RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 Q6YL49 198 aa10.9□□□□□ -0.67
PRKN-204ENST00000366896 A0A087WWL8 130 aa10.89□□□□□ -0.67
PRKN-204ENST00000366896 EIF4EBP3O60516 100 aaPredicted RBP10.89□□□□□ -0.67
PRKN-204ENST00000366896 IGHV3-33P01772 117 aa10.89□□□□□ -0.67
PRKN-204ENST00000366896 IGHV4-59P01825 116 aa10.89□□□□□ -0.67
PRKN-204ENST00000366896 SUMO4Q6EEV6 95 aa10.89□□□□□ -0.67
PRKN-204ENST00000366896 C9orf85Q96MD7 179 aa10.89□□□□□ -0.67
PRKN-204ENST00000366896 A4D1N5 150 aa10.89□□□□□ -0.67
PRKN-204ENST00000366896 NHLRC4P0CG21 123 aaPredicted RBP10.89□□□□□ -0.67
PRKN-204ENST00000366896 TMEM263Q8WUH6 116 aaKnown RBP10.89□□□□□ -0.67
PRKN-204ENST00000366896 RHODO00212 210 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 LGALS3P17931 250 aaKnown RBP10.88□□□□□ -0.67
PRKN-204ENST00000366896 TRPT1Q86TN4 253 aaKnown RBP10.88□□□□□ -0.67
PRKN-204ENST00000366896 RAX2Q96IS3 184 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 SS18L2Q9UHA2 77 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 TRAV12-3A0A0B4J271 114 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 P0DMU3 169 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 FAM231AP0DMU4 169 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 FAM231CP0DMU5 169 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 MXRA5Q9NR99 2828 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 HIVEP2P31629 2446 aa10.87□□□□□ -0.67
PRKN-204ENST00000366896 A0A0B4J2C4 111 aa10.87□□□□□ -0.67
PRKN-204ENST00000366896 PSMB8P28062 276 aa10.87□□□□□ -0.67
PRKN-204ENST00000366896 RNF152Q8N8N0 203 aa10.87□□□□□ -0.67
PRKN-204ENST00000366896 C10orf99Q6UWK7 81 aa10.87□□□□□ -0.67
PRKN-204ENST00000366896 LINC01600Q96MT4 127 aa10.86□□□□□ -0.67
PRKN-204ENST00000366896 IGHV3-16A0A0C4DH30 117 aa10.86□□□□□ -0.67
PRKN-204ENST00000366896 SDHAF1A6NFY7 115 aa10.86□□□□□ -0.67
PRKN-204ENST00000366896 RHOHQ15669 191 aa10.86□□□□□ -0.67
PRKN-204ENST00000366896 LEPROTO15243 131 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 IGKV3-20P01619 116 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 GAGE2BQ13066 116 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 GAGE2EQ4V326 116 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 GAGE2DQ9UEU5 116 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 VPREB3Q9UKI3 123 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 TRAV12-2A0A075B6T6 113 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 A0A0J9YX75 114 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 TMEM223A0PJW6 202 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 INAFM1C9JVW0 142 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 F5H697 171 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 SNCGO76070 127 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 NSUN5P1Q3KNT7 163 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 Q8N1Y9 231 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 TRAV4A0A0B4J268 109 aa10.84□□□□□ -0.67
PRKN-204ENST00000366896 B5MCH6 92 aa10.84□□□□□ -0.67
PRKN-204ENST00000366896 NDUFV3P56181 108 aaKnown RBP10.84□□□□□ -0.67
PRKN-204ENST00000366896 NTN5Q8WTR8 489 aaPredicted RBP10.84□□□□□ -0.67
PRKN-204ENST00000366896 F8P00451 2351 aa10.84□□□□□ -0.67
PRKN-204ENST00000366896 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
PRKN-204ENST00000366896 FAM74A4Q5TZK3 123 aa10.84□□□□□ -0.67
PRKN-204ENST00000366896 MUSTN1Q8IVN3 82 aa10.84□□□□□ -0.67
PRKN-204ENST00000366896 TRAV2A0A0B4J234 112 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 K7EQG2 157 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 CRLF1O75462 422 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 ATXN8Q156A1 80 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 LINC01620Q4KN68 170 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 MDFICQ9P1T7 246 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 MTORP42345 2549 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 M0QY20 66 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 ELANEP08246 267 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 RPL13AP40429 203 aaKnown RBP10.83□□□□□ -0.68
PRKN-204ENST00000366896 Q6Q795 121 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 TMEM86BQ8N661 226 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 ZNF256Q9Y2P7 627 aaPredicted RBP10.83□□□□□ -0.68
PRKN-204ENST00000366896 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.82□□□□□ -0.68
PRKN-204ENST00000366896 H7C2G1 150 aa10.82□□□□□ -0.68
PRKN-204ENST00000366896 EDA2RQ9HAV5 297 aa10.82□□□□□ -0.68
PRKN-204ENST00000366896 DUX5Q96PT3 197 aa10.82□□□□□ -0.68
PRKN-204ENST00000366896 IGHV1OR15-1A0A075B7D0 117 aa10.81□□□□□ -0.68
PRKN-204ENST00000366896 DNAJC9-AS1A6NH13 148 aa10.81□□□□□ -0.68
PRKN-204ENST00000366896 ESM1Q9NQ30 184 aa10.81□□□□□ -0.68
PRKN-204ENST00000366896 M0R2P5 195 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 ZNF22P17026 224 aaPredicted RBP10.8□□□□□ -0.68
PRKN-204ENST00000366896 OPRPNQ99935 248 aaPredicted RBP10.8□□□□□ -0.68
PRKN-204ENST00000366896 NSD1Q96L73 2696 aaPredicted RBP10.8□□□□□ -0.68
PRKN-204ENST00000366896 TRBV30A0A0K0K1B3 111 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 TRBV10-2A0A0K0K1G8 114 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 GAGE12JA6NER3 117 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 GAGE7O76087 117 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 GAGE12FP0CL80 117 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 GAGE12GP0CL81 117 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 GAGE12IP0CL82 117 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 IFITM1P13164 125 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 GAGE4Q13068 117 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 ZNF56Q15929 161 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 Q1RN00 199 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 FN1P02751 2386 aaKnown RBP10.79□□□□□ -0.68
PRKN-204ENST00000366896 TEX49A0A1B0GTD5 131 aa10.79□□□□□ -0.68
PRKN-204ENST00000366896 SPINK13Q1W4C9 94 aa10.79□□□□□ -0.68
PRKN-204ENST00000366896 TTC32Q5I0X7 151 aa10.79□□□□□ -0.68
PRKN-204ENST00000366896 TRAV8-4A0A0B4J246 113 aa10.79□□□□□ -0.68
PRKN-204ENST00000366896 TRGV11A0A075B6L2 103 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 C20orf203Q8NBC4 194 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 IGHV3-64A0A075B6Q5 118 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 A0A0J9YXY3 114 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 CCDC179H3BU77 68 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 TRIAP1O43715 76 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 HILS1P60008 231 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 H3BMM0 161 aa10.77□□□□□ -0.69
PRKN-204ENST00000366896 I3L3M4 83 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms