RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 G0S2P27469 103 aa16.76■□□□□ 0.27
SNX3-203ENST00000368979 DAZ4Q86SG3 579 aaKnown RBP16.76■□□□□ 0.27
SNX3-203ENST00000368979 DAZ3Q9NR90 486 aaKnown RBP16.76■□□□□ 0.27
SNX3-203ENST00000368979 Q8N976 141 aa16.75■□□□□ 0.27
SNX3-203ENST00000368979 MAP1LC3CQ9BXW4 147 aa16.75■□□□□ 0.27
SNX3-203ENST00000368979 SYS1-DBNDD2H3BUS1 97 aa16.75■□□□□ 0.27
SNX3-203ENST00000368979 COTL1Q14019 142 aa16.75■□□□□ 0.27
SNX3-203ENST00000368979 LINC00518Q8N0U6 118 aa16.75■□□□□ 0.27
SNX3-203ENST00000368979 IFI27L1Q96BM0 104 aa16.75■□□□□ 0.27
SNX3-203ENST00000368979 CYSLTR1Q9Y271 337 aa16.75■□□□□ 0.27
SNX3-203ENST00000368979 LINC01549A6NIU2 74 aa16.74■□□□□ 0.27
SNX3-203ENST00000368979 C20orf203Q8NBC4 194 aa16.74■□□□□ 0.27
SNX3-203ENST00000368979 B9D2Q9BPU9 175 aa16.74■□□□□ 0.27
SNX3-203ENST00000368979 ZMAT4Q9H898 229 aa16.74■□□□□ 0.27
SNX3-203ENST00000368979 PAX4O43316 350 aa16.73■□□□□ 0.27
SNX3-203ENST00000368979 ATP5LO75964 103 aa16.73■□□□□ 0.27
SNX3-203ENST00000368979 VSIG2Q96IQ7 327 aa16.73■□□□□ 0.27
SNX3-203ENST00000368979 CHCHD7Q9BUK0 85 aa16.73■□□□□ 0.27
SNX3-203ENST00000368979 F5H768 121 aa16.72■□□□□ 0.27
SNX3-203ENST00000368979 SCGB1D1O95968 90 aa16.72■□□□□ 0.27
SNX3-203ENST00000368979 GYPEP15421 78 aa16.72■□□□□ 0.27
SNX3-203ENST00000368979 RPL39P62891 51 aaKnown RBP16.72■□□□□ 0.27
SNX3-203ENST00000368979 SPATA12Q7Z6I5 190 aa16.72■□□□□ 0.27
SNX3-203ENST00000368979 HTN3P15516 51 aa16.7■□□□□ 0.26
SNX3-203ENST00000368979 CDPF1Q6NVV7 123 aa16.7■□□□□ 0.26
SNX3-203ENST00000368979 PET117Q6UWS5 81 aa16.7■□□□□ 0.26
SNX3-203ENST00000368979 SCGB3A1Q96QR1 104 aa16.7■□□□□ 0.26
SNX3-203ENST00000368979 C12orf57Q99622 126 aa16.7■□□□□ 0.26
SNX3-203ENST00000368979 NTM-AS1Q6ZSK4 140 aa16.7■□□□□ 0.26
SNX3-203ENST00000368979 Q6ZTC4 211 aa16.7■□□□□ 0.26
SNX3-203ENST00000368979 ERASQ7Z444 233 aa16.7■□□□□ 0.26
SNX3-203ENST00000368979 C11orf45Q8TAV5 145 aa16.7■□□□□ 0.26
SNX3-203ENST00000368979 TRAV26-1A0A087WT03 109 aa16.69■□□□□ 0.26
SNX3-203ENST00000368979 GTSF1LQ9H1H1 148 aa16.69■□□□□ 0.26
SNX3-203ENST00000368979 TENM3Q9P273 2699 aa16.69■□□□□ 0.26
SNX3-203ENST00000368979 A0A0J9YY99 117 aa16.68■□□□□ 0.26
SNX3-203ENST00000368979 IGIPA6NJ69 53 aa16.68■□□□□ 0.26
SNX3-203ENST00000368979 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.68■□□□□ 0.26
SNX3-203ENST00000368979 NANOS2P60321 138 aaKnown RBP16.67■□□□□ 0.26
SNX3-203ENST00000368979 TIMM17AQ99595 171 aa16.67■□□□□ 0.26
SNX3-203ENST00000368979 H0Y8G0 127 aa16.66■□□□□ 0.26
SNX3-203ENST00000368979 LINC01545Q5VT33 79 aa16.66■□□□□ 0.26
SNX3-203ENST00000368979 HUWE1Q7Z6Z7 4374 aaKnown RBP16.66■□□□□ 0.26
SNX3-203ENST00000368979 ATP6V0E2Q8NHE4 81 aa16.65■□□□□ 0.26
SNX3-203ENST00000368979 TMEM141Q96I45 108 aa16.65■□□□□ 0.26
SNX3-203ENST00000368979 C20orf202A1L168 122 aa16.64■□□□□ 0.25
SNX3-203ENST00000368979 LGALS9CQ6DKI2 356 aa16.64■□□□□ 0.25
SNX3-203ENST00000368979 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.63■□□□□ 0.25
SNX3-203ENST00000368979 IGKV2-29A2NJV5 120 aaPredicted RBP16.63■□□□□ 0.25
SNX3-203ENST00000368979 PRSS1P07477 247 aa16.63■□□□□ 0.25
SNX3-203ENST00000368979 TMEM97Q5BJF2 176 aa16.63■□□□□ 0.25
SNX3-203ENST00000368979 Q6ZN92 141 aa16.63■□□□□ 0.25
SNX3-203ENST00000368979 BAALCQ8WXS3 180 aa16.63■□□□□ 0.25
SNX3-203ENST00000368979 PYGO1Q9Y3Y4 419 aa16.63■□□□□ 0.25
SNX3-203ENST00000368979 TEX43Q6ZNM6 134 aa16.62■□□□□ 0.25
SNX3-203ENST00000368979 UBE2D4Q9Y2X8 147 aa16.62■□□□□ 0.25
SNX3-203ENST00000368979 H3BNG1 76 aa16.61■□□□□ 0.25
SNX3-203ENST00000368979 DEFA6Q01524 100 aa16.61■□□□□ 0.25
SNX3-203ENST00000368979 TRBV6-8A0A0A6YYG3 113 aa16.6■□□□□ 0.25
SNX3-203ENST00000368979 TRAV12-1A0A0B4J245 112 aa16.6■□□□□ 0.25
SNX3-203ENST00000368979 ODF1Q14990 250 aa16.6■□□□□ 0.25
SNX3-203ENST00000368979 MRPL23Q16540 153 aaKnown RBP16.6■□□□□ 0.25
SNX3-203ENST00000368979 ICOSQ9Y6W8 199 aa16.6■□□□□ 0.25
SNX3-203ENST00000368979 TRBV25-1A0A075B6N4 114 aa16.6■□□□□ 0.25
SNX3-203ENST00000368979 PMCHL2Q9BQD1 86 aa16.6■□□□□ 0.25
SNX3-203ENST00000368979 TMEM243Q9BU79 118 aa16.6■□□□□ 0.25
SNX3-203ENST00000368979 SPANXA1Q9NS26 97 aa16.6■□□□□ 0.25
SNX3-203ENST00000368979 DEFB131BA0A096LNP1 70 aa16.59■□□□□ 0.25
SNX3-203ENST00000368979 A0A096LPF7 62 aa16.59■□□□□ 0.25
SNX3-203ENST00000368979 TIMM21Q9BVV7 248 aa16.59■□□□□ 0.25
SNX3-203ENST00000368979 DNAH9Q9NYC9 4486 aa16.58■□□□□ 0.25
SNX3-203ENST00000368979 IGLV4-3A0A075B6K6 122 aa16.58■□□□□ 0.24
SNX3-203ENST00000368979 NPSP0C0P6 89 aa16.58■□□□□ 0.24
SNX3-203ENST00000368979 NHLRC4P0CG21 123 aaPredicted RBP16.58■□□□□ 0.24
SNX3-203ENST00000368979 FAM104AQ969W3 186 aa16.58■□□□□ 0.24
SNX3-203ENST00000368979 A0A087WX48 190 aa16.57■□□□□ 0.24
SNX3-203ENST00000368979 SH2D6Q7Z4S9 175 aa16.57■□□□□ 0.24
SNX3-203ENST00000368979 ATOH7Q8N100 152 aa16.57■□□□□ 0.24
SNX3-203ENST00000368979 OPRPNQ99935 248 aaPredicted RBP16.57■□□□□ 0.24
SNX3-203ENST00000368979 H7C423 109 aa16.56■□□□□ 0.24
SNX3-203ENST00000368979 CEMP1Q6PRD7 247 aaPredicted RBP16.56■□□□□ 0.24
SNX3-203ENST00000368979 MRPL52Q86TS9 123 aaKnown RBP16.56■□□□□ 0.24
SNX3-203ENST00000368979 TRAV10A0A0B4J240 114 aa16.55■□□□□ 0.24
SNX3-203ENST00000368979 PMVKQ15126 192 aa16.55■□□□□ 0.24
SNX3-203ENST00000368979 FGF6P10767 208 aa16.55■□□□□ 0.24
SNX3-203ENST00000368979 MEGF8Q7Z7M0 2845 aa16.54■□□□□ 0.24
SNX3-203ENST00000368979 PRSS29PA6NIE9 313 aa16.54■□□□□ 0.24
SNX3-203ENST00000368979 S100A12P80511 92 aa16.54■□□□□ 0.24
SNX3-203ENST00000368979 CSDC2Q9Y534 153 aaKnown RBP16.54■□□□□ 0.24
SNX3-203ENST00000368979 UBE2L6O14933 153 aa16.53■□□□□ 0.24
SNX3-203ENST00000368979 MRPS36P82909 103 aaKnown RBP16.53■□□□□ 0.24
SNX3-203ENST00000368979 PAPPA-AS1Q5QFB9 102 aa16.53■□□□□ 0.24
SNX3-203ENST00000368979 ZC2HC1BQ5TFG8 222 aa16.53■□□□□ 0.24
SNX3-203ENST00000368979 CST9LQ9H4G1 147 aa16.53■□□□□ 0.24
SNX3-203ENST00000368979 MRPL35Q9NZE8 188 aaKnown RBP16.53■□□□□ 0.24
SNX3-203ENST00000368979 F8VRH5 84 aa16.52■□□□□ 0.24
SNX3-203ENST00000368979 SMAGPQ0VAQ4 97 aa16.52■□□□□ 0.24
SNX3-203ENST00000368979 AMELXQ99217 191 aa16.52■□□□□ 0.24
SNX3-203ENST00000368979 CHTOPQ9Y3Y2 248 aaKnown RBP16.52■□□□□ 0.24
SNX3-203ENST00000368979 Q6ZUT4 128 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms