RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 C18orf15Q96N68 181 aa2.8□□□□□ -1.96
LIG4-201ENST00000356922 IMMP2LQ96T52 175 aa2.8□□□□□ -1.96
LIG4-201ENST00000356922 GFRA4Q9GZZ7 299 aa2.8□□□□□ -1.96
LIG4-201ENST00000356922 PKD1P98161 4303 aa2.8□□□□□ -1.96
LIG4-201ENST00000356922 DNAH11Q96DT5 4516 aa2.8□□□□□ -1.96
LIG4-201ENST00000356922 EPPK1P58107 5090 aaKnown RBP2.8□□□□□ -1.96
LIG4-201ENST00000356922 LY6G6CO95867 125 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 CRYBA4P53673 196 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 CCL18P55774 89 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 HBBP68871 147 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 OCIAD2Q56VL3 154 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 OR10J3Q5JRS4 329 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 GATD1Q8NB37 220 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 RPL39LQ96EH5 51 aaKnown RBP2.79□□□□□ -1.96
LIG4-201ENST00000356922 PRO0255Q9UI72 69 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 DNAH17Q9UFH2 4485 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 A0A087WWC5 75 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 TRAV4A0A0B4J268 109 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 FAM231BA6NCW3 169 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 NCR2O95944 276 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 MED14OSP0DP75 135 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 FCER1GP30273 86 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 KIAA1644Q3SXP7 199 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 ZNRF2Q8NHG8 242 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 PTH2Q96A98 100 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 MIEN1Q9BRT3 115 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 DPH3P1Q9H4G8 78 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 TMEM242Q9NWH2 141 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 M0QY20 66 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 UBE2L6O14933 153 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 GHRHP01286 108 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 RHOHQ15669 191 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 MRPL23Q16540 153 aaKnown RBP2.79□□□□□ -1.96
LIG4-201ENST00000356922 SUMO4Q6EEV6 95 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 CEMP1Q6PRD7 247 aaPredicted RBP2.79□□□□□ -1.96
LIG4-201ENST00000356922 Q8N3U1 123 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 ICOSQ9Y6W8 199 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 ALMS1Q8TCU4 4167 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 HECTD4Q9Y4D8 3996 aa2.79□□□□□ -1.96
LIG4-201ENST00000356922 LOC389332A0A1B0GUA5 103 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 K7EQD1 137 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 PMCHP20382 165 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 DGAT2L7PQ6IED9 249 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 TMEM136Q6ZRR5 245 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 NEGR1Q7Z3B1 354 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 APLNQ9ULZ1 77 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 IGHV3-38A0A0C4DH36 116 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 MRPL51Q4U2R6 128 aaKnown RBP2.78□□□□□ -1.96
LIG4-201ENST00000356922 AMMECR1LQ6DCA0 310 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 CHCHD5Q9BSY4 110 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 CST9LQ9H4G1 147 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 TRAPPC1Q9Y5R8 145 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 A0A087WX48 190 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 APCSP02743 223 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 TNP2Q05952 138 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 ODF1Q14990 250 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 ESRGQ1W209 222 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 FAM104BQ5XKR9 115 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 NEXN-AS1Q8NBZ9 246 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 PRSS3P2Q8NHM4 247 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 VAMP8Q9BV40 100 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 TMEM191AQ9H0A3 160 aa2.78□□□□□ -1.96
LIG4-201ENST00000356922 TRAV8-6A0A0B4J262 113 aa2.78□□□□□ -1.97
LIG4-201ENST00000356922 IGKV3OR2-268A0A0C4DH90 116 aa2.78□□□□□ -1.97
LIG4-201ENST00000356922 A0A1B0GW15 77 aa2.78□□□□□ -1.97
LIG4-201ENST00000356922 PIK3CD-AS1Q5SR53 167 aa2.78□□□□□ -1.97
LIG4-201ENST00000356922 NTM-AS1Q6ZSK4 140 aa2.78□□□□□ -1.97
LIG4-201ENST00000356922 NRACQ8N912 160 aa2.78□□□□□ -1.97
LIG4-201ENST00000356922 KIR2DL4Q99706 377 aa2.78□□□□□ -1.97
LIG4-201ENST00000356922 ST20Q9HBF5 79 aa2.78□□□□□ -1.97
LIG4-201ENST00000356922 HNRNPA3P51991 378 aaKnown RBP2.77□□□□□ -1.97
LIG4-201ENST00000356922 RNASEKQ6P5S7 137 aaKnown RBP2.77□□□□□ -1.97
LIG4-201ENST00000356922 ZFP2Q6ZN57 461 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 ATP6V0E2Q8NHE4 81 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 D6R8Y8 96 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 LINC00694P0DN24 101 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 RASL11AQ6T310 242 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 C15orf53Q8NAA6 179 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 DNAJC30Q96LL9 226 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 PAM16Q9Y3D7 125 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 IGLV2-18A0A075B6J9 118 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 TRBV24-1A0A075B6N3 115 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 TRBV6-4A0A1B0GX49 114 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 H0Y8G0 127 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 PPP1R17O96001 155 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 NPYP01303 97 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 BAGE3Q86Y29 109 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 ORMDL3Q8N138 153 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 MTURNQ8N3F0 131 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 PRELID3AQ96N28 172 aa2.77□□□□□ -1.97
LIG4-201ENST00000356922 C3orf84H3BNL1 204 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 M0R2N4 97 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 HLA-DQA1P01909 254 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 LYPD5Q6UWN5 251 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 FA2HQ7L5A8 372 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 NIT1Q86X76 327 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 LINC00588Q9Y4M8 146 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 COX11Q9Y6N1 276 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 DNAH5Q8TE73 4624 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 TRBV7-3A0A075B6L6 115 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 263.4 ms