RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 CSRP1P21291 193 aaKnown RBP6.23□□□□□ -1.41
SCN8A-201ENST00000354534 Q8TCH9 128 aa6.23□□□□□ -1.41
SCN8A-201ENST00000354534 XAGE1AQ9HD64 81 aa6.23□□□□□ -1.41
SCN8A-201ENST00000354534 TMEM223A0PJW6 202 aa6.23□□□□□ -1.41
SCN8A-201ENST00000354534 UBE2D3P61077 147 aa6.23□□□□□ -1.41
SCN8A-201ENST00000354534 SPINT4Q6UDR6 99 aa6.23□□□□□ -1.41
SCN8A-201ENST00000354534 ADAMTS9Q9P2N4 1935 aa6.23□□□□□ -1.41
SCN8A-201ENST00000354534 UBE2D1P51668 147 aa6.23□□□□□ -1.41
SCN8A-201ENST00000354534 COX7CP15954 63 aa6.22□□□□□ -1.41
SCN8A-201ENST00000354534 CLUHP3Q96NS8 147 aa6.22□□□□□ -1.41
SCN8A-201ENST00000354534 DEFB4AO15263 64 aa6.22□□□□□ -1.41
SCN8A-201ENST00000354534 LOXP28300 417 aaPredicted RBP6.22□□□□□ -1.41
SCN8A-201ENST00000354534 C9orf66Q5T8R8 295 aa6.22□□□□□ -1.41
SCN8A-201ENST00000354534 WDR90Q96KV7 1748 aa6.22□□□□□ -1.41
SCN8A-201ENST00000354534 LENEPQ9Y5L5 61 aa6.22□□□□□ -1.41
SCN8A-201ENST00000354534 DNAJC9-AS1A6NH13 148 aa6.22□□□□□ -1.41
SCN8A-201ENST00000354534 NUPR1O60356 82 aa6.22□□□□□ -1.41
SCN8A-201ENST00000354534 SPATA12Q7Z6I5 190 aa6.22□□□□□ -1.41
SCN8A-201ENST00000354534 SMIM9A6NGZ8 99 aa6.21□□□□□ -1.41
SCN8A-201ENST00000354534 E7EQL1 145 aa6.21□□□□□ -1.41
SCN8A-201ENST00000354534 MIFP14174 115 aa6.21□□□□□ -1.41
SCN8A-201ENST00000354534 KLK5Q9Y337 293 aaPredicted RBP6.21□□□□□ -1.42
SCN8A-201ENST00000354534 H3BUA1 57 aa6.21□□□□□ -1.42
SCN8A-201ENST00000354534 SLURP1P55000 103 aa6.21□□□□□ -1.42
SCN8A-201ENST00000354534 MED14OSP0DP75 135 aa6.2□□□□□ -1.42
SCN8A-201ENST00000354534 FHL1Q13642 323 aa6.2□□□□□ -1.42
SCN8A-201ENST00000354534 FLVCR1-AS1Q8TAF5 88 aa6.2□□□□□ -1.42
SCN8A-201ENST00000354534 KIF26AQ9ULI4 1882 aaPredicted RBP6.2□□□□□ -1.42
SCN8A-201ENST00000354534 GP9P14770 177 aa6.2□□□□□ -1.42
SCN8A-201ENST00000354534 ODF1Q14990 250 aa6.2□□□□□ -1.42
SCN8A-201ENST00000354534 BEAN1Q3B7T3 259 aa6.2□□□□□ -1.42
SCN8A-201ENST00000354534 WT1-ASQ06250 92 aa6.2□□□□□ -1.42
SCN8A-201ENST00000354534 SPAG11AQ6PDA7 123 aa6.2□□□□□ -1.42
SCN8A-201ENST00000354534 KIAA1549LQ6ZVL6 1849 aa6.2□□□□□ -1.42
SCN8A-201ENST00000354534 LMO1P25800 156 aa6.2□□□□□ -1.42
SCN8A-201ENST00000354534 DCANP1Q8TF63 244 aa6.2□□□□□ -1.42
SCN8A-201ENST00000354534 NUP210LQ5VU65 1888 aa6.2□□□□□ -1.42
SCN8A-201ENST00000354534 ZNF106Q9H2Y7 1883 aaKnown RBP6.2□□□□□ -1.42
SCN8A-201ENST00000354534 ALPK3Q96L96 1907 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 MSRB1Q9NZV6 116 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 MRPS36P82909 103 aaKnown RBP6.19□□□□□ -1.42
SCN8A-201ENST00000354534 IMUPQ9GZP8 106 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 NAV2Q8IVL1 2488 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 C14orf177Q52M58 125 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 C2orf70A6NJV1 201 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 J3QLI3 93 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 SPINK1P00995 79 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 FAM19A5Q7Z5A7 132 aaPredicted RBP6.19□□□□□ -1.42
SCN8A-201ENST00000354534 TMEM105Q8N8V8 129 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 C17orf58Q2M2W7 97 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 OXLD1Q5BKU9 147 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 LINC00311Q8N616 119 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 CEP192Q8TEP8 1941 aa6.19□□□□□ -1.42
SCN8A-201ENST00000354534 LINC00269Q8N2A0 174 aa6.18□□□□□ -1.42
SCN8A-201ENST00000354534 PPDPFQ9H3Y8 114 aa6.18□□□□□ -1.42
SCN8A-201ENST00000354534 IGLV9-49A0A0B4J1Y8 123 aa6.18□□□□□ -1.42
SCN8A-201ENST00000354534 P0DMU3 169 aa6.18□□□□□ -1.42
SCN8A-201ENST00000354534 FAM231AP0DMU4 169 aa6.18□□□□□ -1.42
SCN8A-201ENST00000354534 FAM231CP0DMU5 169 aa6.18□□□□□ -1.42
SCN8A-201ENST00000354534 UFSP1Q6NVU6 142 aa6.18□□□□□ -1.42
SCN8A-201ENST00000354534 CELA1Q9UNI1 258 aa6.18□□□□□ -1.42
SCN8A-201ENST00000354534 PIEZO1Q92508 2521 aa6.18□□□□□ -1.42
SCN8A-201ENST00000354534 FOXL2NBQ6ZUU3 175 aa6.18□□□□□ -1.42
SCN8A-201ENST00000354534 A0A0J9YXY3 114 aa6.18□□□□□ -1.42
SCN8A-201ENST00000354534 RETNLBQ9BQ08 111 aa6.18□□□□□ -1.42
SCN8A-201ENST00000354534 CRYGAP11844 174 aa6.17□□□□□ -1.42
SCN8A-201ENST00000354534 LTBP1Q14766 1721 aa6.17□□□□□ -1.42
SCN8A-201ENST00000354534 WDR87Q6ZQQ6 2873 aa6.17□□□□□ -1.42
SCN8A-201ENST00000354534 UBE2D2P62837 147 aa6.17□□□□□ -1.42
SCN8A-201ENST00000354534 CEMP1Q6PRD7 247 aaPredicted RBP6.17□□□□□ -1.42
SCN8A-201ENST00000354534 Q6ZQY7 126 aa6.17□□□□□ -1.42
SCN8A-201ENST00000354534 A8MZ25 164 aa6.17□□□□□ -1.42
SCN8A-201ENST00000354534 ESRGQ1W209 222 aa6.17□□□□□ -1.42
SCN8A-201ENST00000354534 MRPS12O15235 138 aaKnown RBP6.17□□□□□ -1.42
SCN8A-201ENST00000354534 DIAPH2-AS1Q14236 149 aa6.17□□□□□ -1.42
SCN8A-201ENST00000354534 LINC00208Q96KT6 92 aa6.17□□□□□ -1.42
SCN8A-201ENST00000354534 CD59P13987 128 aa6.16□□□□□ -1.42
SCN8A-201ENST00000354534 IGKV2-28A0A075B6P5 120 aa6.16□□□□□ -1.42
SCN8A-201ENST00000354534 TRIAP1O43715 76 aa6.16□□□□□ -1.42
SCN8A-201ENST00000354534 IGKV2D-28P01615 120 aa6.16□□□□□ -1.42
SCN8A-201ENST00000354534 CFAP126Q5VTH2 177 aa6.16□□□□□ -1.42
SCN8A-201ENST00000354534 Q6ZR03 302 aa6.16□□□□□ -1.42
SCN8A-201ENST00000354534 KIAA1671Q9BY89 1806 aa6.16□□□□□ -1.42
SCN8A-201ENST00000354534 DEFB135Q30KP9 77 aa6.16□□□□□ -1.42
SCN8A-201ENST00000354534 MDFICQ9P1T7 246 aa6.16□□□□□ -1.42
SCN8A-201ENST00000354534 Q8N976 141 aa6.16□□□□□ -1.42
SCN8A-201ENST00000354534 C7orf33Q8WU49 177 aa6.16□□□□□ -1.42
SCN8A-201ENST00000354534 PIEZO2Q9H5I5 2752 aa6.15□□□□□ -1.42
SCN8A-201ENST00000354534 CRIPAKQ8N1N5 446 aa6.15□□□□□ -1.42
SCN8A-201ENST00000354534 PCNX3Q9H6A9 2034 aa6.15□□□□□ -1.42
SCN8A-201ENST00000354534 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.15□□□□□ -1.42
SCN8A-201ENST00000354534 A6NDX4 124 aa6.15□□□□□ -1.43
SCN8A-201ENST00000354534 RNASE3P12724 160 aaKnown RBP6.14□□□□□ -1.43
SCN8A-201ENST00000354534 TRBV6-1A0A0K0K1D8 114 aa6.14□□□□□ -1.43
SCN8A-201ENST00000354534 ZFAND2AQ8N6M9 145 aa6.14□□□□□ -1.43
SCN8A-201ENST00000354534 TRAV7A0A075B6U4 112 aa6.14□□□□□ -1.43
SCN8A-201ENST00000354534 REG3AQ06141 175 aa6.14□□□□□ -1.43
SCN8A-201ENST00000354534 C5orf56Q8N8D9 126 aa6.14□□□□□ -1.43
SCN8A-201ENST00000354534 VPREB3Q9UKI3 123 aa6.14□□□□□ -1.43
SCN8A-201ENST00000354534 B3GALT5-AS1P59052 145 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms