RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 RNASE8Q8TDE3 154 aaKnown RBP13.69□□□□□ -0.22
SNX27-202ENST00000368841 WFDC10AQ9H1F0 79 aa13.69□□□□□ -0.22
SNX27-202ENST00000368841 SPANXDQ9BXN6 97 aa13.68□□□□□ -0.22
SNX27-202ENST00000368841 NDUFC2O95298 119 aa13.68□□□□□ -0.22
SNX27-202ENST00000368841 JMJD7-PLA2G4BH0Y9G9 81 aa13.67□□□□□ -0.22
SNX27-202ENST00000368841 C3orf84H3BNL1 204 aa13.67□□□□□ -0.22
SNX27-202ENST00000368841 BPY2O14599 106 aa13.67□□□□□ -0.22
SNX27-202ENST00000368841 MIAQ16674 131 aa13.67□□□□□ -0.22
SNX27-202ENST00000368841 C1orf229Q6ZS94 237 aaPredicted RBP13.67□□□□□ -0.22
SNX27-202ENST00000368841 C20orf203Q8NBC4 194 aa13.67□□□□□ -0.22
SNX27-202ENST00000368841 A0A0J9YXY3 114 aa13.67□□□□□ -0.22
SNX27-202ENST00000368841 A8MZ25 164 aa13.67□□□□□ -0.22
SNX27-202ENST00000368841 RETNQ9HD89 108 aa13.67□□□□□ -0.22
SNX27-202ENST00000368841 HILS1P60008 231 aa13.66□□□□□ -0.22
SNX27-202ENST00000368841 TEX49A0A1B0GTD5 131 aa13.66□□□□□ -0.22
SNX27-202ENST00000368841 C22orf34Q6ZV56 151 aa13.66□□□□□ -0.22
SNX27-202ENST00000368841 ENHOQ6UWT2 76 aa13.65□□□□□ -0.22
SNX27-202ENST00000368841 PLCE1Q9P212 2302 aa13.65□□□□□ -0.22
SNX27-202ENST00000368841 LOC100131303A0A0U1RQF7 123 aa13.65□□□□□ -0.22
SNX27-202ENST00000368841 RPL37AP8A6NKH3 93 aa13.65□□□□□ -0.22
SNX27-202ENST00000368841 LY6G6CO95867 125 aa13.65□□□□□ -0.22
SNX27-202ENST00000368841 NEXN-AS1Q8NBZ9 246 aa13.64□□□□□ -0.23
SNX27-202ENST00000368841 PCNX1Q96RV3 2341 aa13.64□□□□□ -0.23
SNX27-202ENST00000368841 NUP210LQ5VU65 1888 aa13.64□□□□□ -0.23
SNX27-202ENST00000368841 Q6YL49 198 aa13.64□□□□□ -0.23
SNX27-202ENST00000368841 C1orf158Q8N1D5 194 aa13.63□□□□□ -0.23
SNX27-202ENST00000368841 NCOA6Q14686 2063 aaPredicted RBP13.63□□□□□ -0.23
SNX27-202ENST00000368841 IGLV9-49A0A0B4J1Y8 123 aa13.62□□□□□ -0.23
SNX27-202ENST00000368841 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.62□□□□□ -0.23
SNX27-202ENST00000368841 Q8N976 141 aa13.62□□□□□ -0.23
SNX27-202ENST00000368841 PRORYQ9H606 182 aa13.62□□□□□ -0.23
SNX27-202ENST00000368841 MALRD1Q5VYJ5 2156 aa13.62□□□□□ -0.23
SNX27-202ENST00000368841 MED14OSP0DP75 135 aa13.62□□□□□ -0.23
SNX27-202ENST00000368841 KIAA1549Q9HCM3 1950 aa13.62□□□□□ -0.23
SNX27-202ENST00000368841 J3KT08 172 aa13.62□□□□□ -0.23
SNX27-202ENST00000368841 LY6G6DO95868 133 aa13.62□□□□□ -0.23
SNX27-202ENST00000368841 BBC3Q96PG8 261 aaPredicted RBP13.62□□□□□ -0.23
SNX27-202ENST00000368841 UBE2D1P51668 147 aa13.61□□□□□ -0.23
SNX27-202ENST00000368841 A0A0U1RQV1 116 aa13.61□□□□□ -0.23
SNX27-202ENST00000368841 USP17L23D6RBM5 183 aa13.61□□□□□ -0.23
SNX27-202ENST00000368841 DEFB114Q30KQ6 69 aa13.61□□□□□ -0.23
SNX27-202ENST00000368841 CDKN2A-AS1Q9UH64 79 aa13.61□□□□□ -0.23
SNX27-202ENST00000368841 SPATA12Q7Z6I5 190 aa13.6□□□□□ -0.23
SNX27-202ENST00000368841 C19orf71A6NCJ1 209 aa13.6□□□□□ -0.23
SNX27-202ENST00000368841 C3orf22Q8N5N4 141 aa13.6□□□□□ -0.23
SNX27-202ENST00000368841 H3BQ85 93 aa13.6□□□□□ -0.23
SNX27-202ENST00000368841 C14orf177Q52M58 125 aa13.6□□□□□ -0.23
SNX27-202ENST00000368841 UFSP1Q6NVU6 142 aa13.59□□□□□ -0.23
SNX27-202ENST00000368841 INSL3P51460 131 aa13.59□□□□□ -0.23
SNX27-202ENST00000368841 LMO4P61968 165 aa13.59□□□□□ -0.23
SNX27-202ENST00000368841 G3V4G9 280 aa13.58□□□□□ -0.24
SNX27-202ENST00000368841 PRR4Q16378 134 aa13.58□□□□□ -0.24
SNX27-202ENST00000368841 CFAP126Q5VTH2 177 aa13.58□□□□□ -0.24
SNX27-202ENST00000368841 HIGD1BQ9P298 99 aa13.58□□□□□ -0.24
SNX27-202ENST00000368841 UBE2D4Q9Y2X8 147 aa13.58□□□□□ -0.24
SNX27-202ENST00000368841 ODF3BA8MYP8 253 aa13.57□□□□□ -0.24
SNX27-202ENST00000368841 NDUFV3P56181 108 aaKnown RBP13.57□□□□□ -0.24
SNX27-202ENST00000368841 IGF2-ASQ6U949 168 aa13.57□□□□□ -0.24
SNX27-202ENST00000368841 C9orf85Q96MD7 179 aa13.57□□□□□ -0.24
SNX27-202ENST00000368841 TNFRSF13BO14836 293 aaPredicted RBP13.57□□□□□ -0.24
SNX27-202ENST00000368841 CLUHP3Q96NS8 147 aa13.57□□□□□ -0.24
SNX27-202ENST00000368841 C20orf197Q8N268 126 aa13.57□□□□□ -0.24
SNX27-202ENST00000368841 MT-ATP8P03928 68 aa13.56□□□□□ -0.24
SNX27-202ENST00000368841 SNURFQ9Y675 71 aa13.56□□□□□ -0.24
SNX27-202ENST00000368841 RETNLBQ9BQ08 111 aa13.55□□□□□ -0.24
SNX27-202ENST00000368841 NOTCH3Q9UM47 2321 aa13.55□□□□□ -0.24
SNX27-202ENST00000368841 WFDC13Q8IUB5 93 aa13.55□□□□□ -0.24
SNX27-202ENST00000368841 SMR3AQ99954 134 aa13.55□□□□□ -0.24
SNX27-202ENST00000368841 TMEM89A2RUT3 159 aa13.54□□□□□ -0.24
SNX27-202ENST00000368841 COA6Q5JTJ3 125 aaKnown RBP13.54□□□□□ -0.24
SNX27-202ENST00000368841 Q6ZSV7 163 aa13.54□□□□□ -0.24
SNX27-202ENST00000368841 IGLC6P0CF74 106 aa13.54□□□□□ -0.24
SNX27-202ENST00000368841 ZNF843Q8N446 348 aa13.54□□□□□ -0.24
SNX27-202ENST00000368841 TMEM223A0PJW6 202 aa13.54□□□□□ -0.24
SNX27-202ENST00000368841 IL17DQ8TAD2 202 aa13.54□□□□□ -0.24
SNX27-202ENST00000368841 IGLV4-3A0A075B6K6 122 aa13.53□□□□□ -0.24
SNX27-202ENST00000368841 MAPKAPK5-AS1Q8N8E1 139 aa13.53□□□□□ -0.24
SNX27-202ENST00000368841 SRCAPQ6ZRS2 3230 aa13.53□□□□□ -0.24
SNX27-202ENST00000368841 PCNX2A6NKB5 2137 aa13.53□□□□□ -0.24
SNX27-202ENST00000368841 IGLV2-8P01709 118 aa13.53□□□□□ -0.24
SNX27-202ENST00000368841 NANOS2P60321 138 aaKnown RBP13.53□□□□□ -0.24
SNX27-202ENST00000368841 LYRM9A8MSI8 78 aa13.52□□□□□ -0.24
SNX27-202ENST00000368841 Q6ZS46 218 aa13.52□□□□□ -0.24
SNX27-202ENST00000368841 SPANXCQ9NY87 97 aa13.52□□□□□ -0.24
SNX27-202ENST00000368841 UBE2D3P61077 147 aa13.52□□□□□ -0.24
SNX27-202ENST00000368841 POM121L12Q8N7R1 296 aa13.52□□□□□ -0.25
SNX27-202ENST00000368841 FAM30AQ9NZY2 134 aa13.52□□□□□ -0.25
SNX27-202ENST00000368841 TRBV6-8A0A0A6YYG3 113 aa13.51□□□□□ -0.25
SNX27-202ENST00000368841 H3BT86 120 aa13.51□□□□□ -0.25
SNX27-202ENST00000368841 C7orf33Q8WU49 177 aa13.51□□□□□ -0.25
SNX27-202ENST00000368841 Q6ZPA2 131 aa13.51□□□□□ -0.25
SNX27-202ENST00000368841 Q6ZSR3 168 aa13.51□□□□□ -0.25
SNX27-202ENST00000368841 SHANK1Q9Y566 2161 aa13.5□□□□□ -0.25
SNX27-202ENST00000368841 CRIP1P50238 77 aa13.5□□□□□ -0.25
SNX27-202ENST00000368841 K7EQG2 157 aa13.5□□□□□ -0.25
SNX27-202ENST00000368841 TRIAP1O43715 76 aa13.5□□□□□ -0.25
SNX27-202ENST00000368841 BRWD1-AS2P59051 145 aa13.5□□□□□ -0.25
SNX27-202ENST00000368841 C6orf99Q4VX62 202 aa13.49□□□□□ -0.25
SNX27-202ENST00000368841 LY6LH3BQJ8 138 aa13.49□□□□□ -0.25
SNX27-202ENST00000368841 ZNF22P17026 224 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms