RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 LEPROTO15243 131 aa10.04□□□□□ -0.8
PRKN-205ENST00000366897 ZFAND6Q6FIF0 208 aa10.04□□□□□ -0.8
PRKN-205ENST00000366897 VCX2Q9H322 139 aa10.04□□□□□ -0.8
PRKN-205ENST00000366897 KNCNA6PVL3 124 aa10.03□□□□□ -0.8
PRKN-205ENST00000366897 RPL32P62910 135 aaKnown RBP10.03□□□□□ -0.8
PRKN-205ENST00000366897 C20orf203Q8NBC4 194 aa10.03□□□□□ -0.8
PRKN-205ENST00000366897 IGLV4-3A0A075B6K6 122 aa10.03□□□□□ -0.8
PRKN-205ENST00000366897 A0A0J9YXY3 114 aa10.03□□□□□ -0.8
PRKN-205ENST00000366897 TEX29Q8N6K0 151 aa10.03□□□□□ -0.8
PRKN-205ENST00000366897 TRIAP1O43715 76 aa10.02□□□□□ -0.8
PRKN-205ENST00000366897 IGHG2P01859 326 aa10.02□□□□□ -0.8
PRKN-205ENST00000366897 USMG5Q96IX5 58 aa10.02□□□□□ -0.8
PRKN-205ENST00000366897 MYO9AB2RTY4 2548 aa10.02□□□□□ -0.81
PRKN-205ENST00000366897 LINC01620Q4KN68 170 aa10.02□□□□□ -0.81
PRKN-205ENST00000366897 ADAMTSL4-AS1Q5T5F5 129 aa10.02□□□□□ -0.81
PRKN-205ENST00000366897 C9orf85Q96MD7 179 aa10.02□□□□□ -0.81
PRKN-205ENST00000366897 B5MCH6 92 aa10.01□□□□□ -0.81
PRKN-205ENST00000366897 IGHV3-30-3P0DP02 117 aa10.01□□□□□ -0.81
PRKN-205ENST00000366897 ID1P41134 155 aa10.01□□□□□ -0.81
PRKN-205ENST00000366897 TRBV6-5A0A0K0K1A5 114 aa10.01□□□□□ -0.81
PRKN-205ENST00000366897 DAND5Q8N907 189 aa10.01□□□□□ -0.81
PRKN-205ENST00000366897 CD28P10747 220 aa10□□□□□ -0.81
PRKN-205ENST00000366897 PDZD2O15018 2839 aa10□□□□□ -0.81
PRKN-205ENST00000366897 NHLRC4P0CG21 123 aaPredicted RBP10□□□□□ -0.81
PRKN-205ENST00000366897 NSUN5P1Q3KNT7 163 aa10□□□□□ -0.81
PRKN-205ENST00000366897 CLEC2BQ92478 149 aa10□□□□□ -0.81
PRKN-205ENST00000366897 CITED1Q99966 193 aa10□□□□□ -0.81
PRKN-205ENST00000366897 IGHV1OR15-1A0A075B7D0 117 aa9.99□□□□□ -0.81
PRKN-205ENST00000366897 A0A0B4J2C4 111 aa9.99□□□□□ -0.81
PRKN-205ENST00000366897 TRBV7-9A0A0J9YWB2 115 aa9.99□□□□□ -0.81
PRKN-205ENST00000366897 I3L3M4 83 aa9.99□□□□□ -0.81
PRKN-205ENST00000366897 M0R2P5 195 aa9.99□□□□□ -0.81
PRKN-205ENST00000366897 TIMM21Q9BVV7 248 aa9.99□□□□□ -0.81
PRKN-205ENST00000366897 A0A0J9YX75 114 aa9.98□□□□□ -0.81
PRKN-205ENST00000366897 TMEM262E9PQX1 116 aa9.98□□□□□ -0.81
PRKN-205ENST00000366897 SNCGO76070 127 aa9.98□□□□□ -0.81
PRKN-205ENST00000366897 KRTAP10-9P60411 292 aa9.98□□□□□ -0.81
PRKN-205ENST00000366897 FAM104AQ969W3 186 aa9.98□□□□□ -0.81
PRKN-205ENST00000366897 CCDC168Q8NDH2 2452 aa9.98□□□□□ -0.81
PRKN-205ENST00000366897 A6NDX4 124 aa9.98□□□□□ -0.81
PRKN-205ENST00000366897 GAGE2BQ13066 116 aa9.98□□□□□ -0.81
PRKN-205ENST00000366897 RHOHQ15669 191 aa9.98□□□□□ -0.81
PRKN-205ENST00000366897 ATXN8Q156A1 80 aa9.98□□□□□ -0.81
PRKN-205ENST00000366897 GAGE2EQ4V326 116 aa9.98□□□□□ -0.81
PRKN-205ENST00000366897 GAGE2DQ9UEU5 116 aa9.98□□□□□ -0.81
PRKN-205ENST00000366897 LITAFQ99732 161 aa9.97□□□□□ -0.81
PRKN-205ENST00000366897 OTOGQ6ZRI0 2925 aa9.97□□□□□ -0.81
PRKN-205ENST00000366897 IGHV3-38A0A0C4DH36 116 aa9.97□□□□□ -0.81
PRKN-205ENST00000366897 AVPP01185 164 aa9.97□□□□□ -0.81
PRKN-205ENST00000366897 IGLV1-40P01703 118 aa9.97□□□□□ -0.81
PRKN-205ENST00000366897 RBMY1A1P0DJD3 496 aaKnown RBP9.97□□□□□ -0.81
PRKN-205ENST00000366897 RBMY1CP0DJD4 496 aa9.97□□□□□ -0.81
PRKN-205ENST00000366897 SYNJ2BPP57105 145 aa9.97□□□□□ -0.81
PRKN-205ENST00000366897 RBMY1FQ15415 496 aaKnown RBP9.97□□□□□ -0.81
PRKN-205ENST00000366897 A0A0U1RRA0 63 aa9.96□□□□□ -0.81
PRKN-205ENST00000366897 TTC32Q5I0X7 151 aa9.96□□□□□ -0.81
PRKN-205ENST00000366897 NDUFA12Q9UI09 145 aa9.96□□□□□ -0.81
PRKN-205ENST00000366897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.96□□□□□ -0.81
PRKN-205ENST00000366897 IGKV2-29A2NJV5 120 aaPredicted RBP9.96□□□□□ -0.81
PRKN-205ENST00000366897 C2orf82Q6UX34 121 aa9.96□□□□□ -0.81
PRKN-205ENST00000366897 TLN2Q9Y4G6 2542 aa9.96□□□□□ -0.82
PRKN-205ENST00000366897 C15orf53Q8NAA6 179 aa9.96□□□□□ -0.82
PRKN-205ENST00000366897 ODF3Q96PU9 254 aa9.96□□□□□ -0.82
PRKN-205ENST00000366897 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.95□□□□□ -0.82
PRKN-205ENST00000366897 TRAV8-4A0A0B4J246 113 aa9.95□□□□□ -0.82
PRKN-205ENST00000366897 CCDC179H3BU77 68 aa9.95□□□□□ -0.82
PRKN-205ENST00000366897 SNRPD3P62318 126 aaKnown RBP9.95□□□□□ -0.82
PRKN-205ENST00000366897 Q6ZSN1 163 aa9.95□□□□□ -0.82
PRKN-205ENST00000366897 WNK1Q9H4A3 2382 aa9.95□□□□□ -0.82
PRKN-205ENST00000366897 SETD2Q9BYW2 2564 aaPredicted RBP9.95□□□□□ -0.82
PRKN-205ENST00000366897 DUX3Q96PT4 197 aa9.95□□□□□ -0.82
PRKN-205ENST00000366897 ICOSQ9Y6W8 199 aa9.95□□□□□ -0.82
PRKN-205ENST00000366897 NDUFV3P56181 108 aaKnown RBP9.94□□□□□ -0.82
PRKN-205ENST00000366897 HIST2H2BDQ6DRA6 164 aa9.94□□□□□ -0.82
PRKN-205ENST00000366897 AKAP9Q99996 3911 aa9.94□□□□□ -0.82
PRKN-205ENST00000366897 MXRA5Q9NR99 2828 aa9.94□□□□□ -0.82
PRKN-205ENST00000366897 ANKRD17O75179 2603 aaKnown RBP9.94□□□□□ -0.82
PRKN-205ENST00000366897 H3BMM0 161 aa9.94□□□□□ -0.82
PRKN-205ENST00000366897 H7C423 109 aa9.94□□□□□ -0.82
PRKN-205ENST00000366897 UBE2WQ96B02 151 aa9.94□□□□□ -0.82
PRKN-205ENST00000366897 ZNF625Q96I27 306 aaPredicted RBP9.94□□□□□ -0.82
PRKN-205ENST00000366897 IGHV4-30-2A0A087WSY4 118 aa9.93□□□□□ -0.82
PRKN-205ENST00000366897 TRBV10-2A0A0K0K1G8 114 aa9.93□□□□□ -0.82
PRKN-205ENST00000366897 H3BUA1 57 aa9.93□□□□□ -0.82
PRKN-205ENST00000366897 IGHV4-59P01825 116 aa9.93□□□□□ -0.82
PRKN-205ENST00000366897 GAGE5Q13069 117 aa9.93□□□□□ -0.82
PRKN-205ENST00000366897 GAGE6Q13070 117 aa9.93□□□□□ -0.82
PRKN-205ENST00000366897 K7EQG2 157 aa9.93□□□□□ -0.82
PRKN-205ENST00000366897 NRGNQ92686 78 aa9.93□□□□□ -0.82
PRKN-205ENST00000366897 TRBV30A0A0K0K1B3 111 aa9.92□□□□□ -0.82
PRKN-205ENST00000366897 CFHR3Q02985 330 aa9.92□□□□□ -0.82
PRKN-205ENST00000366897 TNFRSF18Q9Y5U5 241 aa9.92□□□□□ -0.82
PRKN-205ENST00000366897 IGHV1-58A0A0C4DH39 117 aa9.91□□□□□ -0.82
PRKN-205ENST00000366897 K7EMT4 169 aa9.91□□□□□ -0.82
PRKN-205ENST00000366897 MRPS36P82909 103 aaKnown RBP9.91□□□□□ -0.82
PRKN-205ENST00000366897 C3orf56Q8N813 242 aa9.91□□□□□ -0.82
PRKN-205ENST00000366897 PSMB8P28062 276 aa9.91□□□□□ -0.82
PRKN-205ENST00000366897 RPL13AP40429 203 aaKnown RBP9.91□□□□□ -0.82
PRKN-205ENST00000366897 PIMREGQ9BSJ6 248 aa9.91□□□□□ -0.82
PRKN-205ENST00000366897 JMJD1CQ15652 2540 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms