RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 DEFA6Q01524 100 aa12.75□□□□□ -0.37
SMARCD3-202ENST00000356800 C2orf66Q6UXQ4 117 aa12.75□□□□□ -0.37
SMARCD3-202ENST00000356800 ZMAT4Q9H898 229 aa12.75□□□□□ -0.37
SMARCD3-202ENST00000356800 CRYBA4P53673 196 aa12.74□□□□□ -0.37
SMARCD3-202ENST00000356800 RPL36AP83881 106 aaKnown RBP12.74□□□□□ -0.37
SMARCD3-202ENST00000356800 ZNRF2Q8NHG8 242 aa12.74□□□□□ -0.37
SMARCD3-202ENST00000356800 RPL36ALQ969Q0 106 aaKnown RBP12.74□□□□□ -0.37
SMARCD3-202ENST00000356800 PRKDCP78527 4128 aaKnown RBP12.74□□□□□ -0.37
SMARCD3-202ENST00000356800 CYSLTR1Q9Y271 337 aa12.73□□□□□ -0.37
SMARCD3-202ENST00000356800 GAGE12JA6NER3 117 aa12.73□□□□□ -0.37
SMARCD3-202ENST00000356800 GAGE1Q13065 139 aa12.73□□□□□ -0.37
SMARCD3-202ENST00000356800 GAGE4Q13068 117 aa12.73□□□□□ -0.37
SMARCD3-202ENST00000356800 GAGE5Q13069 117 aa12.73□□□□□ -0.37
SMARCD3-202ENST00000356800 GAGE13Q4V321 117 aa12.73□□□□□ -0.37
SMARCD3-202ENST00000356800 TEX43Q6ZNM6 134 aa12.73□□□□□ -0.37
SMARCD3-202ENST00000356800 PRO0255Q9UI72 69 aa12.73□□□□□ -0.37
SMARCD3-202ENST00000356800 C20orf202A1L168 122 aa12.72□□□□□ -0.37
SMARCD3-202ENST00000356800 HTN3P15516 51 aa12.72□□□□□ -0.37
SMARCD3-202ENST00000356800 UBE2D3P61077 147 aa12.72□□□□□ -0.37
SMARCD3-202ENST00000356800 UBE2D2P62837 147 aa12.72□□□□□ -0.37
SMARCD3-202ENST00000356800 LINC01545Q5VT33 79 aa12.72□□□□□ -0.37
SMARCD3-202ENST00000356800 DAZ4Q86SG3 579 aaKnown RBP12.72□□□□□ -0.37
SMARCD3-202ENST00000356800 PRADC1Q9BSG0 188 aa12.72□□□□□ -0.37
SMARCD3-202ENST00000356800 DAZ3Q9NR90 486 aaKnown RBP12.72□□□□□ -0.37
SMARCD3-202ENST00000356800 IGHV3-38A0A0C4DH36 116 aa12.71□□□□□ -0.37
SMARCD3-202ENST00000356800 F5H768 121 aa12.71□□□□□ -0.37
SMARCD3-202ENST00000356800 LINC00694P0DN24 101 aa12.71□□□□□ -0.37
SMARCD3-202ENST00000356800 NANOS2P60321 138 aaKnown RBP12.71□□□□□ -0.37
SMARCD3-202ENST00000356800 S100A12P80511 92 aa12.71□□□□□ -0.37
SMARCD3-202ENST00000356800 Q6ZTC4 211 aa12.71□□□□□ -0.37
SMARCD3-202ENST00000356800 ERASQ7Z444 233 aa12.71□□□□□ -0.37
SMARCD3-202ENST00000356800 PHLDA1Q8WV24 401 aaPredicted RBP12.71□□□□□ -0.37
SMARCD3-202ENST00000356800 VSIG2Q96IQ7 327 aa12.71□□□□□ -0.37
SMARCD3-202ENST00000356800 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.7□□□□□ -0.38
SMARCD3-202ENST00000356800 C20orf203Q8NBC4 194 aa12.7□□□□□ -0.38
SMARCD3-202ENST00000356800 C11orf45Q8TAV5 145 aa12.7□□□□□ -0.38
SMARCD3-202ENST00000356800 SCGB3A1Q96QR1 104 aa12.7□□□□□ -0.38
SMARCD3-202ENST00000356800 COTL1Q14019 142 aa12.7□□□□□ -0.38
SMARCD3-202ENST00000356800 H0Y8G0 127 aa12.69□□□□□ -0.38
SMARCD3-202ENST00000356800 PAX4O43316 350 aa12.69□□□□□ -0.38
SMARCD3-202ENST00000356800 GYPEP15421 78 aa12.69□□□□□ -0.38
SMARCD3-202ENST00000356800 LGALS9CQ6DKI2 356 aa12.69□□□□□ -0.38
SMARCD3-202ENST00000356800 TRAV26-1A0A087WT03 109 aa12.68□□□□□ -0.38
SMARCD3-202ENST00000356800 A0A0J9YY99 117 aa12.68□□□□□ -0.38
SMARCD3-202ENST00000356800 IGIPA6NJ69 53 aa12.68□□□□□ -0.38
SMARCD3-202ENST00000356800 TIMM17AQ99595 171 aa12.68□□□□□ -0.38
SMARCD3-202ENST00000356800 PRSS1P07477 247 aa12.67□□□□□ -0.38
SMARCD3-202ENST00000356800 RPL39P62891 51 aaKnown RBP12.67□□□□□ -0.38
SMARCD3-202ENST00000356800 Q6ZN92 141 aa12.67□□□□□ -0.38
SMARCD3-202ENST00000356800 TMEM141Q96I45 108 aa12.67□□□□□ -0.38
SMARCD3-202ENST00000356800 CHCHD7Q9BUK0 85 aa12.67□□□□□ -0.38
SMARCD3-202ENST00000356800 TRAV12-1A0A0B4J245 112 aa12.65□□□□□ -0.38
SMARCD3-202ENST00000356800 NTM-AS1Q6ZSK4 140 aa12.65□□□□□ -0.38
SMARCD3-202ENST00000356800 GTSF1LQ9H1H1 148 aa12.65□□□□□ -0.38
SMARCD3-202ENST00000356800 STAB2Q8WWQ8 2551 aa12.65□□□□□ -0.39
SMARCD3-202ENST00000356800 NHLRC4P0CG21 123 aaPredicted RBP12.64□□□□□ -0.39
SMARCD3-202ENST00000356800 ODF1Q14990 250 aa12.64□□□□□ -0.39
SMARCD3-202ENST00000356800 VAMP8Q9BV40 100 aa12.64□□□□□ -0.39
SMARCD3-202ENST00000356800 PYGO1Q9Y3Y4 419 aa12.64□□□□□ -0.39
SMARCD3-202ENST00000356800 ATOH7Q8N100 152 aa12.64□□□□□ -0.39
SMARCD3-202ENST00000356800 ZNF664Q8N3J9 261 aa12.64□□□□□ -0.39
SMARCD3-202ENST00000356800 BAALCQ8WXS3 180 aa12.64□□□□□ -0.39
SMARCD3-202ENST00000356800 PMCHL2Q9BQD1 86 aa12.64□□□□□ -0.39
SMARCD3-202ENST00000356800 TRAV9-2A0A087WT02 112 aa12.63□□□□□ -0.39
SMARCD3-202ENST00000356800 NPSP0C0P6 89 aa12.63□□□□□ -0.39
SMARCD3-202ENST00000356800 A0A087WX48 190 aa12.62□□□□□ -0.39
SMARCD3-202ENST00000356800 DEFB131BA0A096LNP1 70 aa12.61□□□□□ -0.39
SMARCD3-202ENST00000356800 ATP6V0E2Q8NHE4 81 aa12.61□□□□□ -0.39
SMARCD3-202ENST00000356800 SPANXA1Q9NS26 97 aa12.61□□□□□ -0.39
SMARCD3-202ENST00000356800 A0A096LPF7 62 aa12.61□□□□□ -0.39
SMARCD3-202ENST00000356800 TMEM97Q5BJF2 176 aa12.61□□□□□ -0.39
SMARCD3-202ENST00000356800 PAM16Q9Y3D7 125 aa12.61□□□□□ -0.39
SMARCD3-202ENST00000356800 PKIAP61925 76 aa12.6□□□□□ -0.39
SMARCD3-202ENST00000356800 UBE2D4Q9Y2X8 147 aa12.6□□□□□ -0.39
SMARCD3-202ENST00000356800 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.59□□□□□ -0.39
SMARCD3-202ENST00000356800 IGKV2-29A2NJV5 120 aaPredicted RBP12.59□□□□□ -0.39
SMARCD3-202ENST00000356800 PRSS29PA6NIE9 313 aa12.59□□□□□ -0.39
SMARCD3-202ENST00000356800 PAPPA-AS1Q5QFB9 102 aa12.59□□□□□ -0.39
SMARCD3-202ENST00000356800 TIMM21Q9BVV7 248 aa12.59□□□□□ -0.39
SMARCD3-202ENST00000356800 MRPL35Q9NZE8 188 aaKnown RBP12.59□□□□□ -0.39
SMARCD3-202ENST00000356800 F8VRH5 84 aa12.58□□□□□ -0.4
SMARCD3-202ENST00000356800 H3BNG1 76 aa12.58□□□□□ -0.4
SMARCD3-202ENST00000356800 PMVKQ15126 192 aa12.58□□□□□ -0.4
SMARCD3-202ENST00000356800 MRPL23Q16540 153 aaKnown RBP12.58□□□□□ -0.4
SMARCD3-202ENST00000356800 MAJINQ3KP22 176 aa12.58□□□□□ -0.4
SMARCD3-202ENST00000356800 ICOSQ9Y6W8 199 aa12.58□□□□□ -0.4
SMARCD3-202ENST00000356800 IGLV4-3A0A075B6K6 122 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 TRBV25-1A0A075B6N4 114 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 TRAV10A0A0B4J240 114 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 TSTD3H0UI37 97 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 DPM2O94777 84 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 SPATA45Q537H7 98 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 CST9LQ9H4G1 147 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 CHTOPQ9Y3Y2 248 aaKnown RBP12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 HSBP1L1C9JCN9 74 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 H7C423 109 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 IGKCP01834 107 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 PLNP26678 52 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 FAM104AQ969W3 186 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms