RNA–Protein interactions for RNA: ENST00000357246.3

MAP1LC3C-201, Transcript of microtubule associated protein 1 light chain 3 gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3C, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3C-201ENST00000357246 FOXA3P55318 350 aaPredicted RBP5.67□□□□□ -1.5
MAP1LC3C-201ENST00000357246 DAZ4Q86SG3 579 aaKnown RBP5.67□□□□□ -1.5
MAP1LC3C-201ENST00000357246 BOD1L2Q8IYS8 172 aa5.67□□□□□ -1.5
MAP1LC3C-201ENST00000357246 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.67□□□□□ -1.5
MAP1LC3C-201ENST00000357246 DNAJC30Q96LL9 226 aa5.67□□□□□ -1.5
MAP1LC3C-201ENST00000357246 CHCHD7Q9BUK0 85 aa5.67□□□□□ -1.5
MAP1LC3C-201ENST00000357246 TM2D2Q9BX73 214 aa5.67□□□□□ -1.5
MAP1LC3C-201ENST00000357246 DAZ3Q9NR90 486 aaKnown RBP5.67□□□□□ -1.5
MAP1LC3C-201ENST00000357246 PKHD1P08F94 4074 aa5.67□□□□□ -1.5
MAP1LC3C-201ENST00000357246 KIAA1109Q2LD37 5005 aa5.67□□□□□ -1.5
MAP1LC3C-201ENST00000357246 LRCOL1A6NCL2 159 aa5.66□□□□□ -1.5
MAP1LC3C-201ENST00000357246 H7C1H1 209 aa5.66□□□□□ -1.5
MAP1LC3C-201ENST00000357246 SNAPINO95295 136 aa5.66□□□□□ -1.5
MAP1LC3C-201ENST00000357246 S100A1P23297 94 aa5.66□□□□□ -1.5
MAP1LC3C-201ENST00000357246 CTRLP40313 264 aa5.66□□□□□ -1.5
MAP1LC3C-201ENST00000357246 TMEM97Q5BJF2 176 aa5.66□□□□□ -1.5
MAP1LC3C-201ENST00000357246 Q8N3U1 123 aa5.66□□□□□ -1.5
MAP1LC3C-201ENST00000357246 DPH3P1Q9H4G8 78 aa5.66□□□□□ -1.5
MAP1LC3C-201ENST00000357246 DYNC1H1Q14204 4646 aaKnown RBP5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 DNAH11Q96DT5 4516 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 ZNF727A8MUV8 499 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 FAM229AH3BQW9 127 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 PSCAO43653 123 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 ELOBQ15370 118 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 TWIST1Q15672 202 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 SUMO4Q6EEV6 95 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 RASL11AQ6T310 242 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 NTM-AS1Q6ZSK4 140 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 LINC01551Q86U37 167 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 GTSF1Q8WW33 167 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 SMIM7Q9BQ49 75 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 SMDT1Q9H4I9 107 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 Q9HAA7 133 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 NIT2Q9NQR4 276 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 COX11Q9Y6N1 276 aa5.65□□□□□ -1.5
MAP1LC3C-201ENST00000357246 A0A087WX48 190 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 FAM231BA6NCW3 169 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 TMEM262E9PQX1 116 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 HSBP1O75506 76 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 MGPP08493 103 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 PKIAP61925 76 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 Q0VG73 95 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 PNRC1Q12796 327 aaPredicted RBP5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 PEA15Q15121 130 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 TMEM241Q24JQ0 296 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 COX19Q49B96 90 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 FAM74A3Q4VXF1 159 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 FRZBQ92765 325 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 GFRA4Q9GZZ7 299 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 OSTCQ9NRP0 149 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 KLK12Q9UKR0 248 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 PLA2G2DQ9UNK4 145 aa5.64□□□□□ -1.51
MAP1LC3C-201ENST00000357246 C9JQL5 133 aa5.63□□□□□ -1.51
MAP1LC3C-201ENST00000357246 IFITM2Q01629 132 aa5.63□□□□□ -1.51
MAP1LC3C-201ENST00000357246 IQCJQ1A5X6 159 aa5.63□□□□□ -1.51
MAP1LC3C-201ENST00000357246 ATRAIDQ6UW56 229 aa5.63□□□□□ -1.51
MAP1LC3C-201ENST00000357246 NTN5Q8WTR8 489 aaPredicted RBP5.63□□□□□ -1.51
MAP1LC3C-201ENST00000357246 TSKUQ8WUA8 353 aa5.63□□□□□ -1.51
MAP1LC3C-201ENST00000357246 RMI2Q96E14 147 aa5.63□□□□□ -1.51
MAP1LC3C-201ENST00000357246 PACRGQ96M98 296 aaPredicted RBP5.63□□□□□ -1.51
MAP1LC3C-201ENST00000357246 TRBV25-1A0A075B6N4 114 aa5.62□□□□□ -1.51
MAP1LC3C-201ENST00000357246 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
MAP1LC3C-201ENST00000357246 TMEM238C9JI98 176 aa5.62□□□□□ -1.51
MAP1LC3C-201ENST00000357246 SMIM15Q7Z3B0 74 aa5.62□□□□□ -1.51
MAP1LC3C-201ENST00000357246 Q8N814 137 aa5.62□□□□□ -1.51
MAP1LC3C-201ENST00000357246 MAPKAPK5-AS1Q8N8E1 139 aa5.62□□□□□ -1.51
MAP1LC3C-201ENST00000357246 C15orf54Q8N8G6 183 aa5.62□□□□□ -1.51
MAP1LC3C-201ENST00000357246 GATD1Q8NB37 220 aa5.62□□□□□ -1.51
MAP1LC3C-201ENST00000357246 PGLYRP4Q96LB8 373 aa5.62□□□□□ -1.51
MAP1LC3C-201ENST00000357246 CHCHD5Q9BSY4 110 aa5.62□□□□□ -1.51
MAP1LC3C-201ENST00000357246 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
MAP1LC3C-201ENST00000357246 IGHV1-24A0A0C4DH33 117 aa5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 A0A1B0GUT8 65 aa5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 A0A1B0GUV1 79 aa5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 HIGD1CA8MV81 97 aa5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 FUSP35637 526 aaKnown RBP eCLIP5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 RPL13AP40429 203 aaKnown RBP5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 RPL23P62829 140 aaKnown RBP5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 SRSF3P84103 164 aaKnown RBP5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 MPV17L2Q567V2 206 aa5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 CLLU1Q5K131 121 aa5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 ENHOQ6UWT2 76 aa5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 ISOC2Q96AB3 205 aa5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 UBE2WQ96B02 151 aa5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 NAT8Q9UHE5 227 aa5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 V9GYV3 84 aa5.61□□□□□ -1.51
MAP1LC3C-201ENST00000357246 M0QXV9 152 aa5.6□□□□□ -1.51
MAP1LC3C-201ENST00000357246 ANGP03950 147 aaKnown RBP5.6□□□□□ -1.51
MAP1LC3C-201ENST00000357246 KRTAP10-1P60331 282 aa5.6□□□□□ -1.51
MAP1LC3C-201ENST00000357246 RBX1P62877 108 aa5.6□□□□□ -1.51
MAP1LC3C-201ENST00000357246 Q8N976 141 aa5.6□□□□□ -1.51
MAP1LC3C-201ENST00000357246 BORCS7Q96B45 105 aa5.6□□□□□ -1.51
MAP1LC3C-201ENST00000357246 TMEM191AQ9H0A3 160 aa5.6□□□□□ -1.51
MAP1LC3C-201ENST00000357246 PRR34Q9NV39 138 aa5.6□□□□□ -1.51
MAP1LC3C-201ENST00000357246 IGKV2D-24A0A075B6R9 120 aa5.59□□□□□ -1.51
MAP1LC3C-201ENST00000357246 IGLV5-52A0A0A0MRZ9 124 aa5.59□□□□□ -1.51
MAP1LC3C-201ENST00000357246 TRAV26-2A0A0B4J265 109 aa5.59□□□□□ -1.51
MAP1LC3C-201ENST00000357246 XGP55808 180 aa5.59□□□□□ -1.51
MAP1LC3C-201ENST00000357246 GAGE6Q13070 117 aa5.59□□□□□ -1.51
MAP1LC3C-201ENST00000357246 WFDC2Q14508 124 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms