RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 A0A0J9YXV3 536 aa11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 TMEM223A0PJW6 202 aa11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 LGALS3P17931 250 aaKnown RBP11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 RNF152Q8N8N0 203 aa11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 Q9UF83 564 aa11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 TEX15Q9BXT5 2789 aa11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 IGLV4-3A0A075B6K6 122 aa11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 Q6YL49 198 aa11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 LRRK2Q5S007 2527 aa11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 TRGV11A0A075B6L2 103 aa11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 J3QLI3 93 aa11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 ZNF22P17026 224 aaPredicted RBP11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 DEFB131AP59861 70 aa11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 PPDPFQ9H3Y8 114 aa11.39□□□□□ -0.59
CNKSR1-201ENST00000361530 PTPN13Q12923 2485 aa11.38□□□□□ -0.59
CNKSR1-201ENST00000361530 RBMY1BA6NDE4 496 aaKnown RBP11.38□□□□□ -0.59
CNKSR1-201ENST00000361530 RBMY1EA6NEQ0 496 aaKnown RBP11.38□□□□□ -0.59
CNKSR1-201ENST00000361530 RBMY1DP0C7P1 496 aaKnown RBP11.38□□□□□ -0.59
CNKSR1-201ENST00000361530 FAM104AQ969W3 186 aa11.38□□□□□ -0.59
CNKSR1-201ENST00000361530 C9JAW5 83 aa11.37□□□□□ -0.59
CNKSR1-201ENST00000361530 RHODO00212 210 aa11.37□□□□□ -0.59
CNKSR1-201ENST00000361530 HIST2H2BDQ6DRA6 164 aa11.37□□□□□ -0.59
CNKSR1-201ENST00000361530 DUX3Q96PT4 197 aa11.37□□□□□ -0.59
CNKSR1-201ENST00000361530 VCX2Q9H322 139 aa11.37□□□□□ -0.59
CNKSR1-201ENST00000361530 MYO9AB2RTY4 2548 aa11.37□□□□□ -0.59
CNKSR1-201ENST00000361530 TRAV2A0A0B4J234 112 aa11.37□□□□□ -0.59
CNKSR1-201ENST00000361530 LEPROTO15243 131 aa11.37□□□□□ -0.59
CNKSR1-201ENST00000361530 FSHBP01225 129 aa11.37□□□□□ -0.59
CNKSR1-201ENST00000361530 CEMP1Q6PRD7 247 aaPredicted RBP11.37□□□□□ -0.59
CNKSR1-201ENST00000361530 EIF4EBP3O60516 100 aaPredicted RBP11.36□□□□□ -0.59
CNKSR1-201ENST00000361530 NHLRC4P0CG21 123 aaPredicted RBP11.36□□□□□ -0.59
CNKSR1-201ENST00000361530 ABCA12Q86UK0 2595 aa11.36□□□□□ -0.59
CNKSR1-201ENST00000361530 H3BMM0 161 aa11.36□□□□□ -0.59
CNKSR1-201ENST00000361530 SLC25A20O43772 301 aa11.36□□□□□ -0.59
CNKSR1-201ENST00000361530 Q6ZSN1 163 aa11.36□□□□□ -0.59
CNKSR1-201ENST00000361530 ZNF462Q96JM2 2506 aa11.36□□□□□ -0.59
CNKSR1-201ENST00000361530 Q1RN00 199 aa11.35□□□□□ -0.59
CNKSR1-201ENST00000361530 IGHV4-31P0DP07 118 aa11.34□□□□□ -0.59
CNKSR1-201ENST00000361530 RNASE13Q5GAN3 156 aaKnown RBP11.34□□□□□ -0.59
CNKSR1-201ENST00000361530 SBSPONQ8IVN8 264 aa11.34□□□□□ -0.59
CNKSR1-201ENST00000361530 CUBNO60494 3623 aa11.34□□□□□ -0.59
CNKSR1-201ENST00000361530 PRB1P04280 392 aa11.34□□□□□ -0.59
CNKSR1-201ENST00000361530 TMEM61Q8N0U2 210 aa11.34□□□□□ -0.59
CNKSR1-201ENST00000361530 NACAE9PAV3 2078 aa11.34□□□□□ -0.59
CNKSR1-201ENST00000361530 ZNF469Q96JG9 3925 aaPredicted RBP11.33□□□□□ -0.6
CNKSR1-201ENST00000361530 NAV2Q8IVL1 2488 aa11.33□□□□□ -0.6
CNKSR1-201ENST00000361530 CD28P10747 220 aa11.33□□□□□ -0.6
CNKSR1-201ENST00000361530 KRTAP10-9P60411 292 aa11.33□□□□□ -0.6
CNKSR1-201ENST00000361530 C5orf47Q569G3 176 aa11.33□□□□□ -0.6
CNKSR1-201ENST00000361530 ZFAND6Q6FIF0 208 aa11.33□□□□□ -0.6
CNKSR1-201ENST00000361530 TEX29Q8N6K0 151 aa11.33□□□□□ -0.6
CNKSR1-201ENST00000361530 A8MTW9 85 aa11.32□□□□□ -0.6
CNKSR1-201ENST00000361530 ADARB2-AS1A8MUL3 147 aa11.32□□□□□ -0.6
CNKSR1-201ENST00000361530 TMEM262E9PQX1 116 aa11.32□□□□□ -0.6
CNKSR1-201ENST00000361530 CCDC179H3BU77 68 aa11.32□□□□□ -0.6
CNKSR1-201ENST00000361530 IGHV3-33P01772 117 aa11.32□□□□□ -0.6
CNKSR1-201ENST00000361530 MUSTN1Q8IVN3 82 aa11.32□□□□□ -0.6
CNKSR1-201ENST00000361530 EDA2RQ9HAV5 297 aa11.32□□□□□ -0.6
CNKSR1-201ENST00000361530 CR1P17927 2039 aa11.32□□□□□ -0.6
CNKSR1-201ENST00000361530 TRAV25A0A0B4J276 109 aa11.31□□□□□ -0.6
CNKSR1-201ENST00000361530 PYGO1Q9Y3Y4 419 aa11.31□□□□□ -0.6
CNKSR1-201ENST00000361530 TRAV8-3A0A0A6YYJ7 113 aa11.31□□□□□ -0.6
CNKSR1-201ENST00000361530 M0R2P5 195 aa11.31□□□□□ -0.6
CNKSR1-201ENST00000361530 TLN2Q9Y4G6 2542 aa11.31□□□□□ -0.6
CNKSR1-201ENST00000361530 IGHV3-30-3P0DP02 117 aa11.3□□□□□ -0.6
CNKSR1-201ENST00000361530 AKAP9Q99996 3911 aa11.3□□□□□ -0.6
CNKSR1-201ENST00000361530 A0A0J9YXY3 114 aa11.3□□□□□ -0.6
CNKSR1-201ENST00000361530 NTN5Q8WTR8 489 aaPredicted RBP11.3□□□□□ -0.6
CNKSR1-201ENST00000361530 TMEM263Q8WUH6 116 aaKnown RBP11.3□□□□□ -0.6
CNKSR1-201ENST00000361530 CSDC2Q9Y534 153 aaKnown RBP11.3□□□□□ -0.6
CNKSR1-201ENST00000361530 MRPS36P82909 103 aaKnown RBP11.29□□□□□ -0.6
CNKSR1-201ENST00000361530 CHD6Q8TD26 2715 aa11.29□□□□□ -0.6
CNKSR1-201ENST00000361530 CHCHD7Q9BUK0 85 aa11.29□□□□□ -0.6
CNKSR1-201ENST00000361530 MAP6D1Q9H9H5 199 aa11.29□□□□□ -0.6
CNKSR1-201ENST00000361530 KHDC1LQ5JSQ8 128 aa11.28□□□□□ -0.6
CNKSR1-201ENST00000361530 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.28□□□□□ -0.6
CNKSR1-201ENST00000361530 IGKV2-29A2NJV5 120 aaPredicted RBP11.28□□□□□ -0.6
CNKSR1-201ENST00000361530 C11orf72Q8NBR9 251 aa11.28□□□□□ -0.6
CNKSR1-201ENST00000361530 TIMM21Q9BVV7 248 aa11.28□□□□□ -0.6
CNKSR1-201ENST00000361530 PRRC2AP48634 2157 aaKnown RBP11.28□□□□□ -0.6
CNKSR1-201ENST00000361530 IGHV3-38A0A0C4DH36 116 aa11.27□□□□□ -0.6
CNKSR1-201ENST00000361530 A8MZ25 164 aa11.27□□□□□ -0.6
CNKSR1-201ENST00000361530 PRSS2P07478 247 aa11.27□□□□□ -0.6
CNKSR1-201ENST00000361530 LINC01587Q99440 93 aa11.27□□□□□ -0.6
CNKSR1-201ENST00000361530 EPG5Q9HCE0 2579 aa11.27□□□□□ -0.6
CNKSR1-201ENST00000361530 USP24Q9UPU5 2620 aa11.27□□□□□ -0.61
CNKSR1-201ENST00000361530 GAGE12JA6NER3 117 aa11.27□□□□□ -0.61
CNKSR1-201ENST00000361530 SNCGO76070 127 aa11.27□□□□□ -0.61
CNKSR1-201ENST00000361530 GAGE7O76087 117 aa11.27□□□□□ -0.61
CNKSR1-201ENST00000361530 GAGE12FP0CL80 117 aa11.27□□□□□ -0.61
CNKSR1-201ENST00000361530 GAGE12GP0CL81 117 aa11.27□□□□□ -0.61
CNKSR1-201ENST00000361530 GAGE12IP0CL82 117 aa11.27□□□□□ -0.61
CNKSR1-201ENST00000361530 ZNF415Q09FC8 603 aa11.27□□□□□ -0.61
CNKSR1-201ENST00000361530 GAGE4Q13068 117 aa11.27□□□□□ -0.61
CNKSR1-201ENST00000361530 Q8N2B8 174 aa11.27□□□□□ -0.61
CNKSR1-201ENST00000361530 LITAFQ99732 161 aa11.27□□□□□ -0.61
CNKSR1-201ENST00000361530 UBE2D4Q9Y2X8 147 aa11.26□□□□□ -0.61
CNKSR1-201ENST00000361530 A0A0B4J2C4 111 aa11.26□□□□□ -0.61
CNKSR1-201ENST00000361530 GAGE2BQ13066 116 aa11.26□□□□□ -0.61
CNKSR1-201ENST00000361530 ATXN8Q156A1 80 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms