RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 RBMY1DP0C7P1 496 aaKnown RBP10.47□□□□□ -0.73
NIPAL3-203ENST00000358028 PCP4P48539 62 aa10.47□□□□□ -0.73
NIPAL3-203ENST00000358028 TMEM238LA0A1B0GVL6 79 aa10.46□□□□□ -0.74
NIPAL3-203ENST00000358028 C11orf86A6NJI1 115 aa10.46□□□□□ -0.74
NIPAL3-203ENST00000358028 A6NJY4 79 aa10.46□□□□□ -0.74
NIPAL3-203ENST00000358028 ZNF815PA8K554 130 aa10.46□□□□□ -0.74
NIPAL3-203ENST00000358028 MORN3Q6PF18 240 aaPredicted RBP10.46□□□□□ -0.74
NIPAL3-203ENST00000358028 VPS25Q9BRG1 176 aa10.46□□□□□ -0.74
NIPAL3-203ENST00000358028 MAP6D1Q9H9H5 199 aa10.46□□□□□ -0.74
NIPAL3-203ENST00000358028 DEFB114Q30KQ6 69 aa10.45□□□□□ -0.74
NIPAL3-203ENST00000358028 ZNF876PQ49A33 203 aa10.45□□□□□ -0.74
NIPAL3-203ENST00000358028 ZNF479Q96JC4 524 aa10.45□□□□□ -0.74
NIPAL3-203ENST00000358028 RRN3P1Q2M238 152 aa10.44□□□□□ -0.74
NIPAL3-203ENST00000358028 PIK3CD-AS1Q5SR53 167 aa10.44□□□□□ -0.74
NIPAL3-203ENST00000358028 CITED2Q99967 270 aaPredicted RBP10.44□□□□□ -0.74
NIPAL3-203ENST00000358028 RPL39P62891 51 aaKnown RBP10.44□□□□□ -0.74
NIPAL3-203ENST00000358028 NFE4Q86UQ8 179 aa10.44□□□□□ -0.74
NIPAL3-203ENST00000358028 PTH2Q96A98 100 aa10.44□□□□□ -0.74
NIPAL3-203ENST00000358028 I3L3M4 83 aa10.43□□□□□ -0.74
NIPAL3-203ENST00000358028 SCGB1D4Q6XE38 83 aa10.43□□□□□ -0.74
NIPAL3-203ENST00000358028 RAX2Q96IS3 184 aa10.43□□□□□ -0.74
NIPAL3-203ENST00000358028 ADARB2-AS1A8MUL3 147 aa10.42□□□□□ -0.74
NIPAL3-203ENST00000358028 G3V4G9 280 aa10.42□□□□□ -0.74
NIPAL3-203ENST00000358028 CD300EQ496F6 205 aaPredicted RBP10.42□□□□□ -0.74
NIPAL3-203ENST00000358028 DEFB104AQ8WTQ1 72 aa10.42□□□□□ -0.74
NIPAL3-203ENST00000358028 SPAG8Q99932 426 aaPredicted RBP10.42□□□□□ -0.74
NIPAL3-203ENST00000358028 F8W1H4 67 aa10.42□□□□□ -0.74
NIPAL3-203ENST00000358028 C20orf203Q8NBC4 194 aa10.42□□□□□ -0.74
NIPAL3-203ENST00000358028 SPANXB1Q9NS25 103 aaPredicted RBP10.42□□□□□ -0.74
NIPAL3-203ENST00000358028 A0A1W2PRX2 142 aa10.41□□□□□ -0.74
NIPAL3-203ENST00000358028 HTN1P15515 57 aa10.41□□□□□ -0.74
NIPAL3-203ENST00000358028 ZNF415Q09FC8 603 aa10.41□□□□□ -0.74
NIPAL3-203ENST00000358028 FHL3Q13643 280 aa10.41□□□□□ -0.74
NIPAL3-203ENST00000358028 LINC00467Q9BRT7 94 aa10.41□□□□□ -0.74
NIPAL3-203ENST00000358028 TRAV25A0A0B4J276 109 aa10.4□□□□□ -0.74
NIPAL3-203ENST00000358028 SAP30O75446 220 aa10.4□□□□□ -0.74
NIPAL3-203ENST00000358028 NDUFA11Q86Y39 141 aa10.4□□□□□ -0.74
NIPAL3-203ENST00000358028 A8MWV9 139 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 UBE2D1P51668 147 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 CRYBA4P53673 196 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 SRSF9Q13242 221 aaKnown RBP eCLIP10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 A0A0J9YY99 117 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 M0R2P5 195 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 CCL24O00175 119 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 INSP01308 110 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 P0DMU3 169 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 FAM231AP0DMU4 169 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 FAM231CP0DMU5 169 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 TMEM170BQ5T4T1 132 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 ZNRF2Q8NHG8 242 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 PLEKHB2Q96CS7 222 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 PYGO1Q9Y3Y4 419 aa10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 TSSC4Q9Y5U2 329 aaPredicted RBP10.39□□□□□ -0.75
NIPAL3-203ENST00000358028 CLUHP3Q96NS8 147 aa10.38□□□□□ -0.75
NIPAL3-203ENST00000358028 LEPROTO15243 131 aa10.37□□□□□ -0.75
NIPAL3-203ENST00000358028 PRM2P04554 102 aa10.37□□□□□ -0.75
NIPAL3-203ENST00000358028 ODF3L2Q3SX64 289 aa10.37□□□□□ -0.75
NIPAL3-203ENST00000358028 SLC25A29Q8N8R3 303 aa10.37□□□□□ -0.75
NIPAL3-203ENST00000358028 LINC01587Q99440 93 aa10.37□□□□□ -0.75
NIPAL3-203ENST00000358028 IGHV3-73A0A0B4J1V6 119 aa10.37□□□□□ -0.75
NIPAL3-203ENST00000358028 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
NIPAL3-203ENST00000358028 J3QQQ9 107 aa10.37□□□□□ -0.75
NIPAL3-203ENST00000358028 LGALS3P17931 250 aaKnown RBP10.37□□□□□ -0.75
NIPAL3-203ENST00000358028 EMP1P54849 157 aa10.37□□□□□ -0.75
NIPAL3-203ENST00000358028 SORL1Q92673 2214 aa10.36□□□□□ -0.75
NIPAL3-203ENST00000358028 RHODO00212 210 aa10.36□□□□□ -0.75
NIPAL3-203ENST00000358028 LYRM7Q5U5X0 104 aa10.36□□□□□ -0.75
NIPAL3-203ENST00000358028 C11orf72Q8NBR9 251 aa10.36□□□□□ -0.75
NIPAL3-203ENST00000358028 AMELXQ99217 191 aa10.36□□□□□ -0.75
NIPAL3-203ENST00000358028 SPXQ9BT56 116 aa10.36□□□□□ -0.75
NIPAL3-203ENST00000358028 VCX2Q9H322 139 aa10.36□□□□□ -0.75
NIPAL3-203ENST00000358028 NOTCH1P46531 2555 aa10.36□□□□□ -0.75
NIPAL3-203ENST00000358028 IGLV4-3A0A075B6K6 122 aa10.35□□□□□ -0.75
NIPAL3-203ENST00000358028 MRPL16Q9NX20 251 aaKnown RBP10.35□□□□□ -0.75
NIPAL3-203ENST00000358028 PGPEP1Q9NXJ5 209 aa10.35□□□□□ -0.75
NIPAL3-203ENST00000358028 WIPF1O43516 503 aa10.34□□□□□ -0.75
NIPAL3-203ENST00000358028 TSPEAR-AS2P59090 65 aa10.34□□□□□ -0.75
NIPAL3-203ENST00000358028 TNFRSF18Q9Y5U5 241 aa10.34□□□□□ -0.75
NIPAL3-203ENST00000358028 IGHV3-30P01768 117 aa10.34□□□□□ -0.75
NIPAL3-203ENST00000358028 IGHV3-30-5P0DP03 117 aa10.34□□□□□ -0.75
NIPAL3-203ENST00000358028 ZNF22P17026 224 aaPredicted RBP10.34□□□□□ -0.75
NIPAL3-203ENST00000358028 RPL24P83731 157 aaKnown RBP10.34□□□□□ -0.75
NIPAL3-203ENST00000358028 GAGE13Q4V321 117 aa10.34□□□□□ -0.75
NIPAL3-203ENST00000358028 CFAP126Q5VTH2 177 aa10.34□□□□□ -0.75
NIPAL3-203ENST00000358028 STHQ8IWL8 128 aa10.34□□□□□ -0.75
NIPAL3-203ENST00000358028 DNAJC30Q96LL9 226 aa10.34□□□□□ -0.75
NIPAL3-203ENST00000358028 H3BMG7 143 aa10.33□□□□□ -0.76
NIPAL3-203ENST00000358028 J3QR89 54 aa10.33□□□□□ -0.76
NIPAL3-203ENST00000358028 C21orf62-AS1Q17RA5 79 aa10.33□□□□□ -0.76
NIPAL3-203ENST00000358028 BEAN1Q3B7T3 259 aa10.33□□□□□ -0.76
NIPAL3-203ENST00000358028 COTL1Q14019 142 aa10.32□□□□□ -0.76
NIPAL3-203ENST00000358028 OPRPNQ99935 248 aaPredicted RBP10.32□□□□□ -0.76
NIPAL3-203ENST00000358028 SPANXA1Q9NS26 97 aa10.32□□□□□ -0.76
NIPAL3-203ENST00000358028 XCL2Q9UBD3 114 aa10.32□□□□□ -0.76
NIPAL3-203ENST00000358028 PRO0461Q9UI25 63 aa10.32□□□□□ -0.76
NIPAL3-203ENST00000358028 TEX48A0A1B0GUV7 120 aa10.31□□□□□ -0.76
NIPAL3-203ENST00000358028 RS1O15537 224 aa10.31□□□□□ -0.76
NIPAL3-203ENST00000358028 TSPAN13O95857 204 aa10.31□□□□□ -0.76
NIPAL3-203ENST00000358028 Q6ZSN1 163 aa10.31□□□□□ -0.76
NIPAL3-203ENST00000358028 PRKDCP78527 4128 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms