RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 PLCE1Q9P212 2302 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 DENND4AQ7Z401 1863 aa4.35□□□□□ -1.71
BRCA1-203ENST00000357654 MSMPQ1L6U9 139 aa4.35□□□□□ -1.71
BRCA1-203ENST00000357654 Q6ZSV7 163 aa4.35□□□□□ -1.71
BRCA1-203ENST00000357654 C15orf65H3BRN8 121 aa4.35□□□□□ -1.71
BRCA1-203ENST00000357654 WISP3O95389 354 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-203ENST00000357654 SMIM9A6NGZ8 99 aa4.35□□□□□ -1.71
BRCA1-203ENST00000357654 PYGO1Q9Y3Y4 419 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 NDUFC2-KCTD14E9PQ53 114 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 C6orf99Q4VX62 202 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 SPINT4Q6UDR6 99 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 TTTY13Q9BZ97 58 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 FREM3P0C091 2139 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 MIAQ16674 131 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 DEFB114Q30KQ6 69 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 REG3GQ6UW15 175 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 C11orf53Q8IXP5 236 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 HTTP42858 3142 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 DHRS4-AS1Q9P1J3 65 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 CACNA1EQ15878 2313 aa4.34□□□□□ -1.71
BRCA1-203ENST00000357654 ZNF73O43830 326 aaPredicted RBP4.34□□□□□ -1.72
BRCA1-203ENST00000357654 Q6ZQY7 126 aa4.34□□□□□ -1.72
BRCA1-203ENST00000357654 LRRC75A-AS1Q8N1F1 130 aa4.34□□□□□ -1.72
BRCA1-203ENST00000357654 PRM2P04554 102 aa4.34□□□□□ -1.72
BRCA1-203ENST00000357654 DOCK4Q8N1I0 1966 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 IGLV1-44P01699 117 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 IGLV8-61A0A075B6I0 122 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 IGLV11-55A0A075B6I3 123 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 A0A0J9YX75 114 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 PARP14Q460N5 1801 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 SCN5AQ14524 2016 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 PDE6GP18545 87 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 TOMM6Q96B49 74 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 NCKAP5O14513 1909 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 I3L2K1 104 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 K7EN84 100 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 TSC2P49815 1807 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 TRBV6-8A0A0A6YYG3 113 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 M0R378 163 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 Q8N7P7 452 aa4.33□□□□□ -1.72
BRCA1-203ENST00000357654 TRIOBPQ9H2D6 2365 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 SPTA1P02549 2419 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 TRBV30A0A0K0K1B3 111 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 C11orf86A6NJI1 115 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 U3KQA8 63 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 TICRRQ7Z2Z1 1910 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 CACNA1DQ01668 2161 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 hDV103S1A0JD37 113 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 C19orf71A6NCJ1 209 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 RNASE3P12724 160 aaKnown RBP4.32□□□□□ -1.72
BRCA1-203ENST00000357654 BTCP35070 178 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 LIMD2Q9BT23 127 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 A0A0J9YXY3 114 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 K7EIM0 57 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 IGLV3-1P01715 115 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 CRYGAP11844 174 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 USF3Q68DE3 2245 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 HEATR5AQ86XA9 2040 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 GREB1Q4ZG55 1949 aa4.32□□□□□ -1.72
BRCA1-203ENST00000357654 LINC00173Q6ZV60 143 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 LINC00208Q96KT6 92 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 Q9BRP9 147 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 SPANXB1Q9NS25 103 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-203ENST00000357654 PTH2Q96A98 100 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 ZNF726P1Q15940 193 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 NEXN-AS1Q8NBZ9 246 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 NDUFS6O75380 124 aaKnown RBP4.31□□□□□ -1.72
BRCA1-203ENST00000357654 CFAP126Q5VTH2 177 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 C20orf144Q9BQM9 153 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 TRBV6-5A0A0K0K1A5 114 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 FAM19A3Q7Z5A8 133 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 Q8NA96 180 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 GOLGB1Q14789 3259 aaKnown RBP4.31□□□□□ -1.72
BRCA1-203ENST00000357654 LENEPQ9Y5L5 61 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 BPTFQ12830 3046 aa4.31□□□□□ -1.72
BRCA1-203ENST00000357654 LRRC37A2A6NM11 1700 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 PROK2Q9HC23 129 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 WDR81Q562E7 1941 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 A0A1B0GXF2 115 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 COLCA2A8K830 154 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 LINC01006Q8NI28 216 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 V9GYY9 64 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 A8MZ25 164 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 ADCYAP1P18509 176 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 SPANXCQ9NY87 97 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 LINC01547P58512 204 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-203ENST00000357654 COX6A2Q02221 97 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 GDF5OSQ5U4N7 250 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 Q6ZTC4 211 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 ZNF747Q9BV97 191 aa4.3□□□□□ -1.72
BRCA1-203ENST00000357654 KIAA1671Q9BY89 1806 aa4.29□□□□□ -1.72
BRCA1-203ENST00000357654 LELP1Q5T871 98 aa4.29□□□□□ -1.72
BRCA1-203ENST00000357654 Q9UF83 564 aa4.29□□□□□ -1.72
BRCA1-203ENST00000357654 C17orf82Q86X59 251 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-203ENST00000357654 H3BT86 120 aa4.29□□□□□ -1.72
BRCA1-203ENST00000357654 DOCK3Q8IZD9 2030 aa4.29□□□□□ -1.72
BRCA1-203ENST00000357654 TNFRSF13BO14836 293 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-203ENST00000357654 CHTF8P0CG12 524 aa4.29□□□□□ -1.72
BRCA1-203ENST00000357654 WFDC2Q14508 124 aa4.29□□□□□ -1.72
BRCA1-203ENST00000357654 LINC01545Q5VT33 79 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms