RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 IL5P05113 134 aa-0.22□□□□□ -2.44
RNU4-56P-201ENST00000364700 LZICQ8WZA0 190 aa-0.22□□□□□ -2.44
RNU4-56P-201ENST00000364700 TPT1P8Q9HAU6 139 aa-0.22□□□□□ -2.44
RNU4-56P-201ENST00000364700 LINC00312Q9Y6C7 94 aa-0.22□□□□□ -2.44
RNU4-56P-201ENST00000364700 TENM2Q9NT68 2774 aa-0.23□□□□□ -2.45
RNU4-56P-201ENST00000364700 HECTD4Q9Y4D8 3996 aa-0.23□□□□□ -2.45
RNU4-56P-201ENST00000364700 PRKDCP78527 4128 aaKnown RBP-0.23□□□□□ -2.45
RNU4-56P-201ENST00000364700 ARAP2Q8WZ64 1704 aa-0.23□□□□□ -2.45
RNU4-56P-201ENST00000364700 TRBV10-3A0A0K0K1G6 114 aa-0.23□□□□□ -2.45
RNU4-56P-201ENST00000364700 ZNF815PA8K554 130 aa-0.23□□□□□ -2.45
RNU4-56P-201ENST00000364700 NDUFA2O43678 99 aa-0.23□□□□□ -2.45
RNU4-56P-201ENST00000364700 SSBP3-AS1Q7Z2R9 100 aa-0.23□□□□□ -2.45
RNU4-56P-201ENST00000364700 LSM10Q969L4 123 aaKnown RBP-0.23□□□□□ -2.45
RNU4-56P-201ENST00000364700 SPTSSAQ969W0 71 aa-0.23□□□□□ -2.45
RNU4-56P-201ENST00000364700 PSMG3Q9BT73 122 aaPredicted RBP-0.23□□□□□ -2.45
RNU4-56P-201ENST00000364700 CYP4F30PQ9H0H9 118 aa-0.23□□□□□ -2.45
RNU4-56P-201ENST00000364700 PSME4Q14997 1843 aa-0.24□□□□□ -2.45
RNU4-56P-201ENST00000364700 TRAV1-2A0A0B4J238 106 aa-0.24□□□□□ -2.45
RNU4-56P-201ENST00000364700 APOC4-APOC2K7ER74 178 aa-0.24□□□□□ -2.45
RNU4-56P-201ENST00000364700 SIX6O95475 246 aa-0.24□□□□□ -2.45
RNU4-56P-201ENST00000364700 IFNA17P01571 189 aa-0.24□□□□□ -2.45
RNU4-56P-201ENST00000364700 GCHFRP30047 84 aa-0.24□□□□□ -2.45
RNU4-56P-201ENST00000364700 CCL18P55774 89 aa-0.24□□□□□ -2.45
RNU4-56P-201ENST00000364700 Q8N8P6 123 aa-0.24□□□□□ -2.45
RNU4-56P-201ENST00000364700 SPTSSBQ8NFR3 76 aa-0.24□□□□□ -2.45
RNU4-56P-201ENST00000364700 MUC12Q9UKN1 5478 aa-0.24□□□□□ -2.45
RNU4-56P-201ENST00000364700 ZANQ9Y493 2812 aa-0.24□□□□□ -2.45
RNU4-56P-201ENST00000364700 STAB1Q9NY15 2570 aa-0.25□□□□□ -2.45
RNU4-56P-201ENST00000364700 NEBP20929 6669 aa-0.25□□□□□ -2.45
RNU4-56P-201ENST00000364700 PIPP12273 146 aaPredicted RBP-0.25□□□□□ -2.45
RNU4-56P-201ENST00000364700 SMCO1Q147U7 214 aa-0.25□□□□□ -2.45
RNU4-56P-201ENST00000364700 S100A7L2Q5SY68 101 aa-0.25□□□□□ -2.45
RNU4-56P-201ENST00000364700 KCNRGQ8N5I3 272 aa-0.25□□□□□ -2.45
RNU4-56P-201ENST00000364700 AGPAT4-IT1Q9H0P7 198 aa-0.25□□□□□ -2.45
RNU4-56P-201ENST00000364700 SCP2D1Q9UJQ7 156 aa-0.25□□□□□ -2.45
RNU4-56P-201ENST00000364700 SHROOM2Q13796 1616 aa-0.25□□□□□ -2.45
RNU4-56P-201ENST00000364700 CSPG4Q6UVK1 2322 aa-0.25□□□□□ -2.45
RNU4-56P-201ENST00000364700 MAP1BP46821 2468 aaKnown RBP-0.26□□□□□ -2.45
RNU4-56P-201ENST00000364700 QRICH2Q9H0J4 1663 aa-0.26□□□□□ -2.45
RNU4-56P-201ENST00000364700 CFTRP13569 1480 aa-0.26□□□□□ -2.45
RNU4-56P-201ENST00000364700 BCL9LQ86UU0 1499 aa-0.26□□□□□ -2.45
RNU4-56P-201ENST00000364700 MBD5Q9P267 1494 aa-0.26□□□□□ -2.45
RNU4-56P-201ENST00000364700 HCG22E2RYF7 251 aa-0.26□□□□□ -2.45
RNU4-56P-201ENST00000364700 UBE2DNLQ8IWF7 75 aa-0.26□□□□□ -2.45
RNU4-56P-201ENST00000364700 FAM213BQ8TBF2 198 aa-0.26□□□□□ -2.45
RNU4-56P-201ENST00000364700 PAIP2BQ9ULR5 123 aaKnown RBP-0.26□□□□□ -2.45
RNU4-56P-201ENST00000364700 ALMS1Q8TCU4 4167 aa-0.26□□□□□ -2.45
RNU4-56P-201ENST00000364700 NHSL1Q5SYE7 1610 aa-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 MRC1P22897 1456 aa-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 SPTA1P02549 2419 aa-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 KMT2CQ8NEZ4 4911 aaKnown RBP-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 GOLGA4Q13439 2230 aaKnown RBP-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 PIN1P1O15428 100 aa-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 HIST1H1DP16402 221 aaKnown RBP-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 BAGE3Q86Y29 109 aa-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 TCEAL4Q96EI5 215 aa-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 PFDN5Q99471 154 aa-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 SNRNP25Q9BV90 132 aaKnown RBP-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 SEC11CQ9BY50 192 aa-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 CNFNQ9BYD5 112 aa-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 CCDC167Q9P0B6 97 aa-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 SBF2Q86WG5 1849 aa-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 LRP6O75581 1613 aa-0.27□□□□□ -2.45
RNU4-56P-201ENST00000364700 MAP1AP78559 2803 aaPredicted RBP-0.28□□□□□ -2.45
RNU4-56P-201ENST00000364700 WNK1Q9H4A3 2382 aa-0.28□□□□□ -2.45
RNU4-56P-201ENST00000364700 FAM92AA1XBS5 289 aa-0.28□□□□□ -2.45
RNU4-56P-201ENST00000364700 A6NIN4 97 aa-0.28□□□□□ -2.45
RNU4-56P-201ENST00000364700 ARPC4P59998 168 aa-0.28□□□□□ -2.45
RNU4-56P-201ENST00000364700 RPL7L1Q6DKI1 246 aaKnown RBP-0.28□□□□□ -2.45
RNU4-56P-201ENST00000364700 AMELXQ99217 191 aa-0.28□□□□□ -2.45
RNU4-56P-201ENST00000364700 LINC00470Q9BZP3 86 aa-0.28□□□□□ -2.45
RNU4-56P-201ENST00000364700 LINC00472Q9H8W2 130 aa-0.28□□□□□ -2.45
RNU4-56P-201ENST00000364700 LRRC37A2A6NM11 1700 aa-0.28□□□□□ -2.45
RNU4-56P-201ENST00000364700 PPRC1Q5VV67 1664 aaKnown RBP-0.28□□□□□ -2.45
RNU4-56P-201ENST00000364700 ROBO1Q9Y6N7 1651 aa-0.28□□□□□ -2.45
RNU4-56P-201ENST00000364700 SNCGO76070 127 aa-0.29□□□□□ -2.46
RNU4-56P-201ENST00000364700 SPINK8P0C7L1 97 aa-0.29□□□□□ -2.46
RNU4-56P-201ENST00000364700 SELENOWP63302 87 aa-0.29□□□□□ -2.46
RNU4-56P-201ENST00000364700 BTG2P78543 158 aa-0.29□□□□□ -2.46
RNU4-56P-201ENST00000364700 CFAP126Q5VTH2 177 aa-0.29□□□□□ -2.46
RNU4-56P-201ENST00000364700 Q6AWC8 147 aa-0.29□□□□□ -2.46
RNU4-56P-201ENST00000364700 RERGLQ9H628 205 aa-0.29□□□□□ -2.46
RNU4-56P-201ENST00000364700 MUC2Q02817 5179 aa-0.29□□□□□ -2.46
RNU4-56P-201ENST00000364700 SETXQ7Z333 2677 aaKnown RBP-0.29□□□□□ -2.46
RNU4-56P-201ENST00000364700 ZNF609O15014 1411 aa-0.3□□□□□ -2.46
RNU4-56P-201ENST00000364700 PCLOQ9Y6V0 5065 aa-0.3□□□□□ -2.46
RNU4-56P-201ENST00000364700 TRAV13-2A0A0B4J235 113 aa-0.3□□□□□ -2.46
RNU4-56P-201ENST00000364700 LOC100130705A0A1B0GUX0 176 aa-0.3□□□□□ -2.46
RNU4-56P-201ENST00000364700 K7EP13 123 aa-0.3□□□□□ -2.46
RNU4-56P-201ENST00000364700 RBM3P98179 157 aaKnown RBP-0.3□□□□□ -2.46
RNU4-56P-201ENST00000364700 SERP1Q9Y6X1 66 aa-0.3□□□□□ -2.46
RNU4-56P-201ENST00000364700 SRRM2Q9UQ35 2752 aaKnown RBP-0.3□□□□□ -2.46
RNU4-56P-201ENST00000364700 KIF21AQ7Z4S6 1674 aa-0.3□□□□□ -2.46
RNU4-56P-201ENST00000364700 RIMS1Q86UR5 1692 aaKnown RBP-0.3□□□□□ -2.46
RNU4-56P-201ENST00000364700 TCHHQ07283 1943 aa-0.3□□□□□ -2.46
RNU4-56P-201ENST00000364700 I3L2K1 104 aa-0.31□□□□□ -2.46
RNU4-56P-201ENST00000364700 M0R135 149 aa-0.31□□□□□ -2.46
RNU4-56P-201ENST00000364700 GNG7O60262 68 aa-0.31□□□□□ -2.46
RNU4-56P-201ENST00000364700 BCE1O60756 84 aa-0.31□□□□□ -2.46
RNU4-56P-201ENST00000364700 S100A12P80511 92 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms