RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 UPK3BQ9BT76 320 aa5.78□□□□□ -1.48
CD46-203ENST00000354848 APC2O95996 2303 aa5.78□□□□□ -1.48
CD46-203ENST00000354848 KLRB1Q12918 225 aa5.77□□□□□ -1.49
CD46-203ENST00000354848 Q5XG85 94 aa5.77□□□□□ -1.49
CD46-203ENST00000354848 HRCT1Q6UXD1 115 aa5.77□□□□□ -1.49
CD46-203ENST00000354848 UNQ9165/PRO28630Q6UXU0 137 aa5.77□□□□□ -1.49
CD46-203ENST00000354848 Q8N2B8 174 aa5.77□□□□□ -1.49
CD46-203ENST00000354848 PYGO1Q9Y3Y4 419 aa5.77□□□□□ -1.49
CD46-203ENST00000354848 TTC28Q96AY4 2481 aa5.77□□□□□ -1.49
CD46-203ENST00000354848 IGKV3-7A0A075B6H7 116 aa5.77□□□□□ -1.49
CD46-203ENST00000354848 MINOS1Q5TGZ0 78 aa5.77□□□□□ -1.49
CD46-203ENST00000354848 TINCRA0A1B0GVN0 87 aa5.76□□□□□ -1.49
CD46-203ENST00000354848 RS1O15537 224 aa5.76□□□□□ -1.49
CD46-203ENST00000354848 INAFM2P0DMQ5 153 aa5.76□□□□□ -1.49
CD46-203ENST00000354848 SERP2Q8N6R1 65 aa5.76□□□□□ -1.49
CD46-203ENST00000354848 C9orf85Q96MD7 179 aa5.76□□□□□ -1.49
CD46-203ENST00000354848 ATMQ13315 3056 aa5.76□□□□□ -1.49
CD46-203ENST00000354848 LY6HO94772 140 aa5.76□□□□□ -1.49
CD46-203ENST00000354848 FAM222AQ5U5X8 452 aa5.76□□□□□ -1.49
CD46-203ENST00000354848 LINC00308Q8TCZ7 52 aa5.76□□□□□ -1.49
CD46-203ENST00000354848 FAM218AQ96MZ4 157 aa5.76□□□□□ -1.49
CD46-203ENST00000354848 IGHV3-16A0A0C4DH30 117 aa5.75□□□□□ -1.49
CD46-203ENST00000354848 RNF152Q8N8N0 203 aa5.75□□□□□ -1.49
CD46-203ENST00000354848 IGKV3D-7A0A0C4DH55 119 aa5.74□□□□□ -1.49
CD46-203ENST00000354848 NDUFA1O15239 70 aa5.74□□□□□ -1.49
CD46-203ENST00000354848 TRBV12-3P01733 135 aa5.74□□□□□ -1.49
CD46-203ENST00000354848 MINOS1-NBL1R4GNA1 71 aa5.74□□□□□ -1.49
CD46-203ENST00000354848 BSNQ9UPA5 3926 aa5.74□□□□□ -1.49
CD46-203ENST00000354848 A0A087WVE0 104 aa5.74□□□□□ -1.49
CD46-203ENST00000354848 CIRBPQ14011 172 aaKnown RBP5.74□□□□□ -1.49
CD46-203ENST00000354848 A0A0U1RRA0 63 aa5.74□□□□□ -1.49
CD46-203ENST00000354848 SOSTDC1Q6X4U4 206 aa5.74□□□□□ -1.49
CD46-203ENST00000354848 PRO3102Q9H379 93 aa5.74□□□□□ -1.49
CD46-203ENST00000354848 Q9HAA7 133 aa5.74□□□□□ -1.49
CD46-203ENST00000354848 IGHG2P01859 326 aa5.73□□□□□ -1.49
CD46-203ENST00000354848 MALP21145 153 aa5.73□□□□□ -1.49
CD46-203ENST00000354848 IGFL3Q6UXB1 125 aa5.73□□□□□ -1.49
CD46-203ENST00000354848 PRIMA1Q86XR5 153 aa5.73□□□□□ -1.49
CD46-203ENST00000354848 CDKN2A-AS1Q9UH64 79 aa5.73□□□□□ -1.49
CD46-203ENST00000354848 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.73□□□□□ -1.49
CD46-203ENST00000354848 NDUFA4O00483 81 aa5.73□□□□□ -1.49
CD46-203ENST00000354848 LINC01561Q8N1V8 128 aa5.73□□□□□ -1.49
CD46-203ENST00000354848 ZNF625Q96I27 306 aaPredicted RBP5.73□□□□□ -1.49
CD46-203ENST00000354848 DNAL4O96015 105 aa5.72□□□□□ -1.49
CD46-203ENST00000354848 Q6JHZ5 121 aa5.72□□□□□ -1.49
CD46-203ENST00000354848 MRAPQ8TCY5 172 aa5.72□□□□□ -1.49
CD46-203ENST00000354848 USP17L23D6RBM5 183 aa5.72□□□□□ -1.49
CD46-203ENST00000354848 Q9H8V8 135 aa5.72□□□□□ -1.49
CD46-203ENST00000354848 ASH1LQ9NR48 2969 aaKnown RBP5.72□□□□□ -1.49
CD46-203ENST00000354848 TRAV12-2A0A075B6T6 113 aa5.72□□□□□ -1.49
CD46-203ENST00000354848 SYNJ2BPP57105 145 aa5.72□□□□□ -1.49
CD46-203ENST00000354848 C9orf129Q5T035 196 aaKnown RBP5.72□□□□□ -1.49
CD46-203ENST00000354848 LINC00846Q9NV44 126 aa5.72□□□□□ -1.49
CD46-203ENST00000354848 UBE2D4Q9Y2X8 147 aa5.72□□□□□ -1.49
CD46-203ENST00000354848 FAM223BA6NKX1 122 aa5.71□□□□□ -1.49
CD46-203ENST00000354848 HOXD3P31249 432 aaPredicted RBP5.71□□□□□ -1.49
CD46-203ENST00000354848 FAM223AQ8IWN6 122 aa5.71□□□□□ -1.49
CD46-203ENST00000354848 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.71□□□□□ -1.49
CD46-203ENST00000354848 FHL2Q14192 279 aa5.71□□□□□ -1.5
CD46-203ENST00000354848 C10orf105Q8TEF2 133 aa5.71□□□□□ -1.5
CD46-203ENST00000354848 RHPN1-AS1Q9BWJ2 59 aa5.71□□□□□ -1.5
CD46-203ENST00000354848 C14orf132Q9NPU4 83 aa5.71□□□□□ -1.5
CD46-203ENST00000354848 PTPRQQ9UMZ3 2332 aa5.71□□□□□ -1.5
CD46-203ENST00000354848 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.7□□□□□ -1.5
CD46-203ENST00000354848 IGHV3-73A0A0B4J1V6 119 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 IGKV2-29A2NJV5 120 aaPredicted RBP5.7□□□□□ -1.5
CD46-203ENST00000354848 PROK1P58294 105 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 PLA2G2CQ5R387 149 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 CHCHD7Q9BUK0 85 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 K7ENP7 123 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 ZNF415Q09FC8 603 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 C5orf56Q8N8D9 126 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 IGLV5-45A0A087WSX0 123 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 IGKV3-20P01619 116 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 ZFP36P26651 326 aaKnown RBP5.7□□□□□ -1.5
CD46-203ENST00000354848 HIST2H2BCQ6DN03 193 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 HIST2H2BDQ6DRA6 164 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 COPS9Q8WXC6 57 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 Q9UF83 564 aa5.7□□□□□ -1.5
CD46-203ENST00000354848 SPTBN1Q01082 2364 aaKnown RBP5.7□□□□□ -1.5
CD46-203ENST00000354848 IGHV1OR15-1A0A075B7D0 117 aa5.69□□□□□ -1.5
CD46-203ENST00000354848 COX6A2Q02221 97 aa5.69□□□□□ -1.5
CD46-203ENST00000354848 SIRPDQ9H106 197 aa5.69□□□□□ -1.5
CD46-203ENST00000354848 IGHV3-11P01762 117 aa5.69□□□□□ -1.5
CD46-203ENST00000354848 EDN2P20800 178 aa5.69□□□□□ -1.5
CD46-203ENST00000354848 UCNP55089 124 aa5.69□□□□□ -1.5
CD46-203ENST00000354848 C19orf54Q5BKX5 351 aa5.69□□□□□ -1.5
CD46-203ENST00000354848 DOPEY2Q9Y3R5 2298 aa5.69□□□□□ -1.5
CD46-203ENST00000354848 IGLV5-39A0A0G2JS06 123 aa5.69□□□□□ -1.5
CD46-203ENST00000354848 SAA4P35542 130 aa5.69□□□□□ -1.5
CD46-203ENST00000354848 LINC00467Q9BRT7 94 aa5.69□□□□□ -1.5
CD46-203ENST00000354848 RPL28P46779 137 aaKnown RBP5.68□□□□□ -1.5
CD46-203ENST00000354848 LINC01560Q8TB33 94 aa5.68□□□□□ -1.5
CD46-203ENST00000354848 PIK3CD-AS1Q5SR53 167 aa5.68□□□□□ -1.5
CD46-203ENST00000354848 OBSCN-AS1Q96MR7 158 aa5.68□□□□□ -1.5
CD46-203ENST00000354848 ANKHD1Q8IWZ3 2542 aaKnown RBP5.67□□□□□ -1.5
CD46-203ENST00000354848 A0A087WYN8 130 aa5.67□□□□□ -1.5
CD46-203ENST00000354848 SPINK13Q1W4C9 94 aa5.67□□□□□ -1.5
CD46-203ENST00000354848 AKAP13Q12802 2813 aa5.67□□□□□ -1.5
CD46-203ENST00000354848 BDP1A6H8Y1 2624 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms