RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 C1QTNF4Q9BXJ3 329 aa6.33□□□□□ -1.4
TRIM55-204ENST00000353317 SDHAF1A6NFY7 115 aa6.33□□□□□ -1.4
TRIM55-204ENST00000353317 F5H697 171 aa6.33□□□□□ -1.4
TRIM55-204ENST00000353317 LGALS9O00182 355 aa6.33□□□□□ -1.4
TRIM55-204ENST00000353317 KIR2DL4Q99706 377 aa6.33□□□□□ -1.4
TRIM55-204ENST00000353317 TRAV12-3A0A0B4J271 114 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 VCYO14598 125 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 IGHV3-30P01768 117 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 IGHV3-30-5P0DP03 117 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 PAPPA-AS1Q5QFB9 102 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 TMEM170BQ5T4T1 132 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 PTH2Q96A98 100 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 TIMM17AQ99595 171 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 STAB1Q9NY15 2570 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 TRBV27A0A0K0K1C4 114 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 NDUFA7O95182 113 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 CFC1BP0CG36 223 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 CFC1P0CG37 223 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 HERVK_113P61574 105 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 ZNF876PQ49A33 203 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 FAM74A4Q5TZK3 123 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 SPATA3Q8NHX4 192 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 TMEM141Q96I45 108 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 AMELXQ99217 191 aa6.32□□□□□ -1.4
TRIM55-204ENST00000353317 FHL3Q13643 280 aa6.31□□□□□ -1.4
TRIM55-204ENST00000353317 SLC25A29Q8N8R3 303 aa6.31□□□□□ -1.4
TRIM55-204ENST00000353317 SYT8Q8NBV8 401 aa6.31□□□□□ -1.4
TRIM55-204ENST00000353317 TCL1BO95988 128 aa6.31□□□□□ -1.4
TRIM55-204ENST00000353317 ATP6V0E2Q8NHE4 81 aa6.31□□□□□ -1.4
TRIM55-204ENST00000353317 OPRPNQ99935 248 aaPredicted RBP6.31□□□□□ -1.4
TRIM55-204ENST00000353317 CDIP1Q9H305 208 aa6.31□□□□□ -1.4
TRIM55-204ENST00000353317 ZNF256Q9Y2P7 627 aaPredicted RBP6.31□□□□□ -1.4
TRIM55-204ENST00000353317 CCL24O00175 119 aa6.3□□□□□ -1.4
TRIM55-204ENST00000353317 MDFICQ9P1T7 246 aa6.3□□□□□ -1.4
TRIM55-204ENST00000353317 TRAV12-2A0A075B6T6 113 aa6.3□□□□□ -1.4
TRIM55-204ENST00000353317 J3QQQ9 107 aa6.3□□□□□ -1.4
TRIM55-204ENST00000353317 C10orf126Q8N4M7 172 aa6.3□□□□□ -1.4
TRIM55-204ENST00000353317 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.3□□□□□ -1.4
TRIM55-204ENST00000353317 IGHV3-16A0A0C4DH30 117 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 TRBV6-5A0A0K0K1A5 114 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 M0QY20 66 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 NSUN5P1Q3KNT7 163 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 CARD19Q96LW7 228 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 A0A1B0GV72 72 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 K7EQG2 157 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 IGKV3-20P01619 116 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 ZNF688P0C7X2 276 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 P0DMU3 169 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 FAM231AP0DMU4 169 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 FAM231CP0DMU5 169 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 TMEM61Q8N0U2 210 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 Q8N1Y9 231 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 C9orf85Q96MD7 179 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 PKD1L1Q8TDX9 2849 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 ID1P41134 155 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 ZNF56Q15929 161 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 TEN1Q86WV5 123 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 PRO1854Q9UHT4 67 aa6.29□□□□□ -1.4
TRIM55-204ENST00000353317 TRBV20-1A0A075B6N2 111 aa6.28□□□□□ -1.4
TRIM55-204ENST00000353317 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
TRIM55-204ENST00000353317 LYRM7Q5U5X0 104 aa6.28□□□□□ -1.4
TRIM55-204ENST00000353317 IGHV3-64A0A075B6Q5 118 aa6.28□□□□□ -1.4
TRIM55-204ENST00000353317 LGALS3P17931 250 aaKnown RBP6.28□□□□□ -1.4
TRIM55-204ENST00000353317 DEFB114Q30KQ6 69 aa6.28□□□□□ -1.4
TRIM55-204ENST00000353317 SBSPONQ8IVN8 264 aa6.28□□□□□ -1.4
TRIM55-204ENST00000353317 COL6A5A8TX70 2615 aa6.27□□□□□ -1.41
TRIM55-204ENST00000353317 TMEM223A0PJW6 202 aa6.27□□□□□ -1.41
TRIM55-204ENST00000353317 A4D1N5 150 aa6.27□□□□□ -1.41
TRIM55-204ENST00000353317 MT-ATP8P03928 68 aa6.27□□□□□ -1.41
TRIM55-204ENST00000353317 SCGB1C2P0DMR2 95 aa6.27□□□□□ -1.41
TRIM55-204ENST00000353317 XGP55808 180 aa6.27□□□□□ -1.41
TRIM55-204ENST00000353317 CKS1BP61024 79 aa6.27□□□□□ -1.41
TRIM55-204ENST00000353317 PPDPFLQ8WWR9 84 aa6.27□□□□□ -1.41
TRIM55-204ENST00000353317 A0A0J9YX75 114 aa6.27□□□□□ -1.41
TRIM55-204ENST00000353317 SPINK8P0C7L1 97 aa6.27□□□□□ -1.41
TRIM55-204ENST00000353317 SPINK13Q1W4C9 94 aa6.27□□□□□ -1.41
TRIM55-204ENST00000353317 A8MWV9 139 aa6.26□□□□□ -1.41
TRIM55-204ENST00000353317 LEPROTO15243 131 aa6.26□□□□□ -1.41
TRIM55-204ENST00000353317 RHOHQ15669 191 aa6.26□□□□□ -1.41
TRIM55-204ENST00000353317 Q6ZUT4 128 aa6.26□□□□□ -1.41
TRIM55-204ENST00000353317 C20orf203Q8NBC4 194 aa6.26□□□□□ -1.41
TRIM55-204ENST00000353317 TRAV2A0A0B4J234 112 aa6.26□□□□□ -1.41
TRIM55-204ENST00000353317 A0A0J9YXV3 536 aa6.26□□□□□ -1.41
TRIM55-204ENST00000353317 RHODO00212 210 aa6.26□□□□□ -1.41
TRIM55-204ENST00000353317 ZNF22P17026 224 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-204ENST00000353317 CRYBA4P53673 196 aa6.26□□□□□ -1.41
TRIM55-204ENST00000353317 TRPT1Q86TN4 253 aaKnown RBP6.26□□□□□ -1.41
TRIM55-204ENST00000353317 ANKRD29Q8N6D5 301 aa6.26□□□□□ -1.41
TRIM55-204ENST00000353317 ODF3Q96PU9 254 aa6.26□□□□□ -1.41
TRIM55-204ENST00000353317 IGHV1OR15-1A0A075B7D0 117 aa6.25□□□□□ -1.41
TRIM55-204ENST00000353317 IGHV3-33P01772 117 aa6.25□□□□□ -1.41
TRIM55-204ENST00000353317 MUSTN1Q8IVN3 82 aa6.25□□□□□ -1.41
TRIM55-204ENST00000353317 TMEM263Q8WUH6 116 aaKnown RBP6.25□□□□□ -1.41
TRIM55-204ENST00000353317 PEMTQ9UBM1 199 aa6.25□□□□□ -1.41
TRIM55-204ENST00000353317 CMYA5Q8N3K9 4069 aa6.25□□□□□ -1.41
TRIM55-204ENST00000353317 IGLV4-3A0A075B6K6 122 aa6.25□□□□□ -1.41
TRIM55-204ENST00000353317 H7C2G1 150 aa6.25□□□□□ -1.41
TRIM55-204ENST00000353317 I3L3M4 83 aa6.25□□□□□ -1.41
TRIM55-204ENST00000353317 SNRPD3P62318 126 aaKnown RBP6.25□□□□□ -1.41
TRIM55-204ENST00000353317 PRIMA1Q86XR5 153 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms