RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 UBL5Q9BZL1 73 aa10.72□□□□□ -0.69
SREBF1-202ENST00000355815 SUMO4Q6EEV6 95 aa10.72□□□□□ -0.69
SREBF1-202ENST00000355815 DEFB112Q30KQ8 113 aa10.71□□□□□ -0.69
SREBF1-202ENST00000355815 CCDC140Q96MF4 163 aa10.71□□□□□ -0.69
SREBF1-202ENST00000355815 PEMTQ9UBM1 199 aa10.71□□□□□ -0.69
SREBF1-202ENST00000355815 FBXL19-AS1Q494R0 122 aa10.71□□□□□ -0.7
SREBF1-202ENST00000355815 CLPSL2Q6UWE3 100 aa10.71□□□□□ -0.7
SREBF1-202ENST00000355815 TMEM190Q8WZ59 177 aa10.71□□□□□ -0.7
SREBF1-202ENST00000355815 AJUBAQ96IF1 538 aa10.71□□□□□ -0.7
SREBF1-202ENST00000355815 DNAJC30Q96LL9 226 aa10.71□□□□□ -0.7
SREBF1-202ENST00000355815 Q9HAA7 133 aa10.71□□□□□ -0.7
SREBF1-202ENST00000355815 C5orf56Q8N8D9 126 aa10.7□□□□□ -0.7
SREBF1-202ENST00000355815 TRBV10-2A0A0K0K1G8 114 aa10.7□□□□□ -0.7
SREBF1-202ENST00000355815 SMAD5-AS1Q9Y6J3 95 aa10.7□□□□□ -0.7
SREBF1-202ENST00000355815 TNRC6BQ9UPQ9 1833 aaKnown RBP10.69□□□□□ -0.7
SREBF1-202ENST00000355815 FAM223BA6NKX1 122 aa10.69□□□□□ -0.7
SREBF1-202ENST00000355815 FAM223AQ8IWN6 122 aa10.69□□□□□ -0.7
SREBF1-202ENST00000355815 ODF3BA8MYP8 253 aa10.69□□□□□ -0.7
SREBF1-202ENST00000355815 J3KT08 172 aa10.69□□□□□ -0.7
SREBF1-202ENST00000355815 MRGPRG-AS1Q2M3A8 158 aa10.69□□□□□ -0.7
SREBF1-202ENST00000355815 C10orf99Q6UWK7 81 aa10.69□□□□□ -0.7
SREBF1-202ENST00000355815 USMG5Q96IX5 58 aa10.69□□□□□ -0.7
SREBF1-202ENST00000355815 RBMY1FQ15415 496 aaKnown RBP10.69□□□□□ -0.7
SREBF1-202ENST00000355815 Q6ZS46 218 aa10.69□□□□□ -0.7
SREBF1-202ENST00000355815 UFSP1Q6NVU6 142 aa10.68□□□□□ -0.7
SREBF1-202ENST00000355815 LGALS9O00182 355 aa10.68□□□□□ -0.7
SREBF1-202ENST00000355815 CRLF1O75462 422 aa10.68□□□□□ -0.7
SREBF1-202ENST00000355815 A0A096LPF7 62 aa10.67□□□□□ -0.7
SREBF1-202ENST00000355815 C5orf47Q569G3 176 aa10.67□□□□□ -0.7
SREBF1-202ENST00000355815 ATP6V0E2Q8NHE4 81 aa10.67□□□□□ -0.7
SREBF1-202ENST00000355815 DPH3Q96FX2 82 aa10.67□□□□□ -0.7
SREBF1-202ENST00000355815 IGLC6P0CF74 106 aa10.67□□□□□ -0.7
SREBF1-202ENST00000355815 RHOHQ15669 191 aa10.66□□□□□ -0.7
SREBF1-202ENST00000355815 C5orf38Q86SI9 138 aa10.66□□□□□ -0.7
SREBF1-202ENST00000355815 TMEM243Q9BU79 118 aa10.66□□□□□ -0.7
SREBF1-202ENST00000355815 DAD1P61803 113 aa10.66□□□□□ -0.7
SREBF1-202ENST00000355815 NDUFA4O00483 81 aa10.66□□□□□ -0.7
SREBF1-202ENST00000355815 TOMM6Q96B49 74 aa10.66□□□□□ -0.7
SREBF1-202ENST00000355815 FSTL3O95633 263 aa10.65□□□□□ -0.7
SREBF1-202ENST00000355815 TRAV25A0A0B4J276 109 aa10.65□□□□□ -0.7
SREBF1-202ENST00000355815 FLNBO75369 2602 aaKnown RBP10.64□□□□□ -0.71
SREBF1-202ENST00000355815 C11orf71Q6IPW1 123 aa10.64□□□□□ -0.71
SREBF1-202ENST00000355815 IGHV7-4-1A0A0J9YVY3 117 aa10.64□□□□□ -0.71
SREBF1-202ENST00000355815 MRPS12O15235 138 aaKnown RBP10.64□□□□□ -0.71
SREBF1-202ENST00000355815 hADV29S1A0JD25 119 aa10.64□□□□□ -0.71
SREBF1-202ENST00000355815 SDIM1Q6ZPB5 146 aa10.64□□□□□ -0.71
SREBF1-202ENST00000355815 RELNP78509 3460 aa10.64□□□□□ -0.71
SREBF1-202ENST00000355815 IGHV3-30-3P0DP02 117 aa10.64□□□□□ -0.71
SREBF1-202ENST00000355815 PKIGQ9Y2B9 76 aa10.64□□□□□ -0.71
SREBF1-202ENST00000355815 SPATA25Q9BR10 227 aa10.63□□□□□ -0.71
SREBF1-202ENST00000355815 A0A0B4J2C4 111 aa10.63□□□□□ -0.71
SREBF1-202ENST00000355815 A0A0J9YY99 117 aa10.63□□□□□ -0.71
SREBF1-202ENST00000355815 ATP5G1P05496 136 aa10.63□□□□□ -0.71
SREBF1-202ENST00000355815 CFAP126Q5VTH2 177 aa10.63□□□□□ -0.71
SREBF1-202ENST00000355815 LINC01356Q8N9X3 169 aa10.63□□□□□ -0.71
SREBF1-202ENST00000355815 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
SREBF1-202ENST00000355815 C10orf105Q8TEF2 133 aa10.63□□□□□ -0.71
SREBF1-202ENST00000355815 OVOL2Q9BRP0 275 aa10.63□□□□□ -0.71
SREBF1-202ENST00000355815 IGHV4-4A0A075B6R2 117 aa10.62□□□□□ -0.71
SREBF1-202ENST00000355815 LECT2O14960 151 aa10.62□□□□□ -0.71
SREBF1-202ENST00000355815 C14orf132Q9NPU4 83 aa10.62□□□□□ -0.71
SREBF1-202ENST00000355815 ATOX1O00244 68 aa10.62□□□□□ -0.71
SREBF1-202ENST00000355815 SRSF2Q01130 221 aaKnown RBP10.62□□□□□ -0.71
SREBF1-202ENST00000355815 A8MZ25 164 aa10.61□□□□□ -0.71
SREBF1-202ENST00000355815 C20orf173Q96LM9 149 aa10.61□□□□□ -0.71
SREBF1-202ENST00000355815 TRAV23DV6A0A075B6W5 121 aa10.61□□□□□ -0.71
SREBF1-202ENST00000355815 P0DMU3 169 aa10.61□□□□□ -0.71
SREBF1-202ENST00000355815 FAM231AP0DMU4 169 aa10.61□□□□□ -0.71
SREBF1-202ENST00000355815 FAM231CP0DMU5 169 aa10.61□□□□□ -0.71
SREBF1-202ENST00000355815 Q96MF0 132 aa10.61□□□□□ -0.71
SREBF1-202ENST00000355815 MDFICQ9P1T7 246 aa10.61□□□□□ -0.71
SREBF1-202ENST00000355815 RHODO00212 210 aa10.61□□□□□ -0.71
SREBF1-202ENST00000355815 EDN2P20800 178 aa10.61□□□□□ -0.71
SREBF1-202ENST00000355815 SND1-IT1Q9HBX3 110 aa10.61□□□□□ -0.71
SREBF1-202ENST00000355815 ASH1LQ9NR48 2969 aaKnown RBP10.61□□□□□ -0.71
SREBF1-202ENST00000355815 TRAV13-2A0A0B4J235 113 aa10.61□□□□□ -0.71
SREBF1-202ENST00000355815 F8W735 103 aaPredicted RBP10.6□□□□□ -0.71
SREBF1-202ENST00000355815 H3BT86 120 aa10.6□□□□□ -0.71
SREBF1-202ENST00000355815 TRIAP1O43715 76 aa10.6□□□□□ -0.71
SREBF1-202ENST00000355815 XCL1P47992 114 aa10.6□□□□□ -0.71
SREBF1-202ENST00000355815 NSUN5P1Q3KNT7 163 aa10.6□□□□□ -0.71
SREBF1-202ENST00000355815 ZFAND3Q9H8U3 227 aa10.6□□□□□ -0.71
SREBF1-202ENST00000355815 SLURP1P55000 103 aa10.6□□□□□ -0.71
SREBF1-202ENST00000355815 HERVK_113P63121 156 aa10.6□□□□□ -0.71
SREBF1-202ENST00000355815 C20orf197Q8N268 126 aa10.6□□□□□ -0.71
SREBF1-202ENST00000355815 MRPL53Q96EL3 112 aaKnown RBP10.6□□□□□ -0.71
SREBF1-202ENST00000355815 FAM110AQ9BQ89 295 aa10.6□□□□□ -0.71
SREBF1-202ENST00000355815 HECTD1Q9ULT8 2610 aa10.6□□□□□ -0.71
SREBF1-202ENST00000355815 A0A0U1RQV1 116 aa10.59□□□□□ -0.71
SREBF1-202ENST00000355815 ACYP1P07311 99 aa10.59□□□□□ -0.71
SREBF1-202ENST00000355815 APRG1Q8IVJ8 170 aa10.59□□□□□ -0.71
SREBF1-202ENST00000355815 RNF185Q96GF1 192 aa10.59□□□□□ -0.71
SREBF1-202ENST00000355815 PRM2P04554 102 aa10.59□□□□□ -0.71
SREBF1-202ENST00000355815 IGHV3-33P01772 117 aa10.58□□□□□ -0.72
SREBF1-202ENST00000355815 SLC25A29Q8N8R3 303 aa10.58□□□□□ -0.72
SREBF1-202ENST00000355815 A0A0J9YXY3 114 aa10.58□□□□□ -0.72
SREBF1-202ENST00000355815 PRR9Q5T870 116 aa10.58□□□□□ -0.72
SREBF1-202ENST00000355815 PPDPFQ9H3Y8 114 aa10.58□□□□□ -0.72
SREBF1-202ENST00000355815 NEXN-AS1Q8NBZ9 246 aa10.58□□□□□ -0.72
SREBF1-202ENST00000355815 BRK1Q8WUW1 75 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms