RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 TRAV8-3A0A0A6YYJ7 113 aa9.33□□□□□ -0.92
SSR4-202ENST00000370085 IBA57-AS1B1ANH7 110 aa9.33□□□□□ -0.92
SSR4-202ENST00000370085 D6R8Y8 96 aa9.33□□□□□ -0.92
SSR4-202ENST00000370085 SMKR1H3BMG3 65 aa9.33□□□□□ -0.92
SSR4-202ENST00000370085 FCER1GP30273 86 aa9.33□□□□□ -0.92
SSR4-202ENST00000370085 TMEM136Q6ZRR5 245 aa9.33□□□□□ -0.92
SSR4-202ENST00000370085 NTM-AS1Q6ZSK4 140 aa9.33□□□□□ -0.92
SSR4-202ENST00000370085 KRTAP1-5Q9BYS1 174 aa9.33□□□□□ -0.92
SSR4-202ENST00000370085 LAMTOR2Q9Y2Q5 125 aa9.33□□□□□ -0.92
SSR4-202ENST00000370085 TRBV24-1A0A075B6N3 115 aa9.32□□□□□ -0.92
SSR4-202ENST00000370085 TRBV27A0A0K0K1C4 114 aa9.32□□□□□ -0.92
SSR4-202ENST00000370085 TNFRSF6BO95407 300 aa9.32□□□□□ -0.92
SSR4-202ENST00000370085 HLA-DQA1P01909 254 aa9.32□□□□□ -0.92
SSR4-202ENST00000370085 RPS10P46783 165 aaKnown RBP9.32□□□□□ -0.92
SSR4-202ENST00000370085 SMAGPQ0VAQ4 97 aa9.32□□□□□ -0.92
SSR4-202ENST00000370085 SLC7A5P1Q8MH63 180 aa9.32□□□□□ -0.92
SSR4-202ENST00000370085 NRACQ8N912 160 aa9.32□□□□□ -0.92
SSR4-202ENST00000370085 RMI2Q96E14 147 aa9.32□□□□□ -0.92
SSR4-202ENST00000370085 PRSS29PA6NIE9 313 aa9.31□□□□□ -0.92
SSR4-202ENST00000370085 H7C423 109 aa9.31□□□□□ -0.92
SSR4-202ENST00000370085 CRPP02741 224 aa9.31□□□□□ -0.92
SSR4-202ENST00000370085 MT-ND6P03923 174 aa9.31□□□□□ -0.92
SSR4-202ENST00000370085 POLR2KP53803 58 aaKnown RBP9.31□□□□□ -0.92
SSR4-202ENST00000370085 Q0VG73 95 aa9.31□□□□□ -0.92
SSR4-202ENST00000370085 GAGE6Q13070 117 aa9.31□□□□□ -0.92
SSR4-202ENST00000370085 PRELID3AQ96N28 172 aa9.31□□□□□ -0.92
SSR4-202ENST00000370085 TM2D2Q9BX73 214 aa9.31□□□□□ -0.92
SSR4-202ENST00000370085 GNB1LQ9BYB4 327 aa9.31□□□□□ -0.92
SSR4-202ENST00000370085 COX11Q9Y6N1 276 aa9.31□□□□□ -0.92
SSR4-202ENST00000370085 RTL8CO15255 209 aa9.3□□□□□ -0.92
SSR4-202ENST00000370085 PSCAO43653 123 aa9.3□□□□□ -0.92
SSR4-202ENST00000370085 GAS8-AS1O95177 125 aa9.3□□□□□ -0.92
SSR4-202ENST00000370085 ANGP03950 147 aaKnown RBP9.3□□□□□ -0.92
SSR4-202ENST00000370085 RPL32P62910 135 aaKnown RBP9.3□□□□□ -0.92
SSR4-202ENST00000370085 AMMECR1LQ6DCA0 310 aa9.3□□□□□ -0.92
SSR4-202ENST00000370085 Q9HAA7 133 aa9.3□□□□□ -0.92
SSR4-202ENST00000370085 KLK12Q9UKR0 248 aa9.3□□□□□ -0.92
SSR4-202ENST00000370085 A0A1B0GUV1 79 aa9.29□□□□□ -0.92
SSR4-202ENST00000370085 EREGO14944 169 aa9.29□□□□□ -0.92
SSR4-202ENST00000370085 MPV17L2Q567V2 206 aa9.29□□□□□ -0.92
SSR4-202ENST00000370085 ATRAIDQ6UW56 229 aa9.29□□□□□ -0.92
SSR4-202ENST00000370085 TMEM18Q96B42 140 aa9.29□□□□□ -0.92
SSR4-202ENST00000370085 TSHBP01222 138 aa9.28□□□□□ -0.92
SSR4-202ENST00000370085 RAB5AP20339 215 aa9.28□□□□□ -0.92
SSR4-202ENST00000370085 RBX1P62877 108 aa9.28□□□□□ -0.92
SSR4-202ENST00000370085 DEFB104AQ8WTQ1 72 aa9.28□□□□□ -0.92
SSR4-202ENST00000370085 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
SSR4-202ENST00000370085 TMEM101Q96IK0 257 aa9.28□□□□□ -0.92
SSR4-202ENST00000370085 SMIM2Q9BVW6 85 aa9.28□□□□□ -0.92
SSR4-202ENST00000370085 MAP1LC3AQ9H492 121 aa9.28□□□□□ -0.92
SSR4-202ENST00000370085 NPYP01303 97 aa9.27□□□□□ -0.93
SSR4-202ENST00000370085 ZNF25P17030 456 aaPredicted RBP9.27□□□□□ -0.93
SSR4-202ENST00000370085 RNASEKQ6P5S7 137 aaKnown RBP9.27□□□□□ -0.93
SSR4-202ENST00000370085 Q8N3U1 123 aa9.27□□□□□ -0.93
SSR4-202ENST00000370085 Q8N976 141 aa9.27□□□□□ -0.93
SSR4-202ENST00000370085 MIAQ16674 131 aa9.26□□□□□ -0.93
SSR4-202ENST00000370085 SMCO4Q9NRQ5 59 aa9.26□□□□□ -0.93
SSR4-202ENST00000370085 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.25□□□□□ -0.93
SSR4-202ENST00000370085 IGKV2-29A2NJV5 120 aaPredicted RBP9.25□□□□□ -0.93
SSR4-202ENST00000370085 DGAT2L7PQ6IED9 249 aa9.25□□□□□ -0.93
SSR4-202ENST00000370085 C1orf43Q9BWL3 253 aa9.25□□□□□ -0.93
SSR4-202ENST00000370085 IGKV2D-24A0A075B6R9 120 aa9.24□□□□□ -0.93
SSR4-202ENST00000370085 TGIF2-C20orf24A0A0A6YYL0 155 aa9.24□□□□□ -0.93
SSR4-202ENST00000370085 PRSS47A8MTI9 375 aa9.24□□□□□ -0.93
SSR4-202ENST00000370085 K7EMI3 77 aa9.24□□□□□ -0.93
SSR4-202ENST00000370085 FGF6P10767 208 aa9.24□□□□□ -0.93
SSR4-202ENST00000370085 ESDP10768 282 aa9.24□□□□□ -0.93
SSR4-202ENST00000370085 FABP9Q0Z7S8 132 aa9.24□□□□□ -0.93
SSR4-202ENST00000370085 Q6ZRN7 208 aaPredicted RBP9.24□□□□□ -0.93
SSR4-202ENST00000370085 LINC00269Q8N2A0 174 aa9.24□□□□□ -0.93
SSR4-202ENST00000370085 OR5A1Q8NGJ0 315 aa9.24□□□□□ -0.93
SSR4-202ENST00000370085 MRPL18Q9H0U6 180 aaKnown RBP9.24□□□□□ -0.93
SSR4-202ENST00000370085 NXT2Q9NPJ8 142 aaKnown RBP9.24□□□□□ -0.93
SSR4-202ENST00000370085 TRAV8-4A0A0B4J246 113 aa9.23□□□□□ -0.93
SSR4-202ENST00000370085 LOC389332A0A1B0GUA5 103 aa9.23□□□□□ -0.93
SSR4-202ENST00000370085 G0S2P27469 103 aa9.23□□□□□ -0.93
SSR4-202ENST00000370085 TNP2Q05952 138 aa9.23□□□□□ -0.93
SSR4-202ENST00000370085 REG3AQ06141 175 aa9.23□□□□□ -0.93
SSR4-202ENST00000370085 PRR34Q9NV39 138 aa9.23□□□□□ -0.93
SSR4-202ENST00000370085 TRAPPC1Q9Y5R8 145 aa9.23□□□□□ -0.93
SSR4-202ENST00000370085 DNAH2Q9P225 4427 aa9.23□□□□□ -0.93
SSR4-202ENST00000370085 KIAA1644Q3SXP7 199 aa9.22□□□□□ -0.93
SSR4-202ENST00000370085 MRPL52Q86TS9 123 aaKnown RBP9.22□□□□□ -0.93
SSR4-202ENST00000370085 Q8N8P6 123 aa9.22□□□□□ -0.93
SSR4-202ENST00000370085 C20orf203Q8NBC4 194 aa9.22□□□□□ -0.93
SSR4-202ENST00000370085 DNAH10Q8IVF4 4471 aa9.21□□□□□ -0.93
SSR4-202ENST00000370085 IGLV4-60A0A075B6I1 120 aa9.21□□□□□ -0.94
SSR4-202ENST00000370085 ORMDL2Q53FV1 153 aa9.21□□□□□ -0.94
SSR4-202ENST00000370085 CLPSL2Q6UWE3 100 aa9.21□□□□□ -0.94
SSR4-202ENST00000370085 ENHOQ6UWT2 76 aa9.21□□□□□ -0.94
SSR4-202ENST00000370085 FRAS1Q86XX4 4008 aa9.21□□□□□ -0.94
SSR4-202ENST00000370085 PRSS3P2Q8NHM4 247 aa9.2□□□□□ -0.94
SSR4-202ENST00000370085 TIMM21Q9BVV7 248 aa9.2□□□□□ -0.94
SSR4-202ENST00000370085 CSDC2Q9Y534 153 aaKnown RBP9.2□□□□□ -0.94
SSR4-202ENST00000370085 CBLN2Q8IUK8 224 aa9.19□□□□□ -0.94
SSR4-202ENST00000370085 ALKBH7Q9BT30 221 aaPredicted RBP9.19□□□□□ -0.94
SSR4-202ENST00000370085 SPANXA1Q9NS26 97 aa9.19□□□□□ -0.94
SSR4-202ENST00000370085 A0A087WTM6 91 aa9.18□□□□□ -0.94
SSR4-202ENST00000370085 ZNF664Q8N3J9 261 aa9.18□□□□□ -0.94
SSR4-202ENST00000370085 UBE2D4Q9Y2X8 147 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms