RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 MPV17L2Q567V2 206 aa10.01□□□□□ -0.81
COL9A1-204ENST00000370496 RPS10P5Q9NQ39 176 aa10.01□□□□□ -0.81
COL9A1-204ENST00000370496 DNAH10Q8IVF4 4471 aa10.01□□□□□ -0.81
COL9A1-204ENST00000370496 I3L3M4 83 aa10.01□□□□□ -0.81
COL9A1-204ENST00000370496 PMCHP20382 165 aa10.01□□□□□ -0.81
COL9A1-204ENST00000370496 ELOBQ15370 118 aa10.01□□□□□ -0.81
COL9A1-204ENST00000370496 SVBPQ8N300 66 aa10.01□□□□□ -0.81
COL9A1-204ENST00000370496 TMEM70Q9BUB7 260 aa10.01□□□□□ -0.81
COL9A1-204ENST00000370496 TRAV9-1A0A075B6T8 112 aa10□□□□□ -0.81
COL9A1-204ENST00000370496 D6R8Y8 96 aa10□□□□□ -0.81
COL9A1-204ENST00000370496 NRACQ8N912 160 aa10□□□□□ -0.81
COL9A1-204ENST00000370496 KLK12Q9UKR0 248 aa10□□□□□ -0.81
COL9A1-204ENST00000370496 PSCAO43653 123 aa9.99□□□□□ -0.81
COL9A1-204ENST00000370496 SNAPINO95295 136 aa9.99□□□□□ -0.81
COL9A1-204ENST00000370496 CRPP02741 224 aa9.99□□□□□ -0.81
COL9A1-204ENST00000370496 SUMO2P61956 95 aaKnown RBP9.99□□□□□ -0.81
COL9A1-204ENST00000370496 TNP2Q05952 138 aa9.99□□□□□ -0.81
COL9A1-204ENST00000370496 TMEM242Q9NWH2 141 aa9.99□□□□□ -0.81
COL9A1-204ENST00000370496 TRAV8-3A0A0A6YYJ7 113 aa9.98□□□□□ -0.81
COL9A1-204ENST00000370496 PPBPP02775 128 aa9.98□□□□□ -0.81
COL9A1-204ENST00000370496 ANGP03950 147 aaKnown RBP9.98□□□□□ -0.81
COL9A1-204ENST00000370496 ATRAIDQ6UW56 229 aa9.98□□□□□ -0.81
COL9A1-204ENST00000370496 Q6ZRN7 208 aaPredicted RBP9.98□□□□□ -0.81
COL9A1-204ENST00000370496 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
COL9A1-204ENST00000370496 Q8N976 141 aa9.98□□□□□ -0.81
COL9A1-204ENST00000370496 TRBV27A0A0K0K1C4 114 aa9.97□□□□□ -0.81
COL9A1-204ENST00000370496 FCER1GP30273 86 aa9.97□□□□□ -0.81
COL9A1-204ENST00000370496 RBX1P62877 108 aa9.97□□□□□ -0.81
COL9A1-204ENST00000370496 UBE2WQ96B02 151 aa9.97□□□□□ -0.81
COL9A1-204ENST00000370496 VCYO14598 125 aa9.96□□□□□ -0.82
COL9A1-204ENST00000370496 TNFRSF6BO95407 300 aa9.96□□□□□ -0.82
COL9A1-204ENST00000370496 TSHBP01222 138 aa9.96□□□□□ -0.82
COL9A1-204ENST00000370496 POLR2KP53803 58 aaKnown RBP9.96□□□□□ -0.82
COL9A1-204ENST00000370496 RMI2Q96E14 147 aa9.96□□□□□ -0.82
COL9A1-204ENST00000370496 KIR2DL4Q99706 377 aa9.96□□□□□ -0.82
COL9A1-204ENST00000370496 C20orf78Q9BR46 151 aa9.96□□□□□ -0.82
COL9A1-204ENST00000370496 FAT2Q9NYQ8 4349 aa9.96□□□□□ -0.82
COL9A1-204ENST00000370496 HECTD4Q9Y4D8 3996 aa9.96□□□□□ -0.82
COL9A1-204ENST00000370496 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.95□□□□□ -0.82
COL9A1-204ENST00000370496 IGKV2-29A2NJV5 120 aaPredicted RBP9.95□□□□□ -0.82
COL9A1-204ENST00000370496 NPYP01303 97 aa9.95□□□□□ -0.82
COL9A1-204ENST00000370496 AMMECR1LQ6DCA0 310 aa9.95□□□□□ -0.82
COL9A1-204ENST00000370496 CLPSL2Q6UWE3 100 aa9.95□□□□□ -0.82
COL9A1-204ENST00000370496 TMEM136Q6ZRR5 245 aa9.95□□□□□ -0.82
COL9A1-204ENST00000370496 PRELID3AQ96N28 172 aa9.95□□□□□ -0.82
COL9A1-204ENST00000370496 TM2D2Q9BX73 214 aa9.95□□□□□ -0.82
COL9A1-204ENST00000370496 TRBV24-1A0A075B6N3 115 aa9.94□□□□□ -0.82
COL9A1-204ENST00000370496 A0A1B0GVY2 172 aa9.94□□□□□ -0.82
COL9A1-204ENST00000370496 PHOX2AO14813 284 aa9.94□□□□□ -0.82
COL9A1-204ENST00000370496 Q0VG73 95 aa9.94□□□□□ -0.82
COL9A1-204ENST00000370496 SLC7A5P1Q8MH63 180 aa9.94□□□□□ -0.82
COL9A1-204ENST00000370496 SMIM2Q9BVW6 85 aa9.94□□□□□ -0.82
COL9A1-204ENST00000370496 IGKV2D-24A0A075B6R9 120 aa9.93□□□□□ -0.82
COL9A1-204ENST00000370496 EREGO14944 169 aa9.93□□□□□ -0.82
COL9A1-204ENST00000370496 HLA-DQA1P01909 254 aa9.93□□□□□ -0.82
COL9A1-204ENST00000370496 RNASEKQ6P5S7 137 aaKnown RBP9.93□□□□□ -0.82
COL9A1-204ENST00000370496 LAMTOR2Q9Y2Q5 125 aa9.93□□□□□ -0.82
COL9A1-204ENST00000370496 DNAH17Q9UFH2 4485 aa9.93□□□□□ -0.82
COL9A1-204ENST00000370496 EPPK1P58107 5090 aaKnown RBP9.92□□□□□ -0.82
COL9A1-204ENST00000370496 H7C423 109 aa9.92□□□□□ -0.82
COL9A1-204ENST00000370496 RPL32P62910 135 aaKnown RBP9.92□□□□□ -0.82
COL9A1-204ENST00000370496 LINC00269Q8N2A0 174 aa9.92□□□□□ -0.82
COL9A1-204ENST00000370496 C1orf43Q9BWL3 253 aa9.92□□□□□ -0.82
COL9A1-204ENST00000370496 COX11Q9Y6N1 276 aa9.92□□□□□ -0.82
COL9A1-204ENST00000370496 A0A1B0GUV1 79 aa9.91□□□□□ -0.82
COL9A1-204ENST00000370496 TCAPO15273 167 aa9.91□□□□□ -0.82
COL9A1-204ENST00000370496 FGF6P10767 208 aa9.91□□□□□ -0.82
COL9A1-204ENST00000370496 MIAQ16674 131 aa9.91□□□□□ -0.82
COL9A1-204ENST00000370496 COX19Q49B96 90 aa9.91□□□□□ -0.82
COL9A1-204ENST00000370496 MAP1LC3AQ9H492 121 aa9.91□□□□□ -0.82
COL9A1-204ENST00000370496 IGLV4-60A0A075B6I1 120 aa9.9□□□□□ -0.82
COL9A1-204ENST00000370496 MT-ND6P03923 174 aa9.9□□□□□ -0.82
COL9A1-204ENST00000370496 ESDP10768 282 aa9.9□□□□□ -0.82
COL9A1-204ENST00000370496 ZNF25P17030 456 aaPredicted RBP9.9□□□□□ -0.82
COL9A1-204ENST00000370496 REG3AQ06141 175 aa9.9□□□□□ -0.82
COL9A1-204ENST00000370496 ENHOQ6UWT2 76 aa9.9□□□□□ -0.82
COL9A1-204ENST00000370496 C20orf203Q8NBC4 194 aa9.9□□□□□ -0.82
COL9A1-204ENST00000370496 TMEM101Q96IK0 257 aa9.9□□□□□ -0.82
COL9A1-204ENST00000370496 GNB1LQ9BYB4 327 aa9.9□□□□□ -0.82
COL9A1-204ENST00000370496 A0A087WTM6 91 aa9.89□□□□□ -0.83
COL9A1-204ENST00000370496 PRR34Q9NV39 138 aa9.89□□□□□ -0.83
COL9A1-204ENST00000370496 TGIF2-C20orf24A0A0A6YYL0 155 aa9.88□□□□□ -0.83
COL9A1-204ENST00000370496 LOC389332A0A1B0GUA5 103 aa9.88□□□□□ -0.83
COL9A1-204ENST00000370496 SMAGPQ0VAQ4 97 aa9.88□□□□□ -0.83
COL9A1-204ENST00000370496 SPATA12Q7Z6I5 190 aa9.88□□□□□ -0.83
COL9A1-204ENST00000370496 OR5A1Q8NGJ0 315 aa9.88□□□□□ -0.83
COL9A1-204ENST00000370496 TMEM18Q96B42 140 aa9.88□□□□□ -0.83
COL9A1-204ENST00000370496 IGKV3OR2-268A0A0C4DH90 116 aa9.88□□□□□ -0.83
COL9A1-204ENST00000370496 RAB5AP20339 215 aa9.88□□□□□ -0.83
COL9A1-204ENST00000370496 KIAA1644Q3SXP7 199 aa9.88□□□□□ -0.83
COL9A1-204ENST00000370496 IGLV10-54A0A075B6I4 117 aa9.87□□□□□ -0.83
COL9A1-204ENST00000370496 DGAT2L7PQ6IED9 249 aa9.87□□□□□ -0.83
COL9A1-204ENST00000370496 MRPL18Q9H0U6 180 aaKnown RBP9.87□□□□□ -0.83
COL9A1-204ENST00000370496 PKD1P98161 4303 aa9.86□□□□□ -0.83
COL9A1-204ENST00000370496 LECT2O14960 151 aa9.86□□□□□ -0.83
COL9A1-204ENST00000370496 MRPL52Q86TS9 123 aaKnown RBP9.86□□□□□ -0.83
COL9A1-204ENST00000370496 LRCOL1A6NCL2 159 aa9.85□□□□□ -0.83
COL9A1-204ENST00000370496 C16orf90A8MZG2 172 aa9.85□□□□□ -0.83
COL9A1-204ENST00000370496 FABP9Q0Z7S8 132 aa9.85□□□□□ -0.83
COL9A1-204ENST00000370496 CBLN2Q8IUK8 224 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms