RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 TMEM97Q5BJF2 176 aa8.53□□□□□ -1.04
NIF3L1-201ENST00000359683 NTM-AS1Q6ZSK4 140 aa8.53□□□□□ -1.04
NIF3L1-201ENST00000359683 SMIM2Q9BVW6 85 aa8.53□□□□□ -1.04
NIF3L1-201ENST00000359683 MAP1LC3AQ9H492 121 aa8.53□□□□□ -1.04
NIF3L1-201ENST00000359683 LINC00588Q9Y4M8 146 aa8.53□□□□□ -1.04
NIF3L1-201ENST00000359683 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.04
NIF3L1-201ENST00000359683 TNP2Q05952 138 aa8.52□□□□□ -1.05
NIF3L1-201ENST00000359683 LELP1Q5T871 98 aa8.52□□□□□ -1.05
NIF3L1-201ENST00000359683 ALMS1Q8TCU4 4167 aa8.52□□□□□ -1.05
NIF3L1-201ENST00000359683 TRBV6-8A0A0A6YYG3 113 aa8.51□□□□□ -1.05
NIF3L1-201ENST00000359683 LOC389332A0A1B0GUA5 103 aa8.51□□□□□ -1.05
NIF3L1-201ENST00000359683 COTL1Q14019 142 aa8.51□□□□□ -1.05
NIF3L1-201ENST00000359683 Q8N8P6 123 aa8.51□□□□□ -1.05
NIF3L1-201ENST00000359683 MRPS16Q9Y3D3 137 aaKnown RBP8.51□□□□□ -1.05
NIF3L1-201ENST00000359683 TSHBP01222 138 aa8.51□□□□□ -1.05
NIF3L1-201ENST00000359683 IQCJQ1A5X6 159 aa8.51□□□□□ -1.05
NIF3L1-201ENST00000359683 LGALS9CQ6DKI2 356 aa8.51□□□□□ -1.05
NIF3L1-201ENST00000359683 C18orf32Q8TCD1 76 aa8.51□□□□□ -1.05
NIF3L1-201ENST00000359683 DEFB104AQ8WTQ1 72 aa8.51□□□□□ -1.05
NIF3L1-201ENST00000359683 UPK3BQ9BT76 320 aa8.51□□□□□ -1.05
NIF3L1-201ENST00000359683 NXT2Q9NPJ8 142 aaKnown RBP8.51□□□□□ -1.05
NIF3L1-201ENST00000359683 HYDINQ4G0P3 5121 aa8.5□□□□□ -1.05
NIF3L1-201ENST00000359683 KIR2DL4Q99706 377 aa8.5□□□□□ -1.05
NIF3L1-201ENST00000359683 IGHV1-24A0A0C4DH33 117 aa8.49□□□□□ -1.05
NIF3L1-201ENST00000359683 TCAPO15273 167 aa8.49□□□□□ -1.05
NIF3L1-201ENST00000359683 ESDP10768 282 aa8.49□□□□□ -1.05
NIF3L1-201ENST00000359683 IFI27P40305 119 aaPredicted RBP8.49□□□□□ -1.05
NIF3L1-201ENST00000359683 KRTAP4-8Q9BYQ9 185 aa8.49□□□□□ -1.05
NIF3L1-201ENST00000359683 TRBV25-1A0A075B6N4 114 aa8.48□□□□□ -1.05
NIF3L1-201ENST00000359683 TRAV8-6A0A0B4J262 113 aa8.48□□□□□ -1.05
NIF3L1-201ENST00000359683 K7EMI3 77 aa8.48□□□□□ -1.05
NIF3L1-201ENST00000359683 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
NIF3L1-201ENST00000359683 PRSS3P2Q8NHM4 247 aa8.48□□□□□ -1.05
NIF3L1-201ENST00000359683 CHCHD7Q9BUK0 85 aa8.48□□□□□ -1.05
NIF3L1-201ENST00000359683 VPS13DQ5THJ4 4388 aa8.48□□□□□ -1.05
NIF3L1-201ENST00000359683 LINC01546A6NGU7 62 aa8.47□□□□□ -1.05
NIF3L1-201ENST00000359683 FCER1GP30273 86 aa8.47□□□□□ -1.05
NIF3L1-201ENST00000359683 AMTP48728 403 aa8.47□□□□□ -1.05
NIF3L1-201ENST00000359683 Q0VG73 95 aa8.47□□□□□ -1.05
NIF3L1-201ENST00000359683 UBE2DNLQ8IWF7 75 aa8.47□□□□□ -1.05
NIF3L1-201ENST00000359683 TMEM243Q9BU79 118 aa8.47□□□□□ -1.05
NIF3L1-201ENST00000359683 NIT1Q86X76 327 aa8.47□□□□□ -1.05
NIF3L1-201ENST00000359683 WFDC10BQ8IUB3 73 aa8.47□□□□□ -1.05
NIF3L1-201ENST00000359683 LINC00476Q8WZB0 136 aa8.47□□□□□ -1.05
NIF3L1-201ENST00000359683 URB1-AS1Q96HZ7 61 aa8.47□□□□□ -1.05
NIF3L1-201ENST00000359683 Q9H8V8 135 aa8.47□□□□□ -1.05
NIF3L1-201ENST00000359683 GHRHP01286 108 aa8.46□□□□□ -1.06
NIF3L1-201ENST00000359683 LINC00614P0C842 121 aa8.46□□□□□ -1.06
NIF3L1-201ENST00000359683 CHCHD5Q9BSY4 110 aa8.46□□□□□ -1.06
NIF3L1-201ENST00000359683 H7C423 109 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 SIVA1O15304 175 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 HIST1H2BKO60814 126 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 HIST1H2BJP06899 126 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 HIST1H2BOP23527 126 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 HIST1H2BBP33778 126 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 HIST1H2BDP58876 126 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 HIST1H2BCP62807 126 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 LAGE3Q14657 143 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 HIST2H2BEQ16778 126 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 XP32Q5T750 250 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 FA2HQ7L5A8 372 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 C20orf203Q8NBC4 194 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 HIST1H2BHQ93079 126 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 HIST1H2BNQ99877 126 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 HIST1H2BMQ99879 126 aa8.45□□□□□ -1.06
NIF3L1-201ENST00000359683 C1orf196B1AJZ1 125 aa8.44□□□□□ -1.06
NIF3L1-201ENST00000359683 LY6G6CO95867 125 aa8.44□□□□□ -1.06
NIF3L1-201ENST00000359683 DNAH10OSP0CZ25 163 aa8.44□□□□□ -1.06
NIF3L1-201ENST00000359683 RAB5BP61020 215 aa8.44□□□□□ -1.06
NIF3L1-201ENST00000359683 ORMDL2Q53FV1 153 aa8.44□□□□□ -1.06
NIF3L1-201ENST00000359683 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
NIF3L1-201ENST00000359683 IGKV2-29A2NJV5 120 aaPredicted RBP8.43□□□□□ -1.06
NIF3L1-201ENST00000359683 PKIAP61925 76 aa8.43□□□□□ -1.06
NIF3L1-201ENST00000359683 GAGE6Q13070 117 aa8.43□□□□□ -1.06
NIF3L1-201ENST00000359683 LINC01556Q5JQF7 62 aa8.43□□□□□ -1.06
NIF3L1-201ENST00000359683 BAGE3Q86Y29 109 aa8.43□□□□□ -1.06
NIF3L1-201ENST00000359683 A0A1B0GUV1 79 aa8.43□□□□□ -1.06
NIF3L1-201ENST00000359683 TMEM262E9PQX1 116 aa8.43□□□□□ -1.06
NIF3L1-201ENST00000359683 UBE2L6O14933 153 aa8.43□□□□□ -1.06
NIF3L1-201ENST00000359683 TMEM18Q96B42 140 aa8.43□□□□□ -1.06
NIF3L1-201ENST00000359683 AP5S1Q9NUS5 200 aa8.43□□□□□ -1.06
NIF3L1-201ENST00000359683 G0S2P27469 103 aa8.42□□□□□ -1.06
NIF3L1-201ENST00000359683 MRPL52Q86TS9 123 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-201ENST00000359683 CHCHD1Q96BP2 118 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-201ENST00000359683 A0A087WX48 190 aa8.41□□□□□ -1.06
NIF3L1-201ENST00000359683 FGF6P10767 208 aa8.41□□□□□ -1.06
NIF3L1-201ENST00000359683 LINC00310P59036 64 aa8.41□□□□□ -1.06
NIF3L1-201ENST00000359683 RBX1P62877 108 aa8.41□□□□□ -1.06
NIF3L1-201ENST00000359683 RPL39P62891 51 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-201ENST00000359683 MPV17L2Q567V2 206 aa8.41□□□□□ -1.06
NIF3L1-201ENST00000359683 RNASEKQ6P5S7 137 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-201ENST00000359683 Q8N3U1 123 aa8.41□□□□□ -1.06
NIF3L1-201ENST00000359683 TIMM21Q9BVV7 248 aa8.41□□□□□ -1.06
NIF3L1-201ENST00000359683 K7EP13 123 aa8.4□□□□□ -1.06
NIF3L1-201ENST00000359683 IGHV3-30P01768 117 aa8.4□□□□□ -1.06
NIF3L1-201ENST00000359683 IGHV3-33P01772 117 aa8.4□□□□□ -1.06
NIF3L1-201ENST00000359683 IGHV3-30-3P0DP02 117 aa8.4□□□□□ -1.06
NIF3L1-201ENST00000359683 IGHV3-30-5P0DP03 117 aa8.4□□□□□ -1.06
NIF3L1-201ENST00000359683 C2orf66Q6UXQ4 117 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms