RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 RNF223E7ERA6 249 aa13.43□□□□□ -0.26
CTSB-202ENST00000353047 H3BMM0 161 aa13.43□□□□□ -0.26
CTSB-202ENST00000353047 IGHV3-30P01768 117 aa13.43□□□□□ -0.26
CTSB-202ENST00000353047 IGHV3-30-5P0DP03 117 aa13.43□□□□□ -0.26
CTSB-202ENST00000353047 PRIMA1Q86XR5 153 aa13.43□□□□□ -0.26
CTSB-202ENST00000353047 SLC25A29Q8N8R3 303 aa13.43□□□□□ -0.26
CTSB-202ENST00000353047 UBE2WQ96B02 151 aa13.43□□□□□ -0.26
CTSB-202ENST00000353047 IGHV4OR15-8A0A075B7B6 117 aa13.43□□□□□ -0.26
CTSB-202ENST00000353047 A0A087WW49 117 aa13.43□□□□□ -0.26
CTSB-202ENST00000353047 AVPP01185 164 aa13.43□□□□□ -0.26
CTSB-202ENST00000353047 LINC01620Q4KN68 170 aa13.43□□□□□ -0.26
CTSB-202ENST00000353047 GAGE12JA6NER3 117 aa13.42□□□□□ -0.26
CTSB-202ENST00000353047 ZNF22P17026 224 aaPredicted RBP13.42□□□□□ -0.26
CTSB-202ENST00000353047 GAGE4Q13068 117 aa13.42□□□□□ -0.26
CTSB-202ENST00000353047 GAGE5Q13069 117 aa13.42□□□□□ -0.26
CTSB-202ENST00000353047 PSMG3-AS1Q96PY0 264 aa13.42□□□□□ -0.26
CTSB-202ENST00000353047 NBEAL2Q6ZNJ1 2754 aa13.42□□□□□ -0.26
CTSB-202ENST00000353047 COX8CQ7Z4L0 72 aa13.42□□□□□ -0.26
CTSB-202ENST00000353047 TRGV11A0A075B6L2 103 aa13.42□□□□□ -0.26
CTSB-202ENST00000353047 UBE2L6O14933 153 aa13.42□□□□□ -0.26
CTSB-202ENST00000353047 C20orf203Q8NBC4 194 aa13.42□□□□□ -0.26
CTSB-202ENST00000353047 TRGV2A0A075B6R0 118 aa13.41□□□□□ -0.26
CTSB-202ENST00000353047 IGIPA6NJ69 53 aa13.41□□□□□ -0.26
CTSB-202ENST00000353047 FBXL19-AS1Q494R0 122 aa13.41□□□□□ -0.26
CTSB-202ENST00000353047 C18orf65Q6ZTR6 163 aa13.41□□□□□ -0.26
CTSB-202ENST00000353047 PIFOQ8TCI5 191 aa13.41□□□□□ -0.26
CTSB-202ENST00000353047 TRAV4A0A0B4J268 109 aa13.4□□□□□ -0.26
CTSB-202ENST00000353047 IGHG2P01859 326 aa13.4□□□□□ -0.26
CTSB-202ENST00000353047 POLR2KP53803 58 aaKnown RBP13.4□□□□□ -0.26
CTSB-202ENST00000353047 M0QY20 66 aa13.4□□□□□ -0.26
CTSB-202ENST00000353047 SPATA25Q9BR10 227 aa13.4□□□□□ -0.26
CTSB-202ENST00000353047 Q9H8V8 135 aa13.4□□□□□ -0.26
CTSB-202ENST00000353047 A0A0J9YXY3 114 aa13.4□□□□□ -0.26
CTSB-202ENST00000353047 ELANEP08246 267 aa13.4□□□□□ -0.26
CTSB-202ENST00000353047 B4DSR2 109 aa13.39□□□□□ -0.27
CTSB-202ENST00000353047 LEPROTO15243 131 aa13.39□□□□□ -0.27
CTSB-202ENST00000353047 TRIAP1O43715 76 aa13.39□□□□□ -0.27
CTSB-202ENST00000353047 NDUFA7O95182 113 aa13.39□□□□□ -0.27
CTSB-202ENST00000353047 RPL35AP18077 110 aaKnown RBP13.39□□□□□ -0.27
CTSB-202ENST00000353047 IGHV3-33P01772 117 aa13.39□□□□□ -0.27
CTSB-202ENST00000353047 PRO0461Q9UI25 63 aa13.39□□□□□ -0.27
CTSB-202ENST00000353047 IGLV4-3A0A075B6K6 122 aa13.39□□□□□ -0.27
CTSB-202ENST00000353047 A0A0J9YX75 114 aa13.39□□□□□ -0.27
CTSB-202ENST00000353047 TIMM17AQ99595 171 aa13.39□□□□□ -0.27
CTSB-202ENST00000353047 U3KQE9 123 aa13.39□□□□□ -0.27
CTSB-202ENST00000353047 UBE2D1P51668 147 aa13.38□□□□□ -0.27
CTSB-202ENST00000353047 CDIP1Q9H305 208 aa13.38□□□□□ -0.27
CTSB-202ENST00000353047 FBN2P35556 2912 aa13.37□□□□□ -0.27
CTSB-202ENST00000353047 IGHV4-4A0A075B6R2 117 aa13.37□□□□□ -0.27
CTSB-202ENST00000353047 PFN2P35080 140 aa13.37□□□□□ -0.27
CTSB-202ENST00000353047 TRBV7-9A0A0J9YWB2 115 aa13.37□□□□□ -0.27
CTSB-202ENST00000353047 FHL3Q13643 280 aa13.37□□□□□ -0.27
CTSB-202ENST00000353047 CDKN2A-AS1Q9UH64 79 aa13.37□□□□□ -0.27
CTSB-202ENST00000353047 NBL1P41271 181 aa13.36□□□□□ -0.27
CTSB-202ENST00000353047 NF1P21359 2839 aa13.36□□□□□ -0.27
CTSB-202ENST00000353047 STHQ8IWL8 128 aa13.36□□□□□ -0.27
CTSB-202ENST00000353047 ICOSQ9Y6W8 199 aa13.36□□□□□ -0.27
CTSB-202ENST00000353047 LINC00158P58513 81 aa13.36□□□□□ -0.27
CTSB-202ENST00000353047 CRLF1O75462 422 aa13.35□□□□□ -0.27
CTSB-202ENST00000353047 SMIM20Q8N5G0 67 aa13.35□□□□□ -0.27
CTSB-202ENST00000353047 TEX15Q9BXT5 2789 aa13.35□□□□□ -0.27
CTSB-202ENST00000353047 GAGE2AQ6NT46 116 aa13.34□□□□□ -0.27
CTSB-202ENST00000353047 TMEM61Q8N0U2 210 aa13.34□□□□□ -0.27
CTSB-202ENST00000353047 A0A096LPF7 62 aa13.34□□□□□ -0.27
CTSB-202ENST00000353047 TMEM223A0PJW6 202 aa13.34□□□□□ -0.27
CTSB-202ENST00000353047 DNAL4O96015 105 aa13.34□□□□□ -0.27
CTSB-202ENST00000353047 PRB1P04280 392 aa13.34□□□□□ -0.27
CTSB-202ENST00000353047 SCGB1A1P11684 91 aa13.34□□□□□ -0.27
CTSB-202ENST00000353047 IFITM1P13164 125 aa13.34□□□□□ -0.27
CTSB-202ENST00000353047 ADAMTSL4-AS1Q5T5F5 129 aa13.34□□□□□ -0.27
CTSB-202ENST00000353047 CLPSL2Q6UWE3 100 aa13.34□□□□□ -0.27
CTSB-202ENST00000353047 LINC00467Q9BRT7 94 aa13.34□□□□□ -0.27
CTSB-202ENST00000353047 DCANP1Q8TF63 244 aa13.33□□□□□ -0.28
CTSB-202ENST00000353047 ZNF415Q09FC8 603 aa13.33□□□□□ -0.28
CTSB-202ENST00000353047 COX6B1P14854 86 aa13.32□□□□□ -0.28
CTSB-202ENST00000353047 TRBV27A0A0K0K1C4 114 aa13.32□□□□□ -0.28
CTSB-202ENST00000353047 A6NDX4 124 aa13.32□□□□□ -0.28
CTSB-202ENST00000353047 CHCHD5Q9BSY4 110 aa13.32□□□□□ -0.28
CTSB-202ENST00000353047 Q9HAA7 133 aa13.32□□□□□ -0.28
CTSB-202ENST00000353047 FASNP49327 2511 aaKnown RBP13.31□□□□□ -0.28
CTSB-202ENST00000353047 GCN1Q92616 2671 aaKnown RBP13.31□□□□□ -0.28
CTSB-202ENST00000353047 KLLNB2CW77 178 aa13.31□□□□□ -0.28
CTSB-202ENST00000353047 C10orf105Q8TEF2 133 aa13.31□□□□□ -0.28
CTSB-202ENST00000353047 CFAP46Q8IYW2 2715 aa13.31□□□□□ -0.28
CTSB-202ENST00000353047 SOCS3O14543 225 aa13.31□□□□□ -0.28
CTSB-202ENST00000353047 GAGE7O76087 117 aa13.31□□□□□ -0.28
CTSB-202ENST00000353047 GAGE12FP0CL80 117 aa13.31□□□□□ -0.28
CTSB-202ENST00000353047 GAGE12GP0CL81 117 aa13.31□□□□□ -0.28
CTSB-202ENST00000353047 GAGE12IP0CL82 117 aa13.31□□□□□ -0.28
CTSB-202ENST00000353047 LINC00315P59091 139 aa13.31□□□□□ -0.28
CTSB-202ENST00000353047 RHOHQ15669 191 aa13.31□□□□□ -0.28
CTSB-202ENST00000353047 GAGE6Q13070 117 aa13.3□□□□□ -0.28
CTSB-202ENST00000353047 UBE2D3P61077 147 aa13.3□□□□□ -0.28
CTSB-202ENST00000353047 UBE2D2P62837 147 aa13.3□□□□□ -0.28
CTSB-202ENST00000353047 DEFB130BP0DP73 79 aa13.3□□□□□ -0.28
CTSB-202ENST00000353047 DEFB130AP0DP74 79 aa13.3□□□□□ -0.28
CTSB-202ENST00000353047 CCDC179H3BU77 68 aa13.29□□□□□ -0.28
CTSB-202ENST00000353047 POM121L12Q8N7R1 296 aa13.29□□□□□ -0.28
CTSB-202ENST00000353047 PAX4O43316 350 aa13.29□□□□□ -0.28
CTSB-202ENST00000353047 Q6ZSN1 163 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms