.87
GPC4-201ENST00000370828 APRG1Q8IVJ8 170 aa9.59□□□□□ -0.87
GPC4-201ENST00000370828 SLPIP03973 132 aa9.58□□□□□ -0.88
GPC4-201ENST00000370828 ZMAT4Q9H898 229 aa9.58□□□□□ -0.88
GPC4-201ENST00000370828 TRAV7A0A075B6U4 112 aa9.58□□□□□ -0.88
GPC4-201ENST00000370828 MSMBP08118 114 aa9.58□□□□□ -0.88
GPC4-201ENST00000370828 MAPK1IP1LQ8NDC0 245 aa9.58□□□□□ -0.88
GPC4-201ENST00000370828 A0A096LNJ9 63 aa9.58□□□□□ -0.88
GPC4-201ENST00000370828 IGLV4-3A0A075B6K6 122 aa9.57□□□□□ -0.88
GPC4-201ENST00000370828 H7C423 109 aa9.57□□□□□ -0.88
GPC4-201ENST00000370828 SORL1Q92673 2214 aa9.57□□□□□ -0.88
GPC4-201ENST00000370828 LINC00574Q9H8X3 128 aa9.57□□□□□ -0.88
GPC4-201ENST00000370828 NCR3O14931 201 aa9.57□□□□□ -0.88
GPC4-201ENST00000370828 NKAPP1Q8N9T2 125 aa9.57□□□□□ -0.88
GPC4-201ENST00000370828 IGLV10-54A0A075B6I4 117 aa9.57□□□□□ -0.88
GPC4-201ENST00000370828 GRNP28799 593 aaKnown RBP9.57□□□□□ -0.88
GPC4-201ENST00000370828 LINC00308Q8TCZ7 52 aa9.56□□□□□ -0.88
GPC4-201ENST00000370828 TRBV27A0A0K0K1C4 114 aa9.56□□□□□ -0.88
GPC4-201ENST00000370828 LST1O00453 97 aa9.56□□□□□ -0.88
GPC4-201ENST00000370828 MIFP14174 115 aa9.56□□□□□ -0.88
GPC4-201ENST00000370828 DEFB136Q30KP8 78 aa9.56□□□□□ -0.88
GPC4-201ENST00000370828 C11orf21Q9P2W6 132 aa9.56□□□□□ -0.88
GPC4-201ENST00000370828 SMAD5-AS1Q9Y6J3 95 aa9.56□□□□□ -0.88
GPC4-201ENST00000370828 TMEM256-PLSCR3K7ERE1 68 aa9.56□□□□□ -0.88
GPC4-201ENST00000370828 PIK3CD-AS1Q5SR53 167 aa9.56□□□□□ -0.88
GPC4-201ENST00000370828 TMEM131Q92545 1883 aa9.56□□□□□ -0.88
GPC4-201ENST00000370828 IGFL3Q6UXB1 125 aa9.56□□□□□ -0.88
GPC4-201ENST00000370828 SEM1Q6ZVN7 128 aa9.56□□□□□ -0.88
GPC4-201ENST00000370828 TMEM263Q8WUH6 116 aaKnown RBP9.56□□□□□ -0.88
GPC4-201ENST00000370828 COL4A4P53420 1690 aaPredicted RBP9.56□□□□□ -0.88
GPC4-201ENST00000370828 H3BUA1 57 aa9.55□□□□□ -0.88
GPC4-201ENST00000370828 TRBV7-7A0A0K0K1E9 115 aa9.55□□□□□ -0.88
GPC4-201ENST00000370828 BDP1A6H8Y1 2624 aa9.55□□□□□ -0.88
GPC4-201ENST00000370828 UBE2D1P51668 147 aa9.55□□□□□ -0.88
GPC4-201ENST00000370828 CCDC140Q96MF4 163 aa9.55□□□□□ -0.88
GPC4-201ENST00000370828 K7EQD1 137 aa9.54□□□□□ -0.88
GPC4-201ENST00000370828 CSPG4Q6UVK1 2322 aa9.54□□□□□ -0.88
GPC4-201ENST00000370828 C2orf16Q68DN1 1984 aa9.54□□□□□ -0.88
GPC4-201ENST00000370828 NDUFB1O75438 58 aa9.54□□□□□ -0.88
GPC4-201ENST00000370828 C4orf48Q5BLP8 95 aa9.54□□□□□ -0.88
GPC4-201ENST00000370828 TIRAPP58753 221 aa9.53□□□□□ -0.88
GPC4-201ENST00000370828 TRBV7-6A0A0J9YX20 115 aa9.53□□□□□ -0.88
GPC4-201ENST00000370828 UBE2D3P61077 147 aa9.53□□□□□ -0.88
GPC4-201ENST00000370828 UBE2D2P62837 147 aa9.53□□□□□ -0.88
GPC4-201ENST00000370828 FAM19A3Q7Z5A8 133 aa9.53□□□□□ -0.88
GPC4-201ENST00000370828 C5orf56Q8N8D9 126 aa9.53□□□□□ -0.88
GPC4-201ENST00000370828 LINC01548A6NM66 108 aa9.53□□□□□ -0.88
GPC4-201ENST00000370828 SCXQ7RTU7 201 aa9.52□□□□□ -0.88
GPC4-201ENST00000370828 PLAC8L1A1L4L8 177 aa9.52□□□□□ -0.89
GPC4-201ENST00000370828 LINC00467Q9BRT7 94 aa9.52□□□□□ -0.89
GPC4-201ENST00000370828 PTPN13Q12923 2485 aa9.52□□□□□ -0.89
GPC4-201ENST00000370828 ZFAND2AQ8N6M9 145 aa9.52□□□□□ -0.89
GPC4-201ENST00000370828 FAM208BQ5VWN6 2430 aa9.51□□□□□ -0.89
GPC4-201ENST00000370828 CASC2Q6XLA1 102 aa9.51□□□□□ -0.89
GPC4-201ENST00000370828 IGHV4-59P01825 116 aa9.51□□□□□ -0.89
GPC4-201ENST00000370828 SLURP1P55000 103 aa9.51□□□□□ -0.89
GPC4-201ENST00000370828 CXCL6P80162 114 aa9.51□□□□□ -0.89
GPC4-201ENST00000370828 NUP210LQ5VU65 1888 aa9.5□□□□□ -0.89
GPC4-201ENST00000370828 A0A0J9YX75 114 aa9.5□□□□□ -0.89
GPC4-201ENST00000370828 LINC01356Q8N9X3 169 aa9.5□□□□□ -0.89
GPC4-201ENST00000370828 AGRNO00468 2067 aa9.5□□□□□ -0.89
GPC4-201ENST00000370828 ATG2AQ2TAZ0 1938 aa9.5□□□□□ -0.89
GPC4-201ENST00000370828 DSCR9P59020 149 aa9.5□□□□□ -0.89
GPC4-201ENST00000370828 PRR15LQ9BU68 103 aa9.5□□□□□ -0.89
GPC4-201ENST00000370828 M0QY20 66 aa9.5□□□□□ -0.89
GPC4-201ENST00000370828 GNLYP22749 145 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms